Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda10g00656 ATGAAGGACCTCGACATTAACGCAGAGAAACTTCTTACCAAGGATTTTTTATCTCATTTCGCTGATGCAAACGGTGAAGCTAAATACGTGAATATCCTGCAAGAGGTTGCGAACCGGAAGGTCCGTGCAGTGTATATTGATCTCGAAGATCTTTTCAATTATAAAGATTTAGATGAGGAATTTCTCAAACGAATTACGGAGAACACACGAAGGTATATTGGAATTTTTGCAGATGTCATTGATGAGCTAATGCCTGAGCCAACAGAGGCATTTGCAGACGATGATCACGACATATTAATGACCCAAAGGTCTGACGATGGACCTGATAATGTGGACGGATCAGATCCATTTCAAAAAATGCCTCCAGAAATCAAGCGCTACTTTGAAGTTTACATTAGAGCATCTTCAAAGGGTCGCCCTTTCACTATTAGGGAGGTCAGGGCTTCACATATTGGCCAGCTTGTAAGGATATCTGGAATAGTGACACGATGCTCTGATGTTAAGCCACTAATGAGAGTAGCTGTGTACACATGCGAGAATTGTGGTTTTGAGATTTACCAGGAAGTAACAGCCCGAGTTTTCATGCCCCTCTTTGTGTGTCCATCAAGGCGGTGTATAACAAATAGATCGAAAGGAAATCTTATCCTCCAACTAAGAGCATCAAAATTTTTGAAGTTTCAGGAGGCCAAAATTCAGGAGTTAGCTGAACATGTTCCTAAAGGTCATATTCCTCGAACAATGACCGTTCATTTTAGGGGCGAGCTCACTAGGAAGGTTGCTCCAGGTGATGTTGTTGAGTTATCTGGTATTTTTCTCCCTATACCTTACACTGGCTTTAGGGCAATGCGCGCCGGTCTGGTTGCTGATACTTACTTGGAAGCAATGTCTATCAACCATTTCAAGAAAAAATATGAGGAATATGAACTCAAAGGAGGCGAGGCTGATCTAATTGCAAACTTGGCAGAGAGTGGTGATATATATAACAAGTTGGCACGTTCTTTGGCCCCTGAAATTTTTGGGCATGAAGACATCAAAAAAGCATTGCTTCTTCTTCTAGTCAGTGCCCCTCACAGAAAGTTGAAAGATGGAATGAAGATTAGAGGAGATTTACATATATGTTTGATGGGTGATCCTGGTGTGGCAAAGAGTCAACTTCTTAAACACATTATTAATGTTGCACCCAGGGGAGTTTACACTACTGGCAAAGGAAGTAGTGGCGTTGGTCTAACTGCAGCTGTTCAGAAAGATCCGGTGACAAATGAGATGGTCCTTGAAGGAGGGGCTTTGGTCCTTGCCGATATGGGCATTTGTGCTATTGATGAGTTTGACAAGATGGATGAATCCGATCGTACAGCGATACATGAAGTTATGGAGCAGCAGACTGTCAGTATCGCAAAGGCTGGGATCACTACATCTCTGAATGCAAGGACTGCTGTACTTGCTGCTGCCAATCCAGCATGGGGAAGATATGACCTACGGAGAACCCCAGCGGAAAATATAAATCTTCCCCCAGCCCTTTTATCACGATTTGATCTTCTATGGCTGATCCTTGATCGAGCTGATATGGATAGTGATCTTGAAATGGCCAGGCATGTTGTCTATGTCCACCAGAACAAAGAATCTCCTGCTCTTGGGTTTACTCCTCTAGAACCATCTGTTCTTCGAGCATACATTTCAGCAGCAAGAAGGATATCTCCTTTCTTTTCAAGGGATTTGGAGGAGTATGTTGCAAGTGCTTACTCCAGCATTCGACAAGGAAGAAGCTAA 1767 42.95 MKDLDINAEKLLTKDFLSHFADANGEAKYVNILQEVANRKVRAVYIDLEDLFNYKDLDEEFLKRITENTRRYIGIFADVIDELMPEPTEAFADDDHDILMTQRSDDGPDNVDGSDPFQKMPPEIKRYFEVYIRASSKGRPFTIREVRASHIGQLVRISGIVTRCSDVKPLMRVAVYTCENCGFEIYQEVTARVFMPLFVCPSRRCITNRSKGNLILQLRASKFLKFQEAKIQELAEHVPKGHIPRTMTVHFRGELTRKVAPGDVVELSGIFLPIPYTGFRAMRAGLVADTYLEAMSINHFKKKYEEYELKGGEADLIANLAESGDIYNKLARSLAPEIFGHEDIKKALLLLLVSAPHRKLKDGMKIRGDLHICLMGDPGVAKSQLLKHIINVAPRGVYTTGKGSSGVGLTAAVQKDPVTNEMVLEGGALVLADMGICAIDEFDKMDESDRTAIHEVMEQQTVSIAKAGITTSLNARTAVLAAANPAWGRYDLRRTPAENINLPPALLSRFDLLWLILDRADMDSDLEMARHVVYVHQNKESPALGFTPLEPSVLRAYISAARRISPFFSRDLEEYVASAYSSIRQGRS 588
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 40734099 40739140 - Bda015326.1 Bda10g00656 14544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda10g00656 588 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 336 582 IPR027417 -
