Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda10g00545 | ATGGCCGAGGTTTTCCAAGGCCAGCCAATTACCAGCAATGTTGCTGGAGCACCACATCCTCCAGCAATGCGACCAAGAGTAAGAGCTAGACGAGGACAAGCTACAGATCCCCATAGTATAGCTGAAAGGTTGCGCAGAGAAAGAATTGCAGAGAGGATCAGGGCATTGCAGGAACTGGTTCCTAGTGTCAACAAGACAGATAGAGCTGCCATGCTTGATGAAATAGTAGATTATGTAAAGTTTCTGCGCCTCCAAGTGAAGGTTTTAAGCATAAGTAGATTGGGAGGTGCTGGGGCAGTAGCACCTCTTGTAACTGACATTCCATTATCATCACTGGAGGACGATGGAAGTGAAGGCGGAAGAAATCAACCAGCCTGGGAAAAGTGGTCAAATGATGGCACAGAAAGACAAGTAGCTAAGCTTATGGAAGAAAATGTTGGTGCTGCCATGCAATTTCTTCAGTCCAAGGCTCTTTGCATCATGCCCATCTCCTTGGCCTCAGCAATCTACCACACGCAACCAGCCGACACATCCAGTGTGGTCAAGCCTGAGACAAACCCACCTTCCTAG | 570 | 48.07 | MAEVFQGQPITSNVAGAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSISRLGGAGAVAPLVTDIPLSSLEDDGSEGGRNQPAWEKWSNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLASAIYHTQPADTSSVVKPETNPPS | 189 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 39329297 | 39332935 | - | Bda015196.1 | Bda10g00545 | 14433 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda10g00545 | 189 | PANTHER | TRANSCRIPTION FACTOR UNE12 ISOFORM X1 | 2 | 179 | - | - | |
Bda10g00545 | 189 | MobiDBLite | consensus disorder prediction | 113 | 132 | - | - | |
Bda10g00545 | 189 | Gene3D | - | 28 | 89 | IPR036638 | GO:0046983 | |
Bda10g00545 | 189 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 31 | 91 | IPR036638 | GO:0046983 | |
Bda10g00545 | 189 | MobiDBLite | consensus disorder prediction | 1 | 37 | - | - | |
Bda10g00545 | 189 | PANTHER | TRANSCRIPTION FACTOR BHLH83-RELATED | 2 | 179 | - | - | |
Bda10g00545 | 189 | Pfam | Helix-loop-helix DNA-binding domain | 38 | 82 | IPR011598 | GO:0046983 | |
Bda10g00545 | 189 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 33 | 82 | IPR011598 | GO:0046983 | |
Bda10g00545 | 189 | SMART | finulus | 39 | 88 | IPR011598 | GO:0046983 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda07g01202 | Bda-Chr7:14414824 | Bda10g00545 | Bda-Chr10:39329297 | 8.77E-85 | dispersed | |
Bda10g00545 | Bda-Chr10:39329297 | Bda12g00371 | Bda-Chr12:4266003 | 4.27E-86 | dispersed | |
Bda10g00545 | Bda-Chr10:39329297 | Bda04g00536 | Bda-Chr4:53987459 | 5.57E-117 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
16501 | PF00010 | HLH | 5.10E-08 | No_clan | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda10g00545 | - | - | twl:120008096 | 315.079 |