Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda10g00557 ATGGGTAATTCTGATTTCGTTTACCCTTCTGCCATGAACGTCGAGTGTGCACATAGAGTGGCGGTTCCTCCGCCGCAGCCATTTGTCAAGTCTTTGAAGAACTCACTGAAAGAAACCTTTTTCCCCGACGACCCACTCAGACAGTTCAAAAACCAGCCTGTTGCGAGAAAATTACTTCTGGGTTTTCAGTATTTCTTTCCGATTCTTGAGTGGGCTCCGCGTTACACCTTCGACTTCTTCAAAGCTGATCTCATTTCTGGAATCACCATTGCCAGCCTCGCCATTCCTCAGGGCATAAGCTACGCCAAGCTAGCCAACTTACCGCCTATTCTCGGCCTATATTCGAGTTTTATTCCTCCTTTGGTGTATGCAATGATGGGTAGTTCGAGAGATTTAGCAGTTGGAACAGTGGCTGTTGCTTCTCTCCTCATAGCTTCCATGCTTGGACGTGAGGTTAATGCTATGGAGAATCCCAAGCTTTACCTCCATCTTGCTTTAACATCAACGTTTTTCTCAGGAGTTTTCCAGGCTTTATTGGGTTTATTAAGGCTAGGTTTTATAGTGGATTTTCTGTCACACGCGACGATAGTAGGGTTCATGGCAGGAGCAGCAACAGTTGTTTGCCTGCAACAGCTGAAAGGAGTTCTTGGGCTTGTACATTTCACCCATGGCACTGACCTTGTCTCTGTTATGCGTTCTGTCTTCTCCCAAGTTCATCAGTGGCGATGGGAAAGCGGCGTTCTGGGCTGCGGTTTCCTGTTCTTCCTCATCAGCACAAGATACGTAAGCAAGAAAAGGCCAAGATTCTTCTGGATATCGGCCATGGCTCCTCTGACGTCGGTGATCTTGGGAAGCCTCCTCGTTTACCTCACCCATGCAGAGAAACATGGAGTTCAAGTGATAGGGAACCTCAAGAAAGGGCTGAATCCACCGTCCGTCACGGATCTAATTTTCACTGGGCCTTATCTGACGATTGTGATTAAAACTGGAATCATCACTGGGGTCATTGCTCTAGCTGAAGGAATAGCAGTAGGAAGAAGCTTTGCAATGTTCAAAAACTACAACATCGATGGGAACAAAGAGATGGTCGCCATTGGAACTATGAACATCGTTGGTTCCTTCACCTCTTGTTACCTCGCAACAGGCCCGTTTTCAAGGTCGGCGGTGAACTATAACGCCGGATGCAAGACGGCGGTTTCTAACATTGTAATGGCGATCGCGGTGATGTTTACATTGTTGTTTTTAACGCCATTGTTCCATTATACTCCTCTGGTGGTTCTGTCCGCCATTATCATCTCTGCGATGCTGGGTCTCATCGATTACGAGGCCGCTATTCATCTCTGGAAGGTCGATAAGTTTGATTTCCTAGTTTGTATTGGTGCTTATCTTGGAGTAGTCTTTGGAAGCGTAGAAATGGGCCTGGTTATTGCGGTTGTACTGTCTGTGCTTAGAGTATTACTTTTCATTGCGAGGCCAAGAACTTGTGTTCTTGGTAATATTCCCAATTCCATGATTTTCAGAAACGTTGAACAATATCCTAATTTAAGCAATGTTCCTGGAGTTCTTATCCTTGAAATTGATGCTCCAATTTACTTTGCAAATTCAAGCTACTTAAGAGAAAGGATTACAAGGTGGATCGATGAAGAAGAAGACAGGATAAAATCTTCCGGAGAAATTAGTTTGCAGTACGTTGTATTAGATATGAGCGCTGTTGGTAATATTGATACGAGTGGAATAAGCATGATGGAAGAGGTCAAGAAGCTTATTGATAGAAGAGGGCTTAAGCTTGCTTTGGCCAATCCTGGAGGAGAGGTCATGAAGAAGCTCAACAAATCAAAGTTCTTAGACAACATAGGTCAAGAATGGATCTACCTCACAGTGGGGGAAGCCGTAGCTGCCTGCAATTACATGCTTCACACTTGCAAGCCGAATTCCGAGAAAGGCGAAGCCGAGGCTTGGAATAGCGTCTAA 1971 45.15 MGNSDFVYPSAMNVECAHRVAVPPPQPFVKSLKNSLKETFFPDDPLRQFKNQPVARKLLLGFQYFFPILEWAPRYTFDFFKADLISGITIASLAIPQGISYAKLANLPPILGLYSSFIPPLVYAMMGSSRDLAVGTVAVASLLIASMLGREVNAMENPKLYLHLALTSTFFSGVFQALLGLLRLGFIVDFLSHATIVGFMAGAATVVCLQQLKGVLGLVHFTHGTDLVSVMRSVFSQVHQWRWESGVLGCGFLFFLISTRYVSKKRPRFFWISAMAPLTSVILGSLLVYLTHAEKHGVQVIGNLKKGLNPPSVTDLIFTGPYLTIVIKTGIITGVIALAEGIAVGRSFAMFKNYNIDGNKEMVAIGTMNIVGSFTSCYLATGPFSRSAVNYNAGCKTAVSNIVMAIAVMFTLLFLTPLFHYTPLVVLSAIIISAMLGLIDYEAAIHLWKVDKFDFLVCIGAYLGVVFGSVEMGLVIAVVLSVLRVLLFIARPRTCVLGNIPNSMIFRNVEQYPNLSNVPGVLILEIDAPIYFANSSYLRERITRWIDEEEDRIKSSGEISLQYVVLDMSAVGNIDTSGISMMEEVKKLIDRRGLKLALANPGGEVMKKLNKSKFLDNIGQEWIYLTVGEAVAACNYMLHTCKPNSEKGEAEAWNSV 656
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 39538278 39542706 - Bda015214.1 Bda10g00557 14445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda10g00557 656 ProSiteProfiles STAS domain profile. 511 634 IPR002645 -
Bda10g00557 656 TIGRFAM sulP: sulfate permease 67 630 IPR001902 GO:0015301|GO:0016020|GO:0055085
Bda10g00557 656 Gene3D STAS domain 491 636 IPR036513 -
Bda10g00557 656 Pfam STAS domain 512 630 IPR002645 -
Bda10g00557 656 PANTHER SLC26A/SULP TRANSPORTER-RELATED 2 653 - -
Bda10g00557 656 ProSitePatterns SLC26A transporters signature. 109 130 IPR018045 GO:0008271|GO:0008272
Bda10g00557 656 CDD STAS_SulP_like_sulfate_transporter 512 627 - -
Bda10g00557 656 PANTHER SULFATE TRANSPORTER 2 653 IPR001902 GO:0015301|GO:0016020|GO:0055085
Bda10g00557 656 Pfam Sulfate permease family 80 459 IPR011547 GO:0016021
Bda10g00557 656 SUPERFAMILY SpoIIaa-like 513 634 IPR036513 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda04g00854 Bda-Chr4:58397111 Bda10g00557 Bda-Chr10:39538278 0 dispersed
Bda10g00557 Bda-Chr10:39538278 Bda12g00009 Bda-Chr12:68625 0 dispersed
Bda10g00557 Bda-Chr10:39538278 Bda03g00872 Bda-Chr3:7564021 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda10g00557 K17471 - qsu:112027234 1134.78