Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda10g00755 ATGTATCTCTCTCATCTCGATCTCTCTCGTAATCGTATAAATGGGTCTATCCCCTCGTCTTTATTTTCGTCTCTGAATCGCCTCCAGTTTCTGAATTTGAGCTATAATATACTTTACGGCCAATTACAGGCGACATCTTCAACTGCTGATAACTTTGGTGATGGTTTGATAGAGACTATAGACTTGTCGACTAATCATTTTTCTGGTATAATCAGTTCTTCGTTCGTCCAGCGAGTGGCAAAATCTGGGTCTTTGGTAAGTTTCAATATCAGTAACAATGGATTTACAGGTCTGGTCCCTACCTCCTTCTGCTTAAACACTAGTTTGAACAGTTCTCTCAGGCAACTGGATTTGTCGTCAAATGATTTTAGTGGTCAAATTACGGCTGGACTGGGGGAATGTTCGAATTTGGTCGTGTTCAGAGCAGGGTTCAACGAACTCTCTGGACCAATTCCATCTGATCTTTACGACTGTGTCGAGCTTGAAGAGATTTCTCTGCCTCTCAACAGTCTCAGTGGAACTATCAGCGATGAAATCTTTCGTCTCAGAAACCTCAAAATCCTCGAACTCTACTCCAACCAGTTGATCGGCAACATTCCAGAGGGAATAGGGAAGCTTTCGAAGCTCGAGGAACTGTATCTTCACATCAATAACCTCACGGGTACGGTCCCTTCCTCGCTGATGAATTGCTCCGGCCTAATCATATTGAATCTGCGGGTCAACGCTCTGCAAGGAGAACTCGCCGGTTTGGATTTCTCTAAACTGTCGCGACTGAGAACGCTCGATCTCGGCAACAACCAGTTCACCGGCAGCATTCCGCCGACCTTATACTCGTGCACATCACTCAAGGCTGTCAGACTGTCCAGCAATCGGCTGACAGGAGAGATCTTACCCGGGATTCAAGCGCTCCAATCGCTCTCGTTTCTTTCGATTTCTAGGAACAATCTATCGAATCTCACCGTGGCTATAAGAAGTCTGGTTGGTTGTAAGAATCTGAGCACGCTGGTTCTCTCCCAGAGTTATTCCGGGGAGGAATTGCCTGACGGTGATGGCATCGTCGATCAAAATAGTTTCCAGAATATTCAGCTTTTGGCTTTGGGAGCCTGCAACTTAACCGGTCGAGTTCCGTCGTGGGTCGTCAACCTTAAGAAACTCGAGGCGTTGGACCTATCTTTCAATCAACTCGTCGGTTCAATTCCTAATTGGCTGGGCGATCTTCCAAGTCTTTTCTACATTGACTTGTCCAATAACAACCTTACCGGAGAATTTCCCGACAAGTTTTGCAGTTTGCCGGCGTTGGTAACGAAGCAAGTTCTAGATCCAGAAACCCAGAGTTTTCTTGCTTTGCCTGTCTTCGTCGCCCCCAACAATGCAAGCATTCACAACCAGCTTTCAAGCATTCCTAACGCTATTTATCTAGGAAATAACTCCATCAGTGGCATCATACCTTCAGAAATCGGCCAGTTGAAGATTATTCAAATATTGGACCTTAGCCACAACAACTTTTCCGGCAGCATACCTGATACGATTTCGAATCTCGTTAATTTGGAACGATTGGATCTGTCTAATAACCATCTTACCGGCCAAATTCCTCCTTCCCTTGGAGGTCTCCATTTTTTGTCTTGGTTCAGTGTGGCAAATAACAGTCTTCAAGGACCAGTACCAGTTGGAGGTCAATTCGATACTTTTCCGAGCTCCAGCTACGACGGAAATCCAGGGCTCTGCGGTCCGCCTATAGTTCAGCGCTCTTGCGTCGAGGAAACGAGATCTTCCAATTCTTCCAATATCCAAAAAAGTCTGAGTAAAAAACTCATCATTCCTCTAGTTTTCGGGTTCTGTTTGGTTTCTGGCCTTATAGTCGGAGTGATAGTGTTTTGGATTCTATCCAAGAAGAGAATCATTCCGGGAAGGGACAGCGAAAAGATCGAATCGGACACTATTTCTTATACTTCTGATATCGATGTCGATAAAGACGCAAGCACGGTCATGTTATTTCCCAACAATGCCGGTGAAACCAAGGATCTTACCATCTACGATATCTTAGCGGCGACCGATAATTTCAGTCAAGAAAACATCATCGGCTGCGGCGGTTTTGGGTTGGTTTACAGAGCAATATTAACAAACGGGACAAAACTCGCCGTTAAGAAACTCTCCGGAGATATGGGTCTGATGGAAAGGGAATTCAAAGCAGAGGTGGAGGCTCTGTCTGCAGCCCGACACGAAAATCTGGTTACTCTACAAGGTTATTGCGTACACGACGGCTGTCGGCTGCTGATTTATACCTACATGGAGAACGGAAGTTTGGATTATTGGTTGCACGAGAAAATCGACCTCCCATCTCAGCTAGACTGGCCGACTCGCCTGAGAATCGCTCAGGGAGCGAGCTCGGGATTGGCTTACATGCACCAGATTTGCGAGCCGCATATCGTTCACCGCGACATAAAATCTAGCAATATCCTCCTCGACAGAGAATTCAAAGCTCACGTCGCCGATTTCGGACTCTCCCGACTGATCGATCCGTACCAGACTCACGTTACGACGGAGCTGGTCGGCACGCTCGGCTACATTCCACCGGAATATGGACAGGGGTGGATAGCCACTCTGAGAGGAGATGTGTTCAGTTTTGGAGTGGTCGTACTCGAGCTGCTTACCGGGAGAAGATCTATGGAAATAAGTAGGCCGATGATATCCAGAGACTTGGTTAGTTGGGCACAACAAATGAAGAAAGAGGGTAAAGAAAATGAAGTTTTTGATCCAGTCCTGAGAGGAAAAGGGTTTGAAGAAGAAATGGTCCGGGTTCTCGACGTGGCGTGCATGTGCGTTAATCGGAATCCGGTTAAACGGCCGACAATCGGAGAAGTTGTCGATTGGTTGAAGAATATCGGGTCCTCGCAGCCAGAGCAAATTAAGTGCTTGTGA 2919 46.49 MYLSHLDLSRNRINGSIPSSLFSSLNRLQFLNLSYNILYGQLQATSSTADNFGDGLIETIDLSTNHFSGIISSSFVQRVAKSGSLVSFNISNNGFTGLVPTSFCLNTSLNSSLRQLDLSSNDFSGQITAGLGECSNLVVFRAGFNELSGPIPSDLYDCVELEEISLPLNSLSGTISDEIFRLRNLKILELYSNQLIGNIPEGIGKLSKLEELYLHINNLTGTVPSSLMNCSGLIILNLRVNALQGELAGLDFSKLSRLRTLDLGNNQFTGSIPPTLYSCTSLKAVRLSSNRLTGEILPGIQALQSLSFLSISRNNLSNLTVAIRSLVGCKNLSTLVLSQSYSGEELPDGDGIVDQNSFQNIQLLALGACNLTGRVPSWVVNLKKLEALDLSFNQLVGSIPNWLGDLPSLFYIDLSNNNLTGEFPDKFCSLPALVTKQVLDPETQSFLALPVFVAPNNASIHNQLSSIPNAIYLGNNSISGIIPSEIGQLKIIQILDLSHNNFSGSIPDTISNLVNLERLDLSNNHLTGQIPPSLGGLHFLSWFSVANNSLQGPVPVGGQFDTFPSSSYDGNPGLCGPPIVQRSCVEETRSSNSSNIQKSLSKKLIIPLVFGFCLVSGLIVGVIVFWILSKKRIIPGRDSEKIESDTISYTSDIDVDKDASTVMLFPNNAGETKDLTIYDILAATDNFSQENIIGCGGFGLVYRAILTNGTKLAVKKLSGDMGLMEREFKAEVEALSAARHENLVTLQGYCVHDGCRLLIYTYMENGSLDYWLHEKIDLPSQLDWPTRLRIAQGASSGLAYMHQICEPHIVHRDIKSSNILLDREFKAHVADFGLSRLIDPYQTHVTTELVGTLGYIPPEYGQGWIATLRGDVFSFGVVVLELLTGRRSMEISRPMISRDLVSWAQQMKKEGKENEVFDPVLRGKGFEEEMVRVLDVACMCVNRNPVKRPTIGEVVDWLKNIGSSQPEQIKCL 972
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 41955985 41958903 - Bda015427.1 Bda10g00755 14643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda10g00755 972 ProSiteProfiles Leucine-rich repeat profile. 515 538 IPR001611 GO:0005515
Bda10g00755 972 SUPERFAMILY Protein kinase-like (PK-like) 668 958 IPR011009 -
Bda10g00755 972 SMART LRR_sd22_2 513 539 - -
Bda10g00755 972 SMART LRR_sd22_2 206 232 - -
Bda10g00755 972 SMART LRR_sd22_2 382 401 - -
Bda10g00755 972 SMART LRR_sd22_2 182 201 - -
Bda10g00755 972 SMART LRR_typ_2 206 230 IPR003591 -
