Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda10g00763 ATGGGGAAGATTTCGCAGCAGCATCAGAACAACTCCGTCACTGTTAACAGTAGTAACAAGGACAAGGTGAAGAAGAGGACTCGTAAAAGTGTTCCTCGGGATGCTCCTCTGCAGCGGAGCTCCGTCTATCGCGGAGTTACCAGACATCGATGGACGGGGAGATACGAGGCTCATCTGTGGGATAAGAACTGCTGGAATGAATCGCAGAACAAGAAAGGAAGACAAGGTGCCTATGACGATGAAGAAGCAGCAGCTCATGCTTATGATTTGGCAGCTTTAAAGTACTGGGGACAGGAAACCATTCTTAATTTTCCACTAGAATCGTACGAGGAGGAGCTCAGCCAAATGGAAGGCCAATCCAAAGAAGAATATATTGGATCATTGAGAAGGAAAAGTAGTGGGTTCTCTCGAGGAGTCTCGAAATATAGAGGTGTAGCAAGACATCATCACAACGGTAGATGGGAAGCCCGGATTGGTCGAGTATTTGGCAATAAGTATCTCTACCTTGGAACTTATGCTACCCAAGAAGAAGCTGCAACGGCTTACGATATGGCAGCAATAGAGTATCGCGGTCTTAACGCTGTTACGAACTTTGACCTCAGCCGTTATATCAAATGGCTTCGTCCGAATGCTGACGGTCAAAGCAACAACGCTAACGGCCCTGTTAAATCTAACAAGGATATCCAGCCTGACGGGGGTACCGGCAATGACCTGGTTCCTAACCCTACGTCCTTTCAGCTTGGGTTCACCTTTCTACCTCATGACCAGCAGTGCTCTGATGACGGAGAAACTGACGCCCACTCCCTACCGCCGCGATCCGGCGAGGCCGCCTCTGCATCGTCAGCCTTAGGTCTTCTATTGCAGTCGTCGAAGTTCAAAGAGATGATGGAGAGAACGTCGGCCGCTGACTGTCCACGGATACGGACGGAATCGACCGATCCGCCGCGGAGCAGCTTTCCCGACGATATTCAGACGTATTTTGACTGCCAAGACTCCAGCAACTACACAGACGGAGACGATAGCATTTTCGCTGATCTGAATTCCTTCGCATCGCCGATCTTTCAGTGCGAGCTCGATGGT 1080 49.91 MGKISQQHQNNSVTVNSSNKDKVKKRTRKSVPRDAPLQRSSVYRGVTRHRWTGRYEAHLWDKNCWNESQNKKGRQGAYDDEEAAAHAYDLAALKYWGQETILNFPLESYEEELSQMEGQSKEEYIGSLRRKSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYATQEEAATAYDMAAIEYRGLNAVTNFDLSRYIKWLRPNADGQSNNANGPVKSNKDIQPDGGTGNDLVPNPTSFQLGFTFLPHDQQCSDDGETDAHSLPPRSGEAASASSALGLLLQSSKFKEMMERTSAADCPRIRTESTDPPRSSFPDDIQTYFDCQDSSNYTDGDDSIFADLNSFASPIFQCELDG 360
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 42073745 42076164 + Bda033443 Bda10g00763 14651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda10g00763 360 SUPERFAMILY DNA-binding domain 140 201 IPR016177 GO:0003677
Bda10g00763 360 MobiDBLite consensus disorder prediction 256 276 - -
Bda10g00763 360 Gene3D AP2/ERF domain 140 201 IPR036955 GO:0003700|GO:0006355
Bda10g00763 360 Gene3D AP2/ERF domain 42 107 IPR036955 GO:0003700|GO:0006355
Bda10g00763 360 ProSiteProfiles AP2/ERF domain profile. 141 199 IPR001471 GO:0003700|GO:0006355
Bda10g00763 360 ProSiteProfiles AP2/ERF domain profile. 42 105 IPR001471 GO:0003700|GO:0006355
Bda10g00763 360 SUPERFAMILY DNA-binding domain 41 106 IPR016177 GO:0003677
Bda10g00763 360 MobiDBLite consensus disorder prediction 1 18 - -
Bda10g00763 360 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1 346 - -
Bda10g00763 360 PANTHER AP2 DOMAIN-CONTAINING TRANSCRIPTION FACTOR 1 346 - -
Bda10g00763 360 CDD AP2 140 201 IPR001471 GO:0003700|GO:0006355
Bda10g00763 360 PRINTS Ethylene responsive element binding protein signature 181 201 IPR001471 GO:0003700|GO:0006355
Bda10g00763 360 PRINTS Ethylene responsive element binding protein signature 43 54 IPR001471 GO:0003700|GO:0006355
Bda10g00763 360 Pfam AP2 domain 140 191 IPR001471 GO:0003700|GO:0006355
Bda10g00763 360 Pfam AP2 domain 41 97 IPR001471 GO:0003700|GO:0006355
Bda10g00763 360 MobiDBLite consensus disorder prediction 1 39 - -
Bda10g00763 360 SMART rav1_2 42 111 IPR001471 GO:0003700|GO:0006355
Bda10g00763 360 SMART rav1_2 141 205 IPR001471 GO:0003700|GO:0006355
Bda10g00763 360 MobiDBLite consensus disorder prediction 212 240 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g02282 Bda-Chr1:59204511 Bda10g00763 Bda-Chr10:42073745 5.82E-61 dispersed
Bda10g00763 Bda-Chr10:42073745 Bda03g00160 Bda-Chr3:1319585 2.24E-76 dispersed
Bda10g00763 Bda-Chr10:42073745 Bda13g01680 Bda-Chr13:40175782 1.91E-07 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
16518 PF00847 AP2 1.80E-09 CL0081 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda10g00763 K09285 - csin:114296584 495.352