Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda10g00538 ATGTCCCGGCCTGTTAATTATCTCATCGATGAAGGGATGGATCGAGATCATTTTCTTTGTCTGCTTGTGAAAAAGTCGTCAACAATATCCGATAATATGCAATCCTATTGGTTTTTACTTCCTCCACTATCTGAAGGCAGGTCTCAAGGAAATTGCAATGCCGAACTCCAGAAGAGTTGTTTATCGTGTATTATCCTCCAAGAGCACAAGGCAAGCTGTAAGGGTGGAGCTATCAGGGTCATATTGAAAGCAGATCCGACCGCGATACTAGCGATGCTTTCAACCCATCCACTGGCTGTTGAGGAAATGAAAGATCTGGAGCTGTTTCCTTGCTCTGCTCGGCACTATGAAAGAGACCACTTGTGCGCAAAACCCATGAAAAATTGTGTTGCCATCCTCTATGCCATCGGTTTTTATGACCGACAAATGAAGGAAATAAGGGCACGAACGGACAAAGTTGTGGGGTACGCTATTGATTATTGTCCTGGCCGTGATCTTAATTGTTTGAGGAAGAAGCAGACGGAGAAGATGTTCTCCGACGAATTCATTAGATTTTATGCGGTGGAATTGGTGATAACAATGGAGTATATTCACAGCTTAGGAATCGTGTACAGAGATCTGAAGCCAGAAAACATAATGATTCAAGAAAATGGCCATATAATGCTCGTAGATTTCGACCTCTCCACAAACCTATCTGCCAAGACTCCAAAGTCTTCTCCTGCGAGAAAAGAATTTTCAATTTCTGACGCCGTGAAGACGAAGCGATTCTTGTCTTTCAGCCGATTATGCAACTCTGGCATTTCACCTGAAGATTCAGCTCCTCCTCCTCGGCACATTCTCCCACACAGCGACGACTCTTCTCAAAACGAATCAAACTCCTCCGAGAAATCAAACTCCTTCGTCGGAACAGAGGAGTACGTGGCGCCGGAGATTGTTTCGGGTGCAGGCCACGATTTCGCAGTGGACTGGTGGTCCATGGGGGTAGTTCTGTACGAGATGCTATACGGAAAAACTCCGTTCCGAGGATCAAACAGGAAGGAGACGTTCTACAGGATTTTAACAAAAACGCCGGAGCTCACCGGCGAAGCGACGCCATTGAGAGACCTAATCAAGAAATTGCTGGAAAAGGACCCAAATGACAGAATTAAGCTCGAAGAAATCAAGGCTCACAACTACTTCGCTGGGGTAGAATGGGAGTCAATATATCAAATCTCACGTCCGCCATTTATCCCAGAAGACGAGATCAGTGCGGTGGATGTAAATAACAGAGTAGACGTGGAGATTTACGTCCATGAAATATTCTGCAACCGCAGTGAGGTAGGGGTAGACTGCAATAAATACGAAAAGGAAACTAAAGCGATGATGGTGAATGCACATGCAACTAATCCCAATCCTGATCTTCGTCTTCTTCCCTCTGAAACTGATACATTTCATGTCTTCTAG 1443 44.98 MSRPVNYLIDEGMDRDHFLCLLVKKSSTISDNMQSYWFLLPPLSEGRSQGNCNAELQKSCLSCIILQEHKASCKGGAIRVILKADPTAILAMLSTHPLAVEEMKDLELFPCSARHYERDHLCAKPMKNCVAILYAIGFYDRQMKEIRARTDKVVGYAIDYCPGRDLNCLRKKQTEKMFSDEFIRFYAVELVITMEYIHSLGIVYRDLKPENIMIQENGHIMLVDFDLSTNLSAKTPKSSPARKEFSISDAVKTKRFLSFSRLCNSGISPEDSAPPPRHILPHSDDSSQNESNSSEKSNSFVGTEEYVAPEIVSGAGHDFAVDWWSMGVVLYEMLYGKTPFRGSNRKETFYRILTKTPELTGEATPLRDLIKKLLEKDPNDRIKLEEIKAHNYFAGVEWESIYQISRPPFIPEDEISAVDVNNRVDVEIYVHEIFCNRSEVGVDCNKYEKETKAMMVNAHATNPNPDLRLLPSETDTFHVF 480
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 39191590 39202727 - Bda015187.1 Bda10g00538 14426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda10g00538 480 SMART serkin_6 87 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda10g00538 480 MobiDBLite consensus disorder prediction 267 300 - -
Bda10g00538 480 Gene3D Transferase(Phosphotransferase) domain 1 113 258 - -
Bda10g00538 480 ProSitePatterns Serine/Threonine protein kinases active-site signature. 202 214 IPR008271 GO:0004672|GO:0006468
Bda10g00538 480 ProSiteProfiles Protein kinase domain profile. 66 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda10g00538 480 PANTHER FLIPPASE KINASE 1-RELATED 149 443 - -
Bda10g00538 480 Gene3D Transferase(Phosphotransferase) domain 1 290 412 - -
Bda10g00538 480 MobiDBLite consensus disorder prediction 285 300 - -
Bda10g00538 480 SUPERFAMILY Protein kinase-like (PK-like) 151 429 IPR011009 -
Bda10g00538 480 ProSiteProfiles AGC-kinase C-terminal domain profile. 394 480 IPR000961 GO:0004674|GO:0005524|GO:0006468
Bda10g00538 480 Pfam Protein kinase domain 155 247 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda10g00538 480 Pfam Protein kinase domain 291 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda10g00538 480 PANTHER RHO-ASSOCIATED PROTEIN KINASE 1/2-RELATED 149 443 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda04g00641 Bda-Chr4:55169062 Bda10g00538 Bda-Chr10:39191590 2.53E-155 dispersed
Bda10g00538 Bda-Chr10:39191590 Bda10g00634 Bda-Chr10:40377022 0 dispersed
Bda10g00537 Bda-Chr10:39188732 Bda10g00538 Bda-Chr10:39191590 2.34E-111 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69855 PF00069 Pkinase 2.70E-24 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda10g00538 K20714 - jre:109008503 385.571