Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda10g00782 ATGGCTGCCGATGTTATTTTCACCGTCAAGGACGATAATCCGATCGGGGCAAGTCTGATCGGAAGGGCATACATACCCGTTGAAGAGATTTTAGATGGGCAAGAAGTGGATAAATGGGTTGAAATCTTAGATGCTGACAAAAATCCCATCAGGGGAAACTCTAAGATTCATGTTAAGCTTCAATATTTCGAGGTCACTAAGGATCGTTGTTGGAGTCAAGGAATTCGGAGCGCGAAATTTCCCGGAGTTCCTTATACGTTCTACTCGCAGAGACAAGGGTGTAAGGTCTCTTTGTACCAAGATGCACATATCCCGAATGGTTTCATCCCAAAAATCCCGCTCGCCGGAGGGAAGTTCTTCGAGCCTCACCGGTGTTGGGAAGATGTTTTCGATGCTATAACCAATGCAAAACACCTGATTTACATAACGGGTTGGTCTGTTTACACTGAAATTTCGCTTATAAGGGACTCGAGGAGGCCTAAAGCCGGTGGAGATATCCTACTCGGTGAGCTGCTTAAGAAAAAAGCAAGTGAAGGTGTTAGAGTTCTTATGCTTGTTTGGGATGATAGAACATCTGTTGGTGTGTTGAAAAAAGATGGTCTGATGGCCACTCATGACCAAGAAACAGAACAATTCTTCAAAAATAGCGATGTGCATTGCGTCCTCTGCCCTCGAAATCCCGACGATGGGGGAAGCATAGTTCAAGATTTACAAATCTCAACTATGTTCACTCATCATCAGAAGATCGTTGTGGTCGATAGCGCGATGCCAATCAAAGGATCGAAAAAACGGCGAATCGTGAGTTTTGTGGGCGGTATTGATCTTTGTGATGGAAGATATGATACTCCATTCCATTCGCTTTTCAGGACGTTGGATACTGCCCATCACAATGATTTTCATCAACCGAACTTTGCTGGTGCTACAATTGCGAAAGGCGGACCGAGAGAGCCTTGGCACGACATTCATTCACGACTCGAAGGACCAATTGCATGGGATGTTTTGTTTAATTTTGAGCAAAGATGGAGAAAGCAAGGAGGAAAAGATATCCTTCTTCAACTGAGGGAGCTCGAAGAAGTAATCATCCCGCCTTCTCCGGTTATGTTCCCGGACGATCGCGAAACATGGAATGTTCAGTTATTTCGGTCGATCGATGGGGGGGCTGCTTTCGGCTTTCCGGAGGCGCCTGAAGATGCTGCAAGAGCAGGCCTTGTCAGTGGGAAAGACAACATCATCGATAGAAGCATTCAGGATGCTTACATCAACGCTATTCGACGGGCAAAAGATTTTATCTACATCGAAAATCAGTATTTCCTCGGAAGCTGTTTCGATTGGAGCCCTGATGGTATTAAGCCCGAAGATATCGGAGCTCTGCATTTGATTCCAAAGGAGCTCTCTCTGAAGATAGTTAGTAAGATTGAAGCAGGAGAGAGATTTACTGTCTATGTTGTTGTTCCTATGTGGCCGGAGGGAATGCCGGAGAGTGGATCAGTTCAGGCCATTTTAGATTGGCAGAAGAGGACGATGGAGATGATGTATAAAGATATCATTCAGGCTCTAAACGCCAAGGGCATCGAGGACGACCCTCGAAACTATTTGACGTTTTTCTGCCTCGGAAACCGAGAACTCAAGAAGTCCGGCGAGTACGAGCCGTCGGAAAAACCAGAGGAAGATACAGATTATATGAGAGCCCAGCAGGCTAGGCGCTTCATGATTTATGTTCATGCCAAGATGATGATTGGTAAGTGGCATAAACCTCTCTCTGTGAATCCTCTGATCTGTTTATCAAGTCTAATGGCTTTGCCCCTTTTTGCAGTGGACGACGAATACATAATCATCGGCTCGGCCAACATCAACCAGAGATCGATGGACGGAGCAAGAGACTCTGAGATAGCCATGGGAGCCTACCAGCCGTACCATCTGTCGACCCACGTCCCAGCCCGTGGTCAAGTCCATGGCTTTCGCATGGCTCTATGGTACGAACACCTCGGCATGCTTGACGATTGCTTTCTTCAGCCAGAGAGCGAGGAATGTGTTCGGAAGGTGAACCTGATTGCTGACAAATACTGGGACCTCTACTCAAACGAAAACCTCGAGCATGACTTGCCCGGTCACTTGCTTCGCTATCCGGTTGGAATTGCGAGCGAAGGTGCAGTCACGGAGCTGCCGGGGTTCGAGCATTTTCCGGACACAAAAGCTCGTGTGCTCGGAACCAAATCTGACTACCTCCCTCCCATTCTGACCACTTAG 2247 47.13 