Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda10g00812 ATGGGTATCAGAACAAGAAATCTCTTTCTTCTCATCATAGGGTGTTTCATGTTATGCCATAACCGTTGTTCTTCCACGGGAACCTTTTTGAGGCAAGGCGAATCTCTGCAATATCCTGACCAACTTCTTTCGAAATCTCGAAAATTTCTGCTCTGTTTTTTCGACCCAATTGATGAATACCCTCAAAACCAAAACGTTTTCCTTGGATTATTTTACCATACAACGAAATTCTCATCTTCCTACCCACTGTTGGTGGCAGACAGAGAGAAATTCTCATCTTCCTACCCACTGTGGGTGGCAGACATAAACGCCAGACATGTCGACGGTTCTGCAAATCTTACGCTAGGTAATGATGGAAGCTTGAAGCTTTTATATGAAGGAGGTCGTTCTTTTGTGTTATACTCATCTCAAGCGCCGAGTAATTCCACTGTCGTTCTTCAGGATGATGGAAACTTGGTACTGCGTGAATTCAATTCAGACGGGTCTTCAAGGCAAGACTTGTGGCAAAGCTTTGATCACCCCACAGACACGCTTTTACCAGGAATGAAACTGGGTTTTAACAACAAAACTGGGAAAAACTTGACGCTTGTATCGCAGAGGCTTCAAGGATATGATTATAGATTAGGATCTTACACTTTAGGCGTAGACCCAGCAAAGACAAACCAATTGGTTATTTGGTGGGTGGGAGACTTATTCTGGACTAGTGGACCTTGGAAAAATGGGAATTTCACCTCGGCAACTCCCTTGTCTAGGAATGAAAACTTGAAATTTGACTACGTTTCAAATGAGAATGGAACGTATTTCACCTTTTCTTCCTTCGAAGACATTTTTAATCCTCGGTTGACACTGGACACTGATGGTAGCCTCACACTAATCTCAATCTCGGGTGATTCCAAGACACTGTCCGATTATTATAGATACAGATTCATCATGAGTGATTATTATAGATACAGATTCATCAGGAGTGATTCCAGAGACGCTCTTGTTGATTGCAATAGTTATTATTACAATGGTGAAGATGAGGGATGCGTGGAGAAGCTTCAAGAGTGCCAAGAAAGAGAATTTTATGGCTTTAACCCTCTCTTGGGGATCATGTCCAGCAATGGCACGAAGATGAGTAAGAACTTGACTGGGGATGACTGCGAGCAAAAATGCTACAACAATTGTTCTTGTGTTGCCTTCGCTTCTGCCAGCGACACAGGATGTGTGACTTGGAGCCGAGGGACTACTTTCCGGGAGGCCTCTGTTTTAGATGGAGGCTACCCCATTCATACCTTTACATTCCAAGGTGACTTCCGAGAGAAAGGGAAAAAATTGCCTTGGTGGACATGGTTAGCCATCGCACTAGGAGGGGCTGCTTGTTTTATCATGATATGCTGGTGCTGCTACGTGGTGGCTAAAAGATTCTGCTACGTGGCGGCAAAAAGATGCAGAAGAGAAGTGGAGATTAGATGGAATCAGAGAATGTTACTTCAAGAGATTGGGGGTGATCGTCTACCCTCCTCCAACGAACGAAAGAAAGAAAACAAGACGCAGCGAGAACTGCATATATTCAGTTTCAAAACCATTGTTTCTGCCACCAACAACTTCTCCCATGAAAACCAGTTGGGAAAAGGAGGGTATGGCCCGGTTTATAAGGGAAGGTTACAAGATGGTCAGGAAATTGCCATAAAAAGACTTTCAACCAGTTCAGGACAAGGACTTGTGGAGTTCAAGAAGGAAGCAATACTCATTGCTAAGCTCCAACATACTAATCTGGTTAGGCTTTTAGGGTTTTGCGTTCAAGGAGAAGAGAAAGCCTTAGTATACGAGTACATGCCCAATAAAAGCTTAGATTTCTTCCTCTTCGATTCTACTAGAAAGAAGATACTGGACTGGAAGAAGCGCTTCATCATCATCGAAGGCATTGCACAAGGACTAGTTTACCTCCACAAGTATTCGAGATTGAAAGTTGTTCACAGAGATTTGAAAGCAGGCAACATTCTCCTCGATTTGGAAATGAACCCCAAAATATCAGATTTTGGGATGGCCAGATTGCTGGGTCCCGAAGACTCAGAAGAGAACACAAACAGAATTGTCGGCACATTTGGGTATATGCCTCCAGAATACGCTCTGCAGGGAACCGTGTCCATAAAAACTGACGTGTTTAGTTTTGGAATTCTGTTGCTGGAGATTGTAAGCGGGAGGAAGAATAACAGTCGCTACCATCCAGATCACCCCCTAAATCTTACAGGATATGCTTGGACTTTGTGGAAGGAGGGCAAAGGGGTGGAGCTGATCGACCCTTCAATGGATGAATCAGTTCCTCGTGATGAAGTTATGAAATGCATACAAGTCGGTCTGCTCTGCGTTCAAGATCAAGCGAGCAGCAGACCCACCATGATTGACGTTGTTTTTATGCTCTCAACCGAAAGCGCCCAATTACCAATACCCAGAAAGCCTGCGTTCTTCATCAGTAGCACTGCAGAAACACCGGAGGAAGGACATACACAAGTTGAAATCTTTTCAATAAATGAATTGACCACGTCAATTATGGAGGTAAGGTGA 2547 43.42 