Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda10g00668 ATGGAGGAAATCAGCATGTCGTTATTGTCTTATATCAATTCGACTAGCTATCCACTTTCAGGGGCGCCGTTTGATTTCTCTGATGGCTCAGGGAAGAACTCCCTAGGGTTTATGGAGCTTCTGGCTGTTCAAGATCCCTTTGCTTCCTCTTTGTTTGATTTGCCACAACCACCGTCTCCGTTTCTACAGCAGTCGTCTGCTCCTTATTCGGCCTCCGTTGTCAAAGAGTGTCGGGCGGAGACGGCCGTGAATAACCCACTCACTCCAAACTCCTCCTCCAACTCATCCGCTTCTAGCGACGCTGTCGATGATGAATCGGCCGAGCACGGTAGAGATGTTAATCAAATCAAGAAAGAGAAGCATAAAACGACATTGAAGTTGAAAGCAAACAAGACAAACGAGAAGAGACAGAGAAAGCCGAGATTTGCGTTTATGACCAAGAGTGAGATTGATCATTTGGAAGATGGGTATAGATGGAGAAAATACGGTCAAAAAGCTGTCAAGAACAGCTCCTTTCCCAGGAGTTATTATCGTTGCACCACAACAACATGCGATGTGAAGAAACATGTAGAGAGATGTTTCAGCGATCCAACCATAGTAGTGACGACCTATGAAGGTCAACACACCCATCCAAGCCCAGTCGTGGCTCAAACTCCAGCATATCGTTATCAAGATCATCATCAACCCTCTTTCCGATGTTCGTCTTTTCCTGTGAATTTTGACGCTCGCGAGAATGGCGCTACAAATCCTGAGTTTGTTCTTCAGAGACACTTAAAAGCAGCTTCTTTTACAGACAGTGGGCTTCTTCAAGATATCATCCCCAGTAATTGTAAGGTAAAGCAGGAGAAGTAA 852 45.31 MEEISMSLLSYINSTSYPLSGAPFDFSDGSGKNSLGFMELLAVQDPFASSLFDLPQPPSPFLQQSSAPYSASVVKECRAETAVNNPLTPNSSSNSSASSDAVDDESAEHGRDVNQIKKEKHKTTLKLKANKTNEKRQRKPRFAFMTKSEIDHLEDGYRWRKYGQKAVKNSSFPRSYYRCTTTTCDVKKHVERCFSDPTIVVTTYEGQHTHPSPVVAQTPAYRYQDHHQPSFRCSSFPVNFDARENGATNPEFVLQRHLKAASFTDSGLLQDIIPSNCKVKQEK 283
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 40786411 40787723 + Bda015335.1 Bda10g00668 14556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda10g00668 283 SMART WRKY_cls 153 212 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bda10g00668 283 MobiDBLite consensus disorder prediction 83 101 - -
Bda10g00668 283 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 14 217 IPR044810 GO:0003700
Bda10g00668 283 MobiDBLite consensus disorder prediction 102 123 - -
Bda10g00668 283 Pfam WRKY DNA -binding domain 154 211 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bda10g00668 283 Gene3D WRKY domain 138 214 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bda10g00668 283 PANTHER WRKY TRANSCRIPTION FACTOR 14 217 - -
Bda10g00668 283 SUPERFAMILY WRKY DNA-binding domain 145 213 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bda10g00668 283 ProSiteProfiles WRKY domain profile. 148 213 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bda10g00668 283 MobiDBLite consensus disorder prediction 82 123 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda05g00405 Bda10g00668 CCT
Bda05g00405 Bda10g00668 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda10g00668 Bda-Chr10:40786411 Bda13g00224 Bda-Chr13:2849666 4.03E-60 dispersed
Bda10g00668 Bda-Chr10:40786411 Bda05g00405 Bda-Chr5:49364112 9.54E-66 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
16510 PF03106 WRKY 2.70E-25 CL0274 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda10g00668 - - jre:109007199 238.81