Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda10g00636 ATGGATTCTGCAAGGAATTGGTTTCAAAAGCTCCAACCACGAGATAAGTTAAGGACCTTATCAAAGAAAAGGGATCCTGATGGTGGAGATGACGAAGAGTCAAAGGTGTCAGCTGATGAGGAAGCTCTATCTAATACTACAAAACAGAAGGTTGCAGCAGCAAAGCAGTATATTGAGAATCACTACAAGGAGCAAATGAAGAACCTGCAGGAGAGAAAAGAACGACGAAATATCTTGGAAAAGAAGTTGGAAGATGCTGATGTTTCTGAGGAAGATCAGAACAATCTACTCAAATTTTTGGAGAAGAAGGAAACAGAATATATGAGGCTTCAAAGGCACAAAATGGGTGCAGATGATTTTGAGTTGTTGACAATGATTGGAAAAGGCGCTTTTGGAGAGGTATTTAGAAGTTTTGTTCATGTTCGAGTTTGTAAGGAGAAAACAACGGGTCAAGTATATGCTATGAAAAAGCTAAAGAAATCAGAGATGCTTCGAAGGGGCCAGGTCGAGCATGTGAAAGCTGAGAGAAATTTGCTCGCTGAGGTGGAGAGTAACTGCATTGTCAAACTGTACTGTTCTTTTCAAGATGATGACTATCTTTATCTTATCATGGAATATCTACCTGGTGGAGATATGATGACTTTGCTTATGAGGAAAGACACTTTGACTGAGGATGAAGCCAGATTTTATGTTGCACAAACAATTTTAGCTATTGAATCTATCCATAAACGCAATTACATTCATAGAGATATCAAGCCTGACAACTTGTTGCTTGATCAATATGGACACCTAAGACTATCAGATTTTGGACTGTGTAAACCCTTGGACTGCAGCACGCTCCAAGAACAAAATTTTTCAGTTGGTAACAATTCTAAAGGGTCTGGACCAAATGATGAAGGCTCTGTGGGTCCTAAGCGCACACAACAAGAACAACTACAACATTGGCAAAAGAATCGAAGAATGCTTGCTTATTCTACTGTGGGCACACCAGATTATATAGCTCCTGAGGTTCTATTGAAGAAGGGCTATGGATTGGAATGTGATTGGTGGTCACTTGGTGCTATAATGTACGAGATGCTTGTTGGCTATCCACCTTTTTATTCGGATGATCCAATGTCAACATGTAGGAAGATAGTTAACTGGAGGACTCATTTGAAGTTCCCTGAAGAAGCAAAGTTATCTCCAGAAGCAAAAGATCTTATTAGTAAGCTCTTGTGTAATGTTGGCCAGAGACTAGGGTCAAAAGGTGCATTTGAAATTAAGGCCCATACATGGTTTGAAGGTACCGAATGGGATAAGCTCTATCAAATGGAAGCTGCATTTATTCCTGCGGTTAATGATGAGCTGGATACCCAAAATTTTGAAAAGTTTGAAGAGCTTGACAACCAGAATCAGCCGTCATCCAAAACTGGTCCTTGGAGAAAGATGCTCTCATCTAAGGATATCAACTTTGTTGGCTACACATACAAGAACTTTGAGATTGTAAATGATTATCAATTGCCTGGGATGGCTGAGCTGAAGAAAAAAAGCACCAAACCGAGAAGACCATCCATCAAGTCACTTTTC 1566 39.91 MDSARNWFQKLQPRDKLRTLSKKRDPDGGDDEESKVSADEEALSNTTKQKVAAAKQYIENHYKEQMKNLQERKERRNILEKKLEDADVSEEDQNNLLKFLEKKETEYMRLQRHKMGADDFELLTMIGKGAFGEVFRSFVHVRVCKEKTTGQVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVESNCIVKLYCSFQDDDYLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAQTILAIESIHKRNYIHRDIKPDNLLLDQYGHLRLSDFGLCKPLDCSTLQEQNFSVGNNSKGSGPNDEGSVGPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGLECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLCNVGQRLGSKGAFEIKAHTWFEGTEWDKLYQMEAAFIPAVNDELDTQNFEKFEELDNQNQPSSKTGPWRKMLSSKDINFVGYTYKNFEIVNDYQLPGMAELKKKSTKPRRPSIKSLF 522
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 40402956 40415070 + Bda033430 Bda10g00636 14524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda10g00636 522 Pfam Protein kinase C terminal domain 445 489 IPR017892 GO:0004674|GO:0005524|GO:0006468
Bda10g00636 522 MobiDBLite consensus disorder prediction 9 31 - -
Bda10g00636 522 CDD STKc_NDR_like 118 490 - -
Bda10g00636 522 MobiDBLite consensus disorder prediction 286 309 - -
Bda10g00636 522 ProSiteProfiles Protein kinase domain profile. 120 426 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda10g00636 522 ProSitePatterns Serine/Threonine protein kinases active-site signature. 246 258 IPR008271 GO:0004672|GO:0006468
Bda10g00636 522 PANTHER SERINE/THREONINE-PROTEIN KINASE 24 522 - -
Bda10g00636 522 Gene3D Transferase(Phosphotransferase) domain 1 325 444 - -
Bda10g00636 522 SMART pkinase_C_6 427 491 IPR000961 GO:0004674|GO:0005524|GO:0006468
Bda10g00636 522 Coils Coil 62 89 - -
Bda10g00636 522 Gene3D Phosphorylase Kinase; domain 1 445 455 - -
Bda10g00636 522 Pfam Protein kinase domain 121 426 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda10g00636 522 ProSiteProfiles AGC-kinase C-terminal domain profile. 427 499 IPR000961 GO:0004674|GO:0005524|GO:0006468
Bda10g00636 522 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 24 522 - -
Bda10g00636 522 MobiDBLite consensus disorder prediction 1 48 - -
Bda10g00636 522 SMART serkin_6 120 426 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda10g00636 522 ProSitePatterns Protein kinases ATP-binding region signature. 126 156 IPR017441 GO:0005524
Bda10g00636 522 Gene3D Transferase(Phosphotransferase) domain 1 211 277 - -
Bda10g00636 522 SUPERFAMILY Protein kinase-like (PK-like) 93 477 IPR011009 -
Bda10g00636 522 Gene3D Phosphorylase Kinase; domain 1 118 210 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda08g01356 Bda-Chr8:53936854 Bda10g00636 Bda-Chr10:40402956 0 dispersed
Bda09g01078 Bda-Chr9:41201901 Bda10g00636 Bda-Chr10:40402956 0 dispersed
Bda09g01079 Bda-Chr9:41210689 Bda10g00636 Bda-Chr10:40402956 0 dispersed
Bda10g00636 Bda-Chr10:40402956 Bda09g01486 Bda-Chr9:46684330 2.74E-48 dispersed
Bda02g00487 Bda-Chr2:45741741 Bda10g00636 Bda-Chr10:40402956 0 transposed
Bda08g00275 Bda-Chr8:2863373 Bda10g00636 Bda-Chr10:40402956 0 transposed
Bda15g00561 Bda-Chr15:8745370 Bda10g00636 Bda-Chr10:40402956 1.63E-08 transposed
Bda10g00636 Bda-Chr10:40402956 Bda04g00643 Bda-Chr4:55190617 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69858 PF00069 Pkinase 2.50E-61 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda10g00636 K08790 - jre:108982626 922.539