Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda10g00537 ATGCCGCGCTTTGATGATCGGAATCTCAGAGTGACGTCGGCGCTCGGTCGCGGAGCCAAAGGAGTGGTGTTTCTTGCTCGGAACGAGGAGGACGGTGAGTGGCTCGCTCTTAAGGTCATTTCTAGGGCTTTGATTGAGAGGAAGGGGAAATCTGAAACTGGCGATGGCCCCGAGTACAAGAGAGTCTGCTTTGAACGAGACGTTCTCCGCCGCTTTCGGCATCCTTTTTTGCCGAGGTTGGCTGGAATTTTTGAAACGGACAAAGTTGTGGGGTACGCTATTGATTATTGTCCTGGCCGTGATCTTAATTGTTTGAGGAAGAAGCAGACGGAGAAGATGTTCTCCGACGAATTCATTAGATTTTATGCGGTGGAATTGGTGATAACAATGGAGTATATTCACAGCTTAGGAATCGTGTACAGAGATCTGAAGCCAGAAAACATAATGATTCAAGAAAATGGCCATATAATGCTCGTAGATTTCGACCTCTCCACAACCTATCTGCCAAGACTCCAAAGTCTTCTCCTGCGAGAAAAGAATTTTCAATTTCTGACGGAGGAGTACGTGGCGCCGGAGATTGTTTCGGGTGCAGGCCACGATTTCGCAGTGGACTGGTGGTCCATGGGGGTAGTTCTGTACGAGATGCTATACGGAAAAACTCCGTTTCCGAGGATCAAACAGGAAGGAGACGTTCTACAGGATTTTAACAAAACGCCGGAGCTCACCGGCGAAGCGACGCCATTGAGAGACCTAATCAAGAAATTGCTGGAAAAGGACCCAAATGACAGAATTAAGCTCGAAGAAATCAAGGCTCACAACTACTTCGCTGGGGTAGAATGGGAGTCAATATATCAAATCTCACGTCCGCCATTTATCCCAGAAGACGAGAATCAGTGCGGGGAGTAA 906 47.9 MPRFDDRNLRVTSALGRGAKGVVFLARNEEDGEWLALKVISRALIERKGKSETGDGPEYKRVCFERDVLRRFRHPFLPRLAGIFETDKVVGYAIDYCPGRDLNCLRKKQTEKMFSDEFIRFYAVELVITMEYIHSLGIVYRDLKPENIMIQENGHIMLVDFDLSTTYLPRLQSLLLREKNFQFLTEEYVAPEIVSGAGHDFAVDWWSMGVVLYEMLYGKTPFPRIKQEGDVLQDFNKTPELTGEATPLRDLIKKLLEKDPNDRIKLEEIKAHNYFAGVEWESIYQISRPPFIPEDENQCGE 301
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 39188732 39189893 + Bda015186.1 Bda10g00537 14425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda10g00537 301 SMART serkin_6 9 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda10g00537 301 PANTHER FLIPPASE KINASE 1-RELATED 5 170 - -
Bda10g00537 301 PANTHER RHO-ASSOCIATED PROTEIN KINASE 1/2-RELATED 5 170 - -
Bda10g00537 301 PANTHER RHO-ASSOCIATED PROTEIN KINASE 1/2-RELATED 183 296 - -
Bda10g00537 301 PANTHER FLIPPASE KINASE 1-RELATED 183 296 - -
Bda10g00537 301 Gene3D Phosphorylase Kinase; domain 1 10 296 - -
Bda10g00537 301 ProSiteProfiles Protein kinase domain profile. 9 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda10g00537 301 Gene3D Transferase(Phosphotransferase) domain 1 101 294 - -
Bda10g00537 301 Pfam Protein kinase domain 12 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda10g00537 301 ProSitePatterns Serine/Threonine protein kinases active-site signature. 138 150 IPR008271 GO:0004672|GO:0006468
Bda10g00537 301 SUPERFAMILY Protein kinase-like (PK-like) 7 293 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda10g00537 Bda-Chr10:39188732 Bda10g00634 Bda-Chr10:40377022 0 dispersed
Bda10g00537 Bda-Chr10:39188732 Bda10g00538 Bda-Chr10:39191590 2.34E-111 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69854 PF00069 Pkinase 1.50E-57 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda10g00537 K20714 - zju:107426805 377.096