Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda10g00636 | ATGGATTCTGCAAGGAATTGGTTTCAAAAGCTCCAACCACGAGATAAGTTAAGGACCTTATCAAAGAAAAGGGATCCTGATGGTGGAGATGACGAAGAGTCAAAGGTGTCAGCTGATGAGGAAGCTCTATCTAATACTACAAAACAGAAGGTTGCAGCAGCAAAGCAGTATATTGAGAATCACTACAAGGAGCAAATGAAGAACCTGCAGGAGAGAAAAGAACGACGAAATATCTTGGAAAAGAAGTTGGAAGATGCTGATGTTTCTGAGGAAGATCAGAACAATCTACTCAAATTTTTGGAGAAGAAGGAAACAGAATATATGAGGCTTCAAAGGCACAAAATGGGTGCAGATGATTTTGAGTTGTTGACAATGATTGGAAAAGGCGCTTTTGGAGAGGTATTTAGAAGTTTTGTTCATGTTCGAGTTTGTAAGGAGAAAACAACGGGTCAAGTATATGCTATGAAAAAGCTAAAGAAATCAGAGATGCTTCGAAGGGGCCAGGTCGAGCATGTGAAAGCTGAGAGAAATTTGCTCGCTGAGGTGGAGAGTAACTGCATTGTCAAACTGTACTGTTCTTTTCAAGATGATGACTATCTTTATCTTATCATGGAATATCTACCTGGTGGAGATATGATGACTTTGCTTATGAGGAAAGACACTTTGACTGAGGATGAAGCCAGATTTTATGTTGCACAAACAATTTTAGCTATTGAATCTATCCATAAACGCAATTACATTCATAGAGATATCAAGCCTGACAACTTGTTGCTTGATCAATATGGACACCTAAGACTATCAGATTTTGGACTGTGTAAACCCTTGGACTGCAGCACGCTCCAAGAACAAAATTTTTCAGTTGGTAACAATTCTAAAGGGTCTGGACCAAATGATGAAGGCTCTGTGGGTCCTAAGCGCACACAACAAGAACAACTACAACATTGGCAAAAGAATCGAAGAATGCTTGCTTATTCTACTGTGGGCACACCAGATTATATAGCTCCTGAGGTTCTATTGAAGAAGGGCTATGGATTGGAATGTGATTGGTGGTCACTTGGTGCTATAATGTACGAGATGCTTGTTGGCTATCCACCTTTTTATTCGGATGATCCAATGTCAACATGTAGGAAGATAGTTAACTGGAGGACTCATTTGAAGTTCCCTGAAGAAGCAAAGTTATCTCCAGAAGCAAAAGATCTTATTAGTAAGCTCTTGTGTAATGTTGGCCAGAGACTAGGGTCAAAAGGTGCATTTGAAATTAAGGCCCATACATGGTTTGAAGGTACCGAATGGGATAAGCTCTATCAAATGGAAGCTGCATTTATTCCTGCGGTTAATGATGAGCTGGATACCCAAAATTTTGAAAAGTTTGAAGAGCTTGACAACCAGAATCAGCCGTCATCCAAAACTGGTCCTTGGAGAAAGATGCTCTCATCTAAGGATATCAACTTTGTTGGCTACACATACAAGAACTTTGAGATTGTAAATGATTATCAATTGCCTGGGATGGCTGAGCTGAAGAAAAAAAGCACCAAACCGAGAAGACCATCCATCAAGTCACTTTTC | 1566 | 39.91 | MDSARNWFQKLQPRDKLRTLSKKRDPDGGDDEESKVSADEEALSNTTKQKVAAAKQYIENHYKEQMKNLQERKERRNILEKKLEDADVSEEDQNNLLKFLEKKETEYMRLQRHKMGADDFELLTMIGKGAFGEVFRSFVHVRVCKEKTTGQVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVESNCIVKLYCSFQDDDYLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAQTILAIESIHKRNYIHRDIKPDNLLLDQYGHLRLSDFGLCKPLDCSTLQEQNFSVGNNSKGSGPNDEGSVGPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGLECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLCNVGQRLGSKGAFEIKAHTWFEGTEWDKLYQMEAAFIPAVNDELDTQNFEKFEELDNQNQPSSKTGPWRKMLSSKDINFVGYTYKNFEIVNDYQLPGMAELKKKSTKPRRPSIKSLF | 522 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 40402956 | 40415070 | + | Bda033430 | Bda10g00636 | 14524 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda10g00636 | 522 | Pfam | Protein kinase C terminal domain | 445 | 489 | IPR017892 | GO:0004674|GO:0005524|GO:0006468 | |
Bda10g00636 | 522 | MobiDBLite | consensus disorder prediction | 9 | 31 | - | - | |
Bda10g00636 | 522 | CDD | STKc_NDR_like | 118 | 490 | - | - | |