Bda10g00755 972 SMART LRR_typ_2 513 537 IPR003591 -
Bda10g00755 972 SMART LRR_typ_2 303 326 IPR003591 -
Bda10g00755 972 SMART LRR_typ_2 255 279 IPR003591 -
Bda10g00755 972 SMART LRR_typ_2 489 512 IPR003591 -
Bda10g00755 972 SMART LRR_typ_2 382 406 IPR003591 -
Bda10g00755 972 SMART LRR_typ_2 182 205 IPR003591 -
Bda10g00755 972 SMART LRR_typ_2 3 24 IPR003591 -
Bda10g00755 972 Pfam Protein kinase domain 688 955 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda10g00755 972 Gene3D Transferase(Phosphotransferase) domain 1 763 970 - -
Bda10g00755 972 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 3 959 - -
Bda10g00755 972 PRINTS Leucine-rich repeat signature 513 526 - -
Bda10g00755 972 PRINTS Leucine-rich repeat signature 3 16 - -
Bda10g00755 972 SMART serkin_6 687 958 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda10g00755 972 SUPERFAMILY L domain-like 3 139 - -
Bda10g00755 972 Gene3D Ribonuclease Inhibitor 1 249 IPR032675 -
Bda10g00755 972 SUPERFAMILY L domain-like 115 571 - -
Bda10g00755 972 Gene3D Ribonuclease Inhibitor 250 593 IPR032675 -
Bda10g00755 972 ProSitePatterns Protein kinases ATP-binding region signature. 693 716 IPR017441 GO:0005524
Bda10g00755 972 PANTHER OS02G0155400 PROTEIN 3 959 - -
Bda10g00755 972 Pfam Leucine Rich repeat 278 296 IPR001611 GO:0005515
Bda10g00755 972 Pfam Leucine Rich repeat 110 125 IPR001611 GO:0005515
Bda10g00755 972 Pfam Leucine rich repeat 360 419 IPR001611 GO:0005515
Bda10g00755 972 Pfam Leucine rich repeat 471 526 IPR001611 GO:0005515
Bda10g00755 972 Pfam Leucine rich repeat 208 268 IPR001611 GO:0005515
Bda10g00755 972 ProSitePatterns Serine/Threonine protein kinases active-site signature. 809 821 IPR008271 GO:0004672|GO:0006468
Bda10g00755 972 Gene3D Phosphorylase Kinase; domain 1 649 762 - -
Bda10g00755 972 ProSiteProfiles Protein kinase domain profile. 687 958 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda10g00755 Bda-Chr10:41955985 Bda12g00552 Bda-Chr12:9114461 2.76E-29 dispersed
Bda10g00755 Bda-Chr10:41955985 Bda03g01111 Bda-Chr3:11359984 6.84E-06 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69865 PF00069 Pkinase 8.10E-39 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda10g00755 - - csv:101217884 1352.81