Bda10g00656 588 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 36 585 IPR031327 GO:0003677|GO:0005524|GO:0032508
Bda10g00656 588 ProSiteProfiles MCM family domain profile. 326 532 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bda10g00656 588 Gene3D - 9 101 - -
Bda10g00656 588 ProSitePatterns MCM family signature. 435 443 IPR018525 GO:0003677|GO:0005524|GO:0006260
Bda10g00656 588 Gene3D - 170 224 - -
Bda10g00656 588 SUPERFAMILY Nucleic acid-binding proteins 13 294 IPR012340 -
Bda10g00656 588 Gene3D - 312 588 IPR027417 -
Bda10g00656 588 SMART mcm 139 588 IPR031327 GO:0003677|GO:0005524|GO:0032508
Bda10g00656 588 Pfam MCM OB domain 143 273 IPR033762 -
Bda10g00656 588 Pfam MCM P-loop domain 315 536 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bda10g00656 588 Pfam MCM N-terminal domain 14 132 IPR027925 -
Bda10g00656 588 PRINTS Mini-chromosome maintenance (MCM) protein family signature 506 514 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bda10g00656 588 PRINTS Mini-chromosome maintenance (MCM) protein family signature 455 468 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bda10g00656 588 PRINTS Mini-chromosome maintenance (MCM) protein family signature 427 441 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bda10g00656 588 PRINTS Mini-chromosome maintenance (MCM) protein family signature 367 382 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bda10g00656 588 PRINTS Mini-chromosome maintenance (MCM) protein family signature 479 491 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bda10g00656 588 PRINTS Mini-chromosome maintenance (MCM) protein 7 signature 158 169 IPR008050 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Bda10g00656 588 PRINTS Mini-chromosome maintenance (MCM) protein 7 signature 285 295 IPR008050 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Bda10g00656 588 PRINTS Mini-chromosome maintenance (MCM) protein 7 signature 176 187 IPR008050 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Bda10g00656 588 PRINTS Mini-chromosome maintenance (MCM) protein 7 signature 120 132 IPR008050 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Bda10g00656 588 PRINTS Mini-chromosome maintenance (MCM) protein 7 signature 193 205 IPR008050 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Bda10g00656 588 PANTHER DNA REPLICATION LICENSING FACTOR MCM7 36 585 IPR008050 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Bda10g00656 588 Gene3D - 143 271 IPR012340 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda09g00764 Bda-Chr9:13933455 Bda10g00656 Bda-Chr10:40734099 7.38E-109 dispersed
Bda10g00656 Bda-Chr10:40734099 Bda14g00572 Bda-Chr14:4347542 8.39E-96 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda10g00656 K02210 - qsu:112007744 1063.14