Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda10g00721 GAAGTACAGCCAAAAACCATCAAAAGCATGGGCAGTCAGGTGTGCCAGATCTGTGGAGACAGTGTTGGGAAGACCGTGGATGGTGAAGCATTCACAGCTTGCAACATTTGTGCTTTTCCTGTATGCAGGCCATGCTATGAATACGAAAGGAAGGATGGAAATCAGTCTTGCCCTCAGTGCAAAACCAGATACAAGAGGCACAAAGGTAGTCCTGCTATTCTCGGTGATGAAGAAGAGGATGCTGAAGATCATGATGGCGTTAGCGATATCAATTACAATGCTGAAAGCCAAAACCAGAAGCAGAAAATTGCAGAGCGTATGTTGAGTTGGCAGATGACGTATGGACGGGCTGAAGATCTTGGACCTGCAAGTTATGACAAGGAGATTTCTACCAATCACATTCCTTGTCTCACCAATGGGCAAGAGGTTTCTGGAGAATTATCTAATGCATCCCCCGAACGTCTTTTTATGGCATCTCCTGGAGTATCTGGAGGGAAGCGAATTCATGCGCTTCCTTACACAGCTGACATAAACCAATCTTCCAATGTGCGGGTTGTGGATCCTGCAAGAGAATTTAGCTCACCAGGCTTGGGCAATGTAGCTTGGAAAGAGAGAGTTGATGGATGGAAGATGAAGCAAGAAAAGAATGTTGTCCCAATGAGTACTGGTCAAGCTGCATCTGAAAGGGGAGGTGGAGATATTGATGCCAGCACTGACGTGCTTGTGGATGATTCTTTACTGAATGACGAAGCTCGGCAGCCTCTTTCAAGAAAGGTGTCTGTGCCATCATCTCGAATAAACCCTTATAGAATGGTCATTGTTCTGCGGCTGGTTATCCTTTCTATTTTCCTGCATTACCGAATAACTAATCCTGTGCCAAATGCCTATGCTCTGTGGCTTATATCTGTTATATGTGAGATTTGGTTTGCTATTTCTTGGATATTAGATCAGTTCCCTAAGTGGCTTCCTGTTAATCGGGAAACATATCTTGATCGGCTTGCTCTAAGATATGACAGGGAAGGAGAACCATCACAGCTAGCTGCTGTTGATATTTTTGTGAGTACCGTCGACCCATTAAAGGAGCCTCCTCTCGTGACAGCCAATACTGTGCTCTCAATTCTTGCAGTTGACTACCCAATTGACAAGGTCTCCTGCTATCTTTCTGATGATGGATCTGCTATGTTGACATTTGAAGCTTTATCCGAAACATCAGAATTTGCTAGGAAATGGGTTCCCTTTTGCAAAAAATATAGCATTGAACCTAGAGCTCCAGAATGGTACTTTGCTCAAAAAATTGACTACCTGAAGGATAAAGTCCATCCATCATTTGTGAAAGACCGTAGAGCTATGAAGAGGGAGTATGAGGAATTTAAGGTTCGTGTTAATGGTCTGGTGGCAAAGGCACAGAAGGTTCCTGAAGAAGGATGGATTATGCAAGATGGAACACCATGGCCTGGGAATAATGTTAGAGATCATCCTGGGATGATTCAGGTTTTCTTAGGCCAAAGTGGAGGACTAGATGCTGAAGGTAATGAACTGCCACGCCTAGTCTATGTCTCCCGTGAAAAGCGTCCTGGATTCCAGCATCATAAGAAAGCTGGTGCTATGAATGCACTTGTTCGAGTGTCAGCAGTACTTACCAATGGGCCTTTCCTGTTGAATCTTGATTGTGATCACTACATAAACAATAGCAAGGCCTTGAGAGAAGCAATGTGTTTTATGATGGATCCTAACCTTGGGAAATATGTCTGCTATGTTCAGTTTCCACAGAGGTTTGATGGTATTGACAGGAATGACCGATATGCTAACCGTAATACTGTTTTCTTTGATATTAATTTAAGAGGTTTGGACGGAATTCAAGGTCCAGTTTATGTGGGTACTGGTTGCGTCTTCAATAGAACTGCTTTATACGGTTATGAACCTCCTCTAAAGCCAAAGCATAAAAAACCTGGGTTGCTGTCTTCACTCTGCGGAGGGTTTCGAAAGAAAAACTCAAAATCAAGCAAGAAGGGCTCAGACAAAAAGAAATCTGGGAAACATGTTGATCCCACTGTACCAATCTTTAGTCTTGAAGACATTGAAGAAGGGGTAGAAGGTGCAGGATTTGATGATGAGAAGTCGCTACTAATGTCACAAATGAGCTTGGAGAAAAGATTTGGTCAGTCCGCTGTTTTTGTTGCCTCTACCCTCATGGAAAATGGTGGTGTTCCTCAGTCTGCGACTCCAGAAACTCTTCTTAAAGAGGCAATTCATGTTATTAGCTGCGGCTACGAGGACAAATCAGATTGGGGAACTGAGATTGGATGGATATACGGCTCCGTCACTGAAGATATTCTTACAGGATTCAAGATGCATGCCCGTGGATGGCGTTCAATTTATTGCATGCCTAAGCGTCCGGCTTTTAAAGGTTCTGCTCCAATTAATCTTTCAGATCGTTTGAATCAAGTGCTTCGGTGGGCTCTAGGTTCAGTGGAAATTCTGCTAAGTAGACATTGCCCTATCTGGTACGGTTATGGTGGTAGGCTTAAGTGGCTTGAAAGGTTTGCATACGTCAACACTACCATTTATCCAATCACCGCCATCCCTCTTCTTATGTACTGTACATTGCCCGCTGTCTGTCTGCTGACAAACAAATTCATTATTCCACAGATTAGTAACATTGCAAGTATATGGTTCATATCTCTCTTCCTTTCCATCTTTGCTACTGGTATTCTGGAGATGAGATGGAGTGGCGTGGGAATCGATGAGTGGTGGAGGAACGAACAGTTTTGGGTTATTGGTGGAGTTTCAGCCCATCTTTTTGCAGTTTTCCAAGGTTTGCTCAAAGTTCTTGCTGGAATTGACACCAACTTCACTGTTACATCCAAGGCATCTGACGAAGAGGGTGATTTTGCCGAACTCTACATGTTCAAATGGACGACTCTTCTTATCCCGCCCACCACTCTCCTCATTGTAAACTTGGTCGGGGTTGTAGCCGGTATATCTTACGCGATCAACAGCGGATATCAATCTTGGGGTCCGCTCTTCGGGAAGCTTTTCTTTGCCTTCTGGGTGATTATCCATCTCTATCCCTTCCTCAAAGGTTTCATGGGTAGGCAGAATAGGACGCCCACAATTGTTGTCGTCTGGTCGATCCTTCTCGCGTCCATTTTCTCCTTGTTATGGGTCCGAATCGATCCATTTACAACTTCAGTTACTGGTCCCGATGTCGAGCAATGTGGAATCAACTGCTGA 3234 44.06 EVQPKTIKSMGSQVCQICGDSVGKTVDGEAFTACNICAFPVCRPCYEYERKDGNQSCPQCKTRYKRHKGSPAILGDEEEDAEDHDGVSDINYNAESQNQKQKIAERMLSWQMTYGRAEDLGPASYDKEISTNHIPCLTNGQEVSGELSNASPERLFMASPGVSGGKRIHALPYTADINQSSNVRVVDPAREFSSPGLGNVAWKERVDGWKMKQEKNVVPMSTGQAASERGGGDIDASTDVLVDDSLLNDEARQPLSRKVSVPSSRINPYRMVIVLRLVILSIFLHYRITNPVPNAYALWLISVICEIWFAISWILDQFPKWLPVNRETYLDRLALRYDREGEPSQLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPIDKVSCYLSDDGSAMLTFEALSETSEFARKWVPFCKKYSIEPRAPEWYFAQKIDYLKDKVHPSFVKDRRAMKREYEEFKVRVNGLVAKAQKVPEEGWIMQDGTPWPGNNVRDHPGMIQVFLGQSGGLDAEGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFMMDPNLGKYVCYVQFPQRFDGIDRNDRYANRNTVFFDINLRGLDGIQGPVYVGTGCVFNRTALYGYEPPLKPKHKKPGLLSSLCGGFRKKNSKSSKKGSDKKKSGKHVDPTVPIFSLEDIEEGVEGAGFDDEKSLLMSQMSLEKRFGQSAVFVASTLMENGGVPQSATPETLLKEAIHVISCGYEDKSDWGTEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILLSRHCPIWYGYGGRLKWLERFAYVNTTIYPITAIPLLMYCTLPAVCLLTNKFIIPQISNIASIWFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSAHLFAVFQGLLKVLAGIDTNFTVTSKASDEEGDFAELYMFKWTTLLIPPTTLLIVNLVGVVAGISYAINSGYQSWGPLFGKLFFAFWVIIHLYPFLKGFMGRQNRTPTIVVVWSILLASIFSLLWVRIDPFTTSVTGPDVEQCGINC 1077
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 41633154 41639037 + Bda015395.1 Bda10g00721 14609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda10g00721 1077 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1 89 IPR013083 -
Bda10g00721 1077 MobiDBLite consensus disorder prediction 656 681 - -
Bda10g00721 1077 Pfam Cellulose synthase 349 1070 IPR005150 GO:0016020|GO:0016760|GO:0030244
Bda10g00721 1077 CDD mRING-HC-C4C4_CesA_plant 13 63 - -
Bda10g00721 1077 SUPERFAMILY RING/U-box 4 84 - -
Bda10g00721 1077 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 486 640 IPR029044 -
Bda10g00721 1077 SUPERFAMILY Nucleotide-diphospho-sugar transferases 363 890 IPR029044 -
Bda10g00721 1077 Pfam Zinc-binding RING-finger 5 80 IPR027934 -
Bda10g00721 1077 PANTHER CELLULOSE SYNTHASE 5 1077 - -
Bda10g00721 1077 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 5 1077 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g00590 Bda-Chr3:4901375 Bda10g00721 Bda-Chr10:41633154 0 dispersed
Bda10g00721 Bda-Chr10:41633154 Bda11g00870 Bda-Chr11:8572037 0 dispersed
Bda10g00721 Bda-Chr10:41633154 Bda01g00738 Bda-Chr1:34669730 0 transposed
Bda10g00721 Bda-Chr10:41633154 Bda03g00065 Bda-Chr3:718275 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda10g00721 K10999 - pvy:116132241 2039.62