MGIRTRNLFLLIIGCFMLCHNRCSSTGTFLRQGESLQYPDQLLSKSRKFLLCFFDPIDEYPQNQNVFLGLFYHTTKFSSSYPLLVADREKFSSSYPLWVADINARHVDGSANLTLGNDGSLKLLYEGGRSFVLYSSQAPSNSTVVLQDDGNLVLREFNSDGSSRQDLWQSFDHPTDTLLPGMKLGFNNKTGKNLTLVSQRLQGYDYRLGSYTLGVDPAKTNQLVIWWVGDLFWTSGPWKNGNFTSATPLSRNENLKFDYVSNENGTYFTFSSFEDIFNPRLTLDTDGSLTLISISGDSKTLSDYYRYRFIMSDYYRYRFIRSDSRDALVDCNSYYYNGEDEGCVEKLQECQEREFYGFNPLLGIMSSNGTKMSKNLTGDDCEQKCYNNCSCVAFASASDTGCVTWSRGTTFREASVLDGGYPIHTFTFQGDFREKGKKLPWWTWLAIALGGAACFIMICWCCYVVAKRFCYVAAKRCRREVEIRWNQRMLLQEIGGDRLPSSNERKKENKTQRELHIFSFKTIVSATNNFSHENQLGKGGYGPVYKGRLQDGQEIAIKRLSTSSGQGLVEFKKEAILIAKLQHTNLVRLLGFCVQGEEKALVYEYMPNKSLDFFLFDSTRKKILDWKKRFIIIEGIAQGLVYLHKYSRLKVVHRDLKAGNILLDLEMNPKISDFGMARLLGPEDSEENTNRIVGTFGYMPPEYALQGTVSIKTDVFSFGILLLEIVSGRKNNSRYHPDHPLNLTGYAWTLWKEGKGVELIDPSMDESVPRDEVMKCIQVGLLCVQDQASSRPTMIDVVFMLSTESAQLPIPRKPAFFISSTAETPEEGHTQVEIFSINELTTSIMEVR 848
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 42479353 42482433 + Bda015481.1 Bda10g00812 14700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda10g00812 848 Gene3D Phosphorylase Kinase; domain 1 496 605 - -
Bda10g00812 848 Pfam D-mannose binding lectin 97 200 IPR001480 -
Bda10g00812 848 SUPERFAMILY Protein kinase-like (PK-like) 512 824 IPR011009 -
Bda10g00812 848 SMART blect_4 33 174 IPR001480 -
Bda10g00812 848 SMART serkin_6 530 799 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda10g00812 848 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE 327 841 - -
Bda10g00812 848 Pfam Protein tyrosine and serine/threonine kinase 533 798 IPR001245 GO:0004672|GO:0006468
Bda10g00812 848 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 94 296 - -
Bda10g00812 848 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 327 841 - -
Bda10g00812 848 CDD STKc_IRAK 536 801 - -
Bda10g00812 848 ProSiteProfiles Protein kinase domain profile. 530 816 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda10g00812 848 ProSitePatterns Serine/Threonine protein kinases active-site signature. 651 663 IPR008271 GO:0004672|GO:0006468
Bda10g00812 848 SUPERFAMILY alpha-D-mannose-specific plant lectins 95 197 IPR036426 -
Bda10g00812 848 PIRSF SRK 2 848 IPR024171 GO:0004674
Bda10g00812 848 ProSiteProfiles PAN/Apple domain profile. 350 428 IPR003609 -
Bda10g00812 848 Gene3D Transferase(Phosphotransferase) domain 1 606 809 - -
Bda10g00812 848 Pfam PAN-like domain 370 407 IPR003609 -
Bda10g00812 848 ProSiteProfiles Bulb-type lectin domain profile. 27 167 IPR001480 -
Bda10g00812 848 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE 94 296 - -
Bda10g00812 848 Gene3D - 23 172 IPR036426 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda02g00574 Bda-Chr2:46575132 Bda10g00812 Bda-Chr10:42479353 7.73E-87 dispersed
Bda08g00361 Bda-Chr8:3709811 Bda10g00812 Bda-Chr10:42479353 2.29E-88 dispersed
Bda10g00812 Bda-Chr10:42479353 Bda10g00819 Bda-Chr10:42569985 0 dispersed
Bda10g00812 Bda-Chr10:42479353 Bda10g00813 Bda-Chr10:42493635 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69870 PF07714 PK_Tyr_Ser-Thr 2.60E-43 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda10g00812 - - tcc:18595921 731.865