Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda10g00533 ATGGTGGTTGCAAATTTGTCAACTATACATCCTATAGATTTGGAAGCTCCCGAAGGTGGAGTTGATGACATGACTAAGCTATCATATTTACATGAGCCAGGAGTGTTGCATAATTTGGCTGTTAGATATGAGTTGAATGAAATTTATACTTATTCAGGAAACATTCTCATTGCCCTCAATCCATTCCAAAGTCTACCATATTTGTATAATTCTTATGTGATGGAGCAGTATAAGGGCGCAACATCTGGAGAACTGAGTCCTCATGTCTTTGCTATTGCTGATGTTGCATATAGGTATCGTTTTGGAAAATTTGTTGAGATTCAGTTTGATAAAAATGGAAGAATATCAGGAGCTGCTATTAGAACTTATCTTCTTGAAAGATCTCGTGTTTGCCAAATATCGGATCCTGAAAGAAATTATCATTGCTTTTACCTTCTCTGTGCAGCTCCACCTCAGGAGAGAGAGAAATACAAGTTAGGAAATCATAAATCATTTCACTACCTAAACCAATCAAGTTGTTATGAATTACCTGGTGTAAATGATGCTCATGATTATCTTGCCACAAAGAGAGCCATGGATATAGTTGGAATAGGTGAAAAAGAACAGGATGCGATTTTTAAAGTTGTGGCTGCAATTCTACATCTCGGTAACATTGATTTTGCAACGAGAGATGAAAGTGATTCAGCAGTTCTCAAGGATGAGGAATCAAACTTCCACCTTCATGTGGCAGCAGAACTTCTTATGTGTGATCCTTATTCATTGGAAGAGGCATTGTGCAAGCGTCAAATGATAACTCCTGAGGAAATTATCATGAGAAGTCTTGATCCAGTTGGTGCGACAGTTAGCAGGGACGGCTTAGCGAAAACAATATATTCCCGTTTGTTTGATTGGTTGGTGGATAAAATCAACATCTCCATTGGGCAAGACCCTGGCTCAAATTGTCTGATTGGGGTCCTAGACATATATGGGTTTGAAAGCTTTAATACAAATAGCTTTGAGCAGTTCTGCATTAATTTAACAAACGAAAAGCTGCAACAACATTTCAACCAGCATGTATTCAAGATGGAACAAGAAGAATATACAAAAGAGGGTATTGATTGGAGTTACATTGAATTCATTGATAATCAAGATAAACCAGGTGGAATAATTTCTCTGCTTGATGAGGCTTGTATGTTTCCAAAGTCAAATCATGAAACTTTTTCACAAAAACTTTACCAGACATTTAAGAATCACAAGCGTTTCTTGAAGCCAAAGTTGGCGCGCACAGACTTCACCATTGTTCATTATGCAGGAGATGTTCAATATCAGTCTGACCAATTTTTAGATAAAAACAAAGATTATGTTGTTCCCGAGCATCAAAATTTATTGAGTGCTTCAAAATGTCCTTTTGTGGCATCTCTTTTCCCTCCACTGACTGAGGAGTCAGCCAAATCATCAAAATTTTCTTCAATTGGATCCCGTTTTAAACTACAACTACATCAATTGATGGATACGCTAAAGGCAACCGAACCACATTACATTAGATGTGTAAAGCCAAATAATTTCTTAAAACCTGCCATATTTGAGAATGCTGATGTCATTCAGCAACTACGTTCGGGTGGTGTTCTAGAGGCTGTTAGAATCAAATGCGCAGGATATCCAACATGCAGGACTTTCTTTGAATTTTTAACCCGTTTTGGAATCCTTGCTCCAGAGATATTGGAAGGGGAGATGATATATTGCATGTTAAACCAAATTTCAGAGCTGAAAATGATCATGCATCCGTCATCAGATTTGAATGCTATATGCAAACCCATTGCCAAGGATGTGTGCATTGATGCTGCTTCTAGTAGTAACTCTGACTCTTCATCGTCTGACTCTAATTTCACTTTTCCAATTCAATCTCCATCTATAACAGACTACTCTACCTTCAATCCGAATTCTTTTCAGCTAATAGTGCAAGATATTTCGACGGCAGATACATCAGGTCTGCACATGTACTGCAATTGA 1989 37.81 MVVANLSTIHPIDLEAPEGGVDDMTKLSYLHEPGVLHNLAVRYELNEIYTYSGNILIALNPFQSLPYLYNSYVMEQYKGATSGELSPHVFAIADVAYRYRFGKFVEIQFDKNGRISGAAIRTYLLERSRVCQISDPERNYHCFYLLCAAPPQEREKYKLGNHKSFHYLNQSSCYELPGVNDAHDYLATKRAMDIVGIGEKEQDAIFKVVAAILHLGNIDFATRDESDSAVLKDEESNFHLHVAAELLMCDPYSLEEALCKRQMITPEEIIMRSLDPVGATVSRDGLAKTIYSRLFDWLVDKINISIGQDPGSNCLIGVLDIYGFESFNTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTKEGIDWSYIEFIDNQDKPGGIISLLDEACMFPKSNHETFSQKLYQTFKNHKRFLKPKLARTDFTIVHYAGDVQYQSDQFLDKNKDYVVPEHQNLLSASKCPFVASLFPPLTEESAKSSKFSSIGSRFKLQLHQLMDTLKATEPHYIRCVKPNNFLKPAIFENADVIQQLRSGGVLEAVRIKCAGYPTCRTFFEFLTRFGILAPEILEGEMIYCMLNQISELKMIMHPSSDLNAICKPIAKDVCIDAASSSNSDSSSSDSNFTFPIQSPSITDYSTFNPNSFQLIVQDISTADTSGLHMYCN 662
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 39070163 39080659 - Bda007412.2 Bda10g00533 14421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda10g00533 662 Gene3D Kinesin motor domain 2 99 IPR036961 -
Bda10g00533 662 ProSiteProfiles Myosin motor domain profile. 19 662 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bda10g00533 662 Gene3D - 138 196 - -
Bda10g00533 662 Gene3D - 325 502 - -
Bda10g00533 662 SMART MYSc_2a 13 594 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bda10g00533 662 Gene3D Kinesin motor domain 100 541 IPR036961 -
Bda10g00533 662 PANTHER MYOSIN 100 570 - -
Bda10g00533 662 PANTHER MYOSIN 2 99 - -
Bda10g00533 662 PANTHER MYOSIN-9 100 570 - -
Bda10g00533 662 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 16 571 IPR027417 -
Bda10g00533 662 Pfam Myosin head (motor domain) 100 568 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bda10g00533 662 Pfam Myosin head (motor domain) 21 98 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bda10g00533 662 Gene3D Myosin VI head, motor domain, U50 subdomain 198 480 - -
Bda10g00533 662 PANTHER MYOSIN-9 2 99 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda10g00533 Bda-Chr10:39070163 Bda13g00031 Bda-Chr13:504384 1.76E-36 dispersed
Bda10g00533 Bda-Chr10:39070163 Bda07g01187 Bda-Chr7:14290412 4.19E-43 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda10g00533 K10357 - cpap:110817657 864.374