Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda10g00819 ATGGATATCAGAACAAGAAATCTTTGTCTTCTCATCGTAGGGTGTTTCATGTTATGTCATAGCCGTTGTTCTTCCATGCAAACCATTTTGAGGCAAGGCGAAACTCTGAAATATCCTGACAAACTACTTTCAGAATCTCGAAACTTTTTGCTACGTTTTTTCGACTCATATGGTCAAACCCAGAAAGTTTTGCTTGGATTATTTTACAATCCAAAGAAGCCCTCATCTTACGAGTGCCAGTGGATGGCTGACAGAAACGCCAATGATCTCGACGGTTCTGCAAATCTTACGCTAGGAATTGATGGAAGCTTAAAGATTTTATACGAAAGAGGCCGTTCTTTTGTGTTATACTCATCTCAAACGCGGAGTAATTCCAGCGTCGTTCTTCAGGATGATGGAAACTTGGTACTGCGTGAATTCAATTCAGACGGGTCTTTAAGGCAAGACTTGTGGCAAAGCTTTGATCATCCCACAGACAAGCTTTTACCAGGAATGAAACTGGGTTTTAACAACAAAACTGGGAAAAACTTGACTCTTGTGTCGCAGAGGCTTCAAGGATATGATTATAGATTAGGATCTTACACTTTAGGCGTAGGCCCAACAAAGATGAATCAATTGGTTATTTGGTGGCTGGGAGACATTTACTGGACTAGTGGACCGTGGGAAAACGGGAATTTCACCTTGGCGACTAATTTGTCAAGGAATGAAAACTTGAATTTCGGCTTCGTATCAAACGAGAATGAAACATTTTTCACCTTTTCTACCTTCGGAGACCTTTTTAATCCTCGGTTAACACTGGACGATAGTGGTGGACTCGCACTTCGCACAAATGATCCCACGGACCCAACAGACGTTCTTGTCAATTGCAGTTCTAATTATTACCGAGATGAGGGATGCATGATTCCAAAGTGCAACGATAGAAAAATTTTTAACTATAAGACCCGAAGGGGGATCATGTCCGGAAGTGGCACAAAGATGAGTAAGAACTTGACTCTGGATGACTGCGGGCGAAGATGCTACAACAATTGTTCTTGTGCTGCCTTCGCTTTTGTCAACAACACAGAATGTGTGATTTGGAGACGAGAGAGTACTTTCCGGGAGACCTCTGCTTTGGATGGAGGCTACCTCGTTAATATTCTTACCTCCCGTGATGGACAATTGCTGTGGTGGATATGGTTAGTCAGTATATTCGGAGGAGCTGCTTTTTTCATCACGATAAGCTGGTGCTCCAAAAGATGCAAAACAAGAGTGGAGACAAGGAGACAGAAAATGTTACTACAAGAGATCGGGGTTGATGCTCTACTCCCCTCAACCAAACGGAAGAAAGAGCAAAAGAAGCATCGAGAACTCCACATATTTAGTTTCAAAAACATCGTTTCGGCCACAAACAATTTCTCCGATGAAAACCAATTGGGAAAAGGAGGGTACGGGCCGGTTTATAAGGGAAGGTTACCTGATGGGCAAGAAATTGCCGTAAAAAGACTTTCAAGCAGTTCAGGACAAGGACTTGTGGAGTTCAAGAATGAAGCCATACTCGTCTCAGAGCTCCAACATACCAATCTGGTAAGGCTTTTAGGGTTTTGCGTTCAAGGAGAAGAGAAAGCCTTAGTATACGAGTACATGCCCAATAAAAGCTTAGATTTCTTCCTCTTCGATTCTACTAGAAAGAAGATACTAGACTGGAAGAAGCGCTTCATCATCATTGAAGGCATTGCACAAGGACTGGTTTATCTGCACAAGTATTCGAGATTGAAAGTTATTCACAGAGATTTAAAAGCAAGCAACATTCTACTTGATTTAGAAATGAACCCCAAAATATCAGATTTTGGGATGGCCAAACTGCTGGGTCCCGTAAACTCAGAACAAAGCACGAAAAGAATAGTCGGCACAGTTGGGTATATGCCTCCGGAATACGCTCTGGAGGGTACTGTGTCCATGAAAATTGATGTGTTTAGTTTTGGCGTTCTGTTGCTCGAGATTGTCAGCGGGAGGAAGAACCACAATCGCTACTCTCCGGATCCCCCCCTAAATCTTACAGGATACGCTTGGACTTTGTGGAAGGAGGGCAGAGGAGTGGAGTTGATTGACCCTTCATTGGACGAATCAATACCTCAGGATGAAGTTATGAAATGCATACAAGTTGGTCTGCTCTGCGTTCAAAATCAAGCGAGCAGCAGACCCACCATGATTGACGTTGTTTTTATGCTCTCAAATGAAAGCGCCCAACTTCCATTACCAAGAAAGCCTGCGTTTTTCATGGGTAGCATTCCAGAAACACCAGAAGAAGACCAGACACGAGTTGAAATCTTTTCAATAAATGAATTGACCATGTCAATTATGGAGGTAAGGTGA 2352 42.77 