Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda10g00567 ATGGCGAACAAAGCTCAAATCCCCACTAGAAACACTTCACTTATTGCCATGATAGCTGATGAGGACACCGTAGTTGGATTTCTACTGGCTGGAGTTGGTAATGTTGACCTGAGAAGAAAGACAAATTATCTCATTGTGAATTCAAAAACAACTGTTAAACAAATTGAAGATGCATTCAAGGAGTTCACAACAAGAGAGGATGTTGCTGTAGTGCTTATCAGCCAATATGTTGCAAACATGGTGAGATTTTTGGTGGATAGCTACAATAAACCCATTCCAGCCATTCTGGAGATTCCATCAAAAAATCATCCTTATGATCACACCCAAGACTCCATCCTATCAAGAGTGAAGCATCTCTTTTCTGCCGAGTCGGTGGCATCGGGAAGGCGCTGA 393 41.73 MANKAQIPTRNTSLIAMIADEDTVVGFLLAGVGNVDLRRKTNYLIVNSKTTVKQIEDAFKEFTTREDVAVVLISQYVANMVRFLVDSYNKPIPAILEIPSKNHPYDHTQDSILSRVKHLFSAESVASGRR 130
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 39661391 39665661 + Bda015224.1 Bda10g00567 14455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda10g00567 130 Pfam ATP synthase (F/14-kDa) subunit 15 116 IPR008218 GO:0034220|GO:0046961
Bda10g00567 130 Gene3D ATPase, V1 complex, subunit F 9 122 IPR036906 GO:0034220
Bda10g00567 130 SUPERFAMILY AtpF-like 15 118 IPR036906 GO:0034220
Bda10g00567 130 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT F 1 130 - -
Bda10g00567 130 TIGRFAM V_ATP_synt_F: V-type ATPase, F subunit 11 124 IPR005772 GO:0033180|GO:0046961|GO:1902600
Bda10g00567 130 PIRSF V-ATP_synth_F 3 123 IPR005772 GO:0033180|GO:0046961|GO:1902600
Bda10g00567 130 PANTHER V-TYPE PROTON ATPASE SUBUNIT F 1 130 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda10g00546 Bda-Chr10:39334898 Bda10g00567 Bda-Chr10:39661391 9.68E-93 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda10g00567 K02151 - csin:114282909 231.876