MAADVIFTVKDDNPIGASLIGRAYIPVEEILDGQEVDKWVEILDADKNPIRGNSKIHVKLQYFEVTKDRCWSQGIRSAKFPGVPYTFYSQRQGCKVSLYQDAHIPNGFIPKIPLAGGKFFEPHRCWEDVFDAITNAKHLIYITGWSVYTEISLIRDSRRPKAGGDILLGELLKKKASEGVRVLMLVWDDRTSVGVLKKDGLMATHDQETEQFFKNSDVHCVLCPRNPDDGGSIVQDLQISTMFTHHQKIVVVDSAMPIKGSKKRRIVSFVGGIDLCDGRYDTPFHSLFRTLDTAHHNDFHQPNFAGATIAKGGPREPWHDIHSRLEGPIAWDVLFNFEQRWRKQGGKDILLQLRELEEVIIPPSPVMFPDDRETWNVQLFRSIDGGAAFGFPEAPEDAARAGLVSGKDNIIDRSIQDAYINAIRRAKDFIYIENQYFLGSCFDWSPDGIKPEDIGALHLIPKELSLKIVSKIEAGERFTVYVVVPMWPEGMPESGSVQAILDWQKRTMEMMYKDIIQALNAKGIEDDPRNYLTFFCLGNRELKKSGEYEPSEKPEEDTDYMRAQQARRFMIYVHAKMMIGKWHKPLSVNPLICLSSLMALPLFAVDDEYIIIGSANINQRSMDGARDSEIAMGAYQPYHLSTHVPARGQVHGFRMALWYEHLGMLDDCFLQPESEECVRKVNLIADKYWDLYSNENLEHDLPGHLLRYPVGIASEGAVTELPGFEHFPDTKARVLGTKSDYLPPILTT 748
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 42226594 42228840 - Bda015451.1 Bda10g00782 14670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda10g00782 748 Gene3D C2 domain 1 73 IPR035892 -
Bda10g00782 748 Gene3D Endonuclease Chain A 391 579 - -
Bda10g00782 748 SUPERFAMILY Phospholipase D/nuclease 603 678 - -
Bda10g00782 748 CDD PLDc_pPLDalpha_2 407 641 - -
Bda10g00782 748 PIRSF PLD_plant 1 581 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Bda10g00782 748 PIRSF PLD_plant 600 748 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Bda10g00782 748 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 241 279 IPR001736 GO:0003824
Bda10g00782 748 SMART pld_4 594 621 IPR001736 GO:0003824
Bda10g00782 748 SMART pld_4 241 279 IPR001736 GO:0003824
Bda10g00782 748 Gene3D Endonuclease Chain A 118 358 - -
Bda10g00782 748 PANTHER PHOSPHOLIPASE D 603 748 IPR015679 -
Bda10g00782 748 PANTHER PHOSPHOLIPASE D ALPHA 1 603 748 - -
Bda10g00782 748 Pfam Phospholipase D Active site motif 241 279 IPR001736 GO:0003824
Bda10g00782 748 Pfam Phospholipase D C terminal 666 738 IPR024632 -
Bda10g00782 748 SUPERFAMILY Phospholipase D/nuclease 370 579 - -
Bda10g00782 748 PANTHER PHOSPHOLIPASE D 1 579 IPR015679 -
Bda10g00782 748 PANTHER PHOSPHOLIPASE D ALPHA 1 1 579 - -
Bda10g00782 748 SUPERFAMILY Phospholipase D/nuclease 67 361 - -
Bda10g00782 748 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 602 621 IPR001736 GO:0003824
Bda10g00782 748 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 5 64 IPR035892 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda06g00065 Bda-Chr6:656717 Bda10g00782 Bda-Chr10:42226594 1.06E-172 dispersed
Bda08g00221 Bda-Chr8:1963338 Bda10g00782 Bda-Chr10:42226594 0 dispersed
Bda10g00782 Bda-Chr10:42226594 Bda10g00858 Bda-Chr10:43057432 0 dispersed
Bda09g01040 Bda-Chr9:40567454 Bda10g00782 Bda-Chr10:42226594 0 transposed
Bda10g00782 Bda-Chr10:42226594 Bda04g00828 Bda-Chr4:58155369 0 wgd
Bda10g00782 Bda-Chr10:42226594 Bda05g00535 Bda-Chr5:53046427 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda10g00782 K01115 - jre:109013902 1328.54