Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bda10g00531 ATGGCTAGTTCTGGCTCTCCTTGTGGCGCCTGCAAGTTTTTACGAAGAAAATGCGTCAGAGGCTGTGTTTTTGCTCCTTATTTCTGCCATGAACAAGGCGCTTCTCACTTTGCCGCCATTCACAAGGTCTTCGGAGCTAGCAATGTCTCCAAGCTTCTCGCCCATCTTCCCGTCTCCGAACGCTGCGAAGCTGCCGTTACGATCTCTTACGAAGCTCAGGCCCGCCTCCATGACCCGATTTACGGCTGCGTTTCTCATATCTTTGCTCTCCAACAGGAGGTTGTGAATTTGCAGGCGCAATTAACTTCTTTGAAAGAACAAGCTGCTCAAAGCATGTTCAACGGTTGTTCTACAGTAAACCCTGGTGAGAATTTTTGTGGGACATTTCCTCCTCAACCACAGGATCTTTCGAGTTTGGTGAAGTTGGAAAAATCAAGTGAAATGTCACAATTTCATCAGAATCTCTGCCATGCCAACTCTACAGTGCCATACTACAACGAGAAGAGCATTATGGAATCTTACTCTCTGGAGAATTTGTTCACTCCAGAAAAAAATCTCAGCTTGGGGGAGACCTCTAATTCCACATCTTCTTTTGAAATGCATTCCGGCAACAGACAGGAATGGAGTTTCGGAGATGTCGACGAGCTTCAGTCCATGGCTTTCGGCTATTTTCATCATTGA 681 46.26 MASSGSPCGACKFLRRKCVRGCVFAPYFCHEQGASHFAAIHKVFGASNVSKLLAHLPVSERCEAAVTISYEAQARLHDPIYGCVSHIFALQQEVVNLQAQLTSLKEQAAQSMFNGCSTVNPGENFCGTFPPQPQDLSSLVKLEKSSEMSQFHQNLCHANSTVPYYNEKSIMESYSLENLFTPEKNLSLGETSNSTSSFEMHSGNRQEWSFGDVDELQSMAFGYFHH 226
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
10 39045475 39046231 + Bda007410.1 Bda10g00531 14419
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bda10g00531 226 Coils Coil 87 107 - -
Bda10g00531 226 PANTHER LOB DOMAIN CONTAINING PROTEIN 1 225 - -
Bda10g00531 226 PANTHER LOB DOMAIN-CONTAINING PROTEIN 17-RELATED 1 225 - -
Bda10g00531 226 Pfam Lateral organ boundaries (LOB) domain 7 105 IPR004883 -
Bda10g00531 226 ProSiteProfiles LOB domain profile. 6 108 IPR004883 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g00898 Bda-Chr3:7849120 Bda10g00531 Bda-Chr10:39045475 8.40E-52 dispersed
Bda05g00845 Bda-Chr5:56998318 Bda10g00531 Bda-Chr10:39045475 3.22E-50 dispersed
Bda10g00531 Bda-Chr10:39045475 Bda11g01424 Bda-Chr11:18932366 5.40E-32 dispersed
Bda10g00531 Bda-Chr10:39045475 Bda08g00229 Bda-Chr8:2288572 6.62E-50 transposed
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
16500 PF03195 LOB 1.20E-35 No_clan Bda TF
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda10g00531 K13945 - vvi:100266975 287.73