Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda10g00763 | ATGGGGAAGATTTCGCAGCAGCATCAGAACAACTCCGTCACTGTTAACAGTAGTAACAAGGACAAGGTGAAGAAGAGGACTCGTAAAAGTGTTCCTCGGGATGCTCCTCTGCAGCGGAGCTCCGTCTATCGCGGAGTTACCAGACATCGATGGACGGGGAGATACGAGGCTCATCTGTGGGATAAGAACTGCTGGAATGAATCGCAGAACAAGAAAGGAAGACAAGGTGCCTATGACGATGAAGAAGCAGCAGCTCATGCTTATGATTTGGCAGCTTTAAAGTACTGGGGACAGGAAACCATTCTTAATTTTCCACTAGAATCGTACGAGGAGGAGCTCAGCCAAATGGAAGGCCAATCCAAAGAAGAATATATTGGATCATTGAGAAGGAAAAGTAGTGGGTTCTCTCGAGGAGTCTCGAAATATAGAGGTGTAGCAAGACATCATCACAACGGTAGATGGGAAGCCCGGATTGGTCGAGTATTTGGCAATAAGTATCTCTACCTTGGAACTTATGCTACCCAAGAAGAAGCTGCAACGGCTTACGATATGGCAGCAATAGAGTATCGCGGTCTTAACGCTGTTACGAACTTTGACCTCAGCCGTTATATCAAATGGCTTCGTCCGAATGCTGACGGTCAAAGCAACAACGCTAACGGCCCTGTTAAATCTAACAAGGATATCCAGCCTGACGGGGGTACCGGCAATGACCTGGTTCCTAACCCTACGTCCTTTCAGCTTGGGTTCACCTTTCTACCTCATGACCAGCAGTGCTCTGATGACGGAGAAACTGACGCCCACTCCCTACCGCCGCGATCCGGCGAGGCCGCCTCTGCATCGTCAGCCTTAGGTCTTCTATTGCAGTCGTCGAAGTTCAAAGAGATGATGGAGAGAACGTCGGCCGCTGACTGTCCACGGATACGGACGGAATCGACCGATCCGCCGCGGAGCAGCTTTCCCGACGATATTCAGACGTATTTTGACTGCCAAGACTCCAGCAACTACACAGACGGAGACGATAGCATTTTCGCTGATCTGAATTCCTTCGCATCGCCGATCTTTCAGTGCGAGCTCGATGGT | 1080 | 49.91 | MGKISQQHQNNSVTVNSSNKDKVKKRTRKSVPRDAPLQRSSVYRGVTRHRWTGRYEAHLWDKNCWNESQNKKGRQGAYDDEEAAAHAYDLAALKYWGQETILNFPLESYEEELSQMEGQSKEEYIGSLRRKSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYATQEEAATAYDMAAIEYRGLNAVTNFDLSRYIKWLRPNADGQSNNANGPVKSNKDIQPDGGTGNDLVPNPTSFQLGFTFLPHDQQCSDDGETDAHSLPPRSGEAASASSALGLLLQSSKFKEMMERTSAADCPRIRTESTDPPRSSFPDDIQTYFDCQDSSNYTDGDDSIFADLNSFASPIFQCELDG | 360 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 42073745 | 42076164 | + | Bda033443 | Bda10g00763 | 14651 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda10g00763 | 360 | SUPERFAMILY | DNA-binding domain | 140 | 201 | IPR016177 | GO:0003677 | |
Bda10g00763 | 360 | MobiDBLite | consensus disorder prediction | 256 | 276 | - | - | |
Bda10g00763 | 360 | Gene3D | AP2/ERF domain | 140 | 201 | IPR036955 | GO:0003700|GO:0006355 | |
Bda10g00763 | 360 | Gene3D | AP2/ERF domain | 42 | 107 | IPR036955 | GO:0003700|GO:0006355 | |
Bda10g00763 | 360 | ProSiteProfiles | AP2/ERF domain profile. | 141 | 199 | IPR001471 | GO:0003700|GO:0006355 | |
Bda10g00763 | 360 | ProSiteProfiles | AP2/ERF domain profile. | 42 | 105 | IPR001471 | GO:0003700|GO:0006355 | |
Bda10g00763 | 360 | SUPERFAMILY | DNA-binding domain | 41 | 106 | IPR016177 | GO:0003677 | |
Bda10g00763 | 360 | MobiDBLite | consensus disorder prediction | 1 | 18 | - | - | |
Bda10g00763 | 360 | PANTHER | AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR | 1 | 346 | - | - | |
Bda10g00763 | 360 | PANTHER | AP2 DOMAIN-CONTAINING TRANSCRIPTION FACTOR | 1 | 346 | - | - | |
Bda10g00763 | 360 | CDD | AP2 | 140 | 201 | IPR001471 | GO:0003700|GO:0006355 | |
Bda10g00763 | 360 | PRINTS | Ethylene responsive element binding protein signature | 181 | 201 | IPR001471 | GO:0003700|GO:0006355 | |
Bda10g00763 | 360 | PRINTS | Ethylene responsive element binding protein signature | 43 | 54 | IPR001471 | GO:0003700|GO:0006355 | |
Bda10g00763 | 360 | Pfam | AP2 domain | 140 | 191 | IPR001471 | GO:0003700|GO:0006355 | |
Bda10g00763 | 360 | Pfam | AP2 domain | 41 | 97 | IPR001471 | GO:0003700|GO:0006355 | |
Bda10g00763 | 360 | MobiDBLite | consensus disorder prediction | 1 | 39 | - | - | |
Bda10g00763 | 360 | SMART | rav1_2 | 42 | 111 | IPR001471 | GO:0003700|GO:0006355 | |
Bda10g00763 | 360 | SMART | rav1_2 | 141 | 205 | IPR001471 | GO:0003700|GO:0006355 | |
Bda10g00763 | 360 | MobiDBLite | consensus disorder prediction | 212 | 240 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda01g02282 | Bda-Chr1:59204511 | Bda10g00763 | Bda-Chr10:42073745 | 5.82E-61 | dispersed | |
Bda10g00763 | Bda-Chr10:42073745 | Bda03g00160 | Bda-Chr3:1319585 | 2.24E-76 | dispersed | |
Bda10g00763 | Bda-Chr10:42073745 | Bda13g01680 | Bda-Chr13:40175782 | 1.91E-07 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
16518 | PF00847 | AP2 | 1.80E-09 | CL0081 | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda10g00763 | K09285 | - | csin:114296584 | 495.352 |