Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda10g00770 ATGGCTGTCACTGGGTCTACTCCTGGGCAGCAGCAATTCATTGCAAGCACTGGAAACAGGAGTTTTTCTAATGTGCCGTTGATTGAGAACTCAGATGCTGATCAGATTGTTGTTCCTGACAGGAAAAGCTGGAGAAATCTATTTGCTTACATGGGACCCGGATTTCTCGTTTCGATCGCCTATATCGACCCTGGAAATTTCGAAACTGATTTACAGTCGGGGGCACAATACAAATACGAGCTACTTTGGATCATACTAGTGGCTTCATGTGCTGCTCTTCTAATCCAGTCATTGGCTGCCAATCTTGGAGTTGTTACAGGTACTTGGTTCATAGTCCTACTCCATTTTAGTATCCTTCTTTTTTATTTTTTTTATAAATTTTGTTTTGTGATTATAGGAAAGCATTTAGCAGAGCACTGCCGAGCTGAATACCCTCACGTTCCCAACTTAATCCTATGGGTTCTGGCTGAAATTTCAATAGTTGCATGCGACATTCCAGAGGTTATAGGAACAGCTTTTGCTTTGAACATGCTCTTCAAAATTCCCGTTTGGTCCGGGGTTCTTCTCACTGGACTCAGTACATTGATGCTTCTAGCATTACAGCAATATGGGGTTAGGAAGCTCGAGTTCTTGATAGCATTTCTCGTCCTTACAATTGCTGTTTGCTTCTTTATCGAGCTTGGCTATGCCAAGCCAGTCGCTTCGGAAGTTCTTTATGGGCTTTTTGTCCCTCAGCTCAAAGGAAATGGCGCTACTGGTCTTGCCATTTCTCTTCTTGGTGCTATGGTTATGCCGCACAATCTCTTCCTTCACTCCGCATTGGTTCTGTCCCGAAAGATTCCACGATCTGTTCGTGGAATCAAGGAAGCTTGCCGATTTTACTTAATAGAGAGTGCCTTTGCTCTCATGATCGCCTTCCTTATAAACGTGTCGGTTATTTCCGTGAGTGGTGCAGTTTGCAATTCGCGAGATTTAAATGCAGAAGACGGGAAGAACTGCAAAGACTTGGACTTGAACTCGGCTTCCTTTTTACTGAGAAATGTGTTGGGTAGTTGGAGCTCGAAGCTTTTCGCAGTTGCTTTGTTGGCATCTGGCCAAAGTTCTACCATTACAGGCACTTATGCAGGCCAGTATGTAATGCAGGGATTTCTCGATTTACGATTGAAGCCATGGCTCCGGAACTTTCTAACGCGATGTTTGGCAATAGTCCCTAGTTTGGTCGTTGCTGTCATTGGCGGCTCTGCTGGAGCTGGGAGGCTGATTATAATTGCATCGATGATTTTGTCGTTTGAACTACCCTTTGCTCTAGTTCCTCTTCTCAAATTCACTAGCAGCAAGGCCAAGATGGGGATGTATGCGAATTCGATCGGGATTTCAGCTCTCACCTGGATAGTCGGTTTCCTGATCATGGCCATCAACATATACTATCTAGTTTCAGGCTTTGTTGGTCTTCTTTTTCATAGAAATTTAGGTCTTTTGGCTGTTGTCCTCCTCGGGATCACCGGATTTTCTGCTATCAGTCTGTATCTGGCCGGAATTGCTTATTTGGTCTTTCGAAAAAACAAAGGCAAAGAAGCTACTGATCTTCTATCCTTGACAATGCAAGAAAGTCAGGAAGCAGCCGAGGAAGCGGGCAATGGTGCAATGCATTGTCTCCCCCGAGAAGACATCGTCTCCATGCAATTGCCTCAGAGAGGTAGCACGGCCGATGTGGAC 1716 44.81 MAVTGSTPGQQQFIASTGNRSFSNVPLIENSDADQIVVPDRKSWRNLFAYMGPGFLVSIAYIDPGNFETDLQSGAQYKYELLWIILVASCAALLIQSLAANLGVVTGTWFIVLLHFSILLFYFFYKFCFVIIGKHLAEHCRAEYPHVPNLILWVLAEISIVACDIPEVIGTAFALNMLFKIPVWSGVLLTGLSTLMLLALQQYGVRKLEFLIAFLVLTIAVCFFIELGYAKPVASEVLYGLFVPQLKGNGATGLAISLLGAMVMPHNLFLHSALVLSRKIPRSVRGIKEACRFYLIESAFALMIAFLINVSVISVSGAVCNSRDLNAEDGKNCKDLDLNSASFLLRNVLGSWSSKLFAVALLASGQSSTITGTYAGQYVMQGFLDLRLKPWLRNFLTRCLAIVPSLVVAVIGGSAGAGRLIIIASMILSFELPFALVPLLKFTSSKAKMGMYANSIGISALTWIVGFLIMAINIYYLVSGFVGLLFHRNLGLLAVVLLGITGFSAISLYLAGIAYLVFRKNKGKEATDLLSLTMQESQEAAEEAGNGAMHCLPREDIVSMQLPQRGSTADVD 572
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 42135834 42139590 + Bda033445 Bda10g00770 14658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda10g00770 572 Pfam Natural resistance-associated macrophage protein 130 455 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bda10g00770 572 Pfam Natural resistance-associated macrophage protein 67 108 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bda10g00770 572 PRINTS Natural resistance-associated macrophage protein signature 425 444 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bda10g00770 572 PRINTS Natural resistance-associated macrophage protein signature 205 226 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bda10g00770 572 PRINTS Natural resistance-associated macrophage protein signature 152 178 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bda10g00770 572 PRINTS Natural resistance-associated macrophage protein signature 180 199 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bda10g00770 572 PRINTS Natural resistance-associated macrophage protein signature 365 384 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bda10g00770 572 PRINTS Natural resistance-associated macrophage protein signature 393 410 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bda10g00770 572 PRINTS Natural resistance-associated macrophage protein signature 255 278 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bda10g00770 572 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 126 572 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bda10g00770 572 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 10 109 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bda10g00770 572 PANTHER METAL TRANSPORTER NRAMP1 10 109 - -
Bda10g00770 572 PANTHER METAL TRANSPORTER NRAMP1 126 572 - -
Bda10g00770 572 Hamap Divalent metal cation transporter MntH [mntH]. 31 481 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bda10g00770 572 TIGRFAM nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 130 449 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda05g01227 Bda-Chr5:60172719 Bda10g00770 Bda-Chr10:42135834 3.95E-28 dispersed
Bda10g00770 Bda-Chr10:42135834 Bda14g01264 Bda-Chr14:13309200 9.39E-103 dispersed
Bda10g00770 Bda-Chr10:42135834 Bda04g00794 Bda-Chr4:57833924 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda10g00770 K21398 - jre:109010061 858.981