Bda10g00636 | 522 | MobiDBLite | consensus disorder prediction | 286 | 309 | - | - | |
Bda10g00636 | 522 | ProSiteProfiles | Protein kinase domain profile. | 120 | 426 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda10g00636 | 522 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 246 | 258 | IPR008271 | GO:0004672|GO:0006468 | |
Bda10g00636 | 522 | PANTHER | SERINE/THREONINE-PROTEIN KINASE | 24 | 522 | - | - | |
Bda10g00636 | 522 | Gene3D | Transferase(Phosphotransferase) domain 1 | 325 | 444 | - | - | |
Bda10g00636 | 522 | SMART | pkinase_C_6 | 427 | 491 | IPR000961 | GO:0004674|GO:0005524|GO:0006468 | |
Bda10g00636 | 522 | Coils | Coil | 62 | 89 | - | - | |
Bda10g00636 | 522 | Gene3D | Phosphorylase Kinase; domain 1 | 445 | 455 | - | - | |
Bda10g00636 | 522 | Pfam | Protein kinase domain | 121 | 426 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda10g00636 | 522 | ProSiteProfiles | AGC-kinase C-terminal domain profile. | 427 | 499 | IPR000961 | GO:0004674|GO:0005524|GO:0006468 | |
Bda10g00636 | 522 | PANTHER | NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE | 24 | 522 | - | - | |
Bda10g00636 | 522 | MobiDBLite | consensus disorder prediction | 1 | 48 | - | - | |
Bda10g00636 | 522 | SMART | serkin_6 | 120 | 426 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda10g00636 | 522 | ProSitePatterns | Protein kinases ATP-binding region signature. | 126 | 156 | IPR017441 | GO:0005524 | |
Bda10g00636 | 522 | Gene3D | Transferase(Phosphotransferase) domain 1 | 211 | 277 | - | - | |
Bda10g00636 | 522 | SUPERFAMILY | Protein kinase-like (PK-like) | 93 | 477 | IPR011009 | - | |
Bda10g00636 | 522 | Gene3D | Phosphorylase Kinase; domain 1 | 118 | 210 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda08g01356 | Bda-Chr8:53936854 | Bda10g00636 | Bda-Chr10:40402956 | 0 | dispersed | |
Bda09g01078 | Bda-Chr9:41201901 | Bda10g00636 | Bda-Chr10:40402956 | 0 | dispersed | |
Bda09g01079 | Bda-Chr9:41210689 | Bda10g00636 | Bda-Chr10:40402956 | 0 | dispersed | |
Bda10g00636 | Bda-Chr10:40402956 | Bda09g01486 | Bda-Chr9:46684330 | 2.74E-48 | dispersed | |
Bda02g00487 | Bda-Chr2:45741741 | Bda10g00636 | Bda-Chr10:40402956 | 0 | transposed | |
Bda08g00275 | Bda-Chr8:2863373 | Bda10g00636 | Bda-Chr10:40402956 | 0 | transposed | |
Bda15g00561 | Bda-Chr15:8745370 | Bda10g00636 | Bda-Chr10:40402956 | 1.63E-08 | transposed | |
Bda10g00636 | Bda-Chr10:40402956 | Bda04g00643 | Bda-Chr4:55190617 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
69858 | PF00069 | Pkinase | 2.50E-61 | CL0016 | Bda | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda10g00636 | K08790 | - | jre:108982626 | 922.539 |