MDIRTRNLCLLIVGCFMLCHSRCSSMQTILRQGETLKYPDKLLSESRNFLLRFFDSYGQTQKVLLGLFYNPKKPSSYECQWMADRNANDLDGSANLTLGIDGSLKILYERGRSFVLYSSQTRSNSSVVLQDDGNLVLREFNSDGSLRQDLWQSFDHPTDKLLPGMKLGFNNKTGKNLTLVSQRLQGYDYRLGSYTLGVGPTKMNQLVIWWLGDIYWTSGPWENGNFTLATNLSRNENLNFGFVSNENETFFTFSTFGDLFNPRLTLDDSGGLALRTNDPTDPTDVLVNCSSNYYRDEGCMIPKCNDRKIFNYKTRRGIMSGSGTKMSKNLTLDDCGRRCYNNCSCAAFAFVNNTECVIWRRESTFRETSALDGGYLVNILTSRDGQLLWWIWLVSIFGGAAFFITISWCSKRCKTRVETRRQKMLLQEIGVDALLPSTKRKKEQKKHRELHIFSFKNIVSATNNFSDENQLGKGGYGPVYKGRLPDGQEIAVKRLSSSSGQGLVEFKNEAILVSELQHTNLVRLLGFCVQGEEKALVYEYMPNKSLDFFLFDSTRKKILDWKKRFIIIEGIAQGLVYLHKYSRLKVIHRDLKASNILLDLEMNPKISDFGMAKLLGPVNSEQSTKRIVGTVGYMPPEYALEGTVSMKIDVFSFGVLLLEIVSGRKNHNRYSPDPPLNLTGYAWTLWKEGRGVELIDPSLDESIPQDEVMKCIQVGLLCVQNQASSRPTMIDVVFMLSNESAQLPLPRKPAFFMGSIPETPEEDQTRVEIFSINELTMSIMEVR 783
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 42569985 42574395 + Bda015489.1 Bda10g00819 14707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda10g00819 783 Pfam Protein tyrosine and serine/threonine kinase 468 733 IPR001245 GO:0004672|GO:0006468
Bda10g00819 783 Pfam D-mannose binding lectin 81 183 IPR001480 -
Bda10g00819 783 SMART serkin_6 465 734 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda10g00819 783 SUPERFAMILY alpha-D-mannose-specific plant lectins 79 180 IPR036426 -
Bda10g00819 783 Gene3D - 21 154 IPR036426 -
Bda10g00819 783 Pfam PAN-like domain 325 362 IPR003609 -
Bda10g00819 783 SMART blect_4 27 157 IPR001480 -
Bda10g00819 783 Gene3D Transferase(Phosphotransferase) domain 1 541 744 - -
Bda10g00819 783 ProSiteProfiles PAN/Apple domain profile. 304 380 IPR003609 -
Bda10g00819 783 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE 77 774 - -
Bda10g00819 783 Gene3D Phosphorylase Kinase; domain 1 430 540 - -
Bda10g00819 783 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 77 774 - -
Bda10g00819 783 ProSiteProfiles Protein kinase domain profile. 465 751 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda10g00819 783 CDD STKc_IRAK 471 736 - -
Bda10g00819 783 SUPERFAMILY Protein kinase-like (PK-like) 448 761 IPR011009 -
Bda10g00819 783 PIRSF SRK 288 783 IPR024171 GO:0004674
Bda10g00819 783 PIRSF SRK 1 304 IPR024171 GO:0004674
Bda10g00819 783 SMART ntp_6 306 381 IPR003609 -
Bda10g00819 783 ProSitePatterns Serine/Threonine protein kinases active-site signature. 586 598 IPR008271 GO:0004672|GO:0006468
Bda10g00819 783 ProSiteProfiles Bulb-type lectin domain profile. 27 150 IPR001480 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda10g00812 Bda-Chr10:42479353 Bda10g00819 Bda-Chr10:42569985 0 dispersed
Bda10g00819 Bda-Chr10:42569985 Bda15g00939 Bda-Chr15:17293773 5.57E-94 dispersed
Bda10g00813 Bda-Chr10:42493635 Bda10g00819 Bda-Chr10:42569985 0 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69872 PF07714 PK_Tyr_Ser-Thr 4.40E-42 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda10g00819 - - tcc:18595921 694.115