Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda10g00828 ATGGCATTTTCTCTCTTGCCCTTCTGCTGCATTTGCCTGGGTGTCTTCTTCGTGCTTTGTCCTCCCGCCATTGTTGAGGCTTCCTCCGAGTTTAAAGTGGGCGATGATTTGGGTTGGCAGCTTCCTGACAAAAACAACACTGGAGCTTACAATTTCTGGGCTGAAATGAACAGGTTCCATATTGGAGATTCACTTGTTTTCGAGTACACCAACGATTCTGTTCTCGTGGTGGAGAAATGGGACTACTATCACTGCAACACAAACGACGCCATAGTCGAGTTTGACAATGGCAAGAGCGTTATCCAGCTAGACAGGTCAGGCCCTTTCTATTTCATCAGCGGCGACTCAGATCACTGCAAGAAAGGCCAGAGAATGATTGTCGAGGTGATGTCCCCACATCACCTGTCTCCGCCTGCCATTGCAGCTCCTCCATACCCTTCATCCACGTCGGCTCCCTCTCCGTCAATGTCTTTAGCTCCGGCGACCCGGTTTCAGCATCTTTTCGTTCAGTCTCTGTGCTTCTTGCTGTCGCACTTGGAGCTCTAG 546 50.18 MAFSLLPFCCICLGVFFVLCPPAIVEASSEFKVGDDLGWQLPDKNNTGAYNFWAEMNRFHIGDSLVFEYTNDSVLVVEKWDYYHCNTNDAIVEFDNGKSVIQLDRSGPFYFISGDSDHCKKGQRMIVEVMSPHHLSPPAIAAPPYPSSTSAPSPSMSLAPATRFQHLFVQSLCFLLSHLEL 181
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 42676791 42677425 - Bda015499.1 Bda10g00828 14716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda10g00828 181 ProSiteProfiles Phytocyanin domain profile. 29 131 IPR003245 GO:0009055
Bda10g00828 181 SUPERFAMILY Cupredoxins 29 130 IPR008972 -
Bda10g00828 181 Pfam Plastocyanin-like domain 48 123 IPR003245 GO:0009055
Bda10g00828 181 PANTHER EARLY NODULIN-LIKE PROTEIN 2 20 150 - -
Bda10g00828 181 CDD OsENODL1_like 30 130 IPR041846 -
Bda10g00828 181 Gene3D - 28 133 IPR008972 -
Bda10g00828 181 PANTHER BLUE COPPER PROTEIN 20 150 IPR039391 GO:0009055
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda10g00828 Bda12g00590 CCT
Bda04g00879 Bda10g00828 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda07g00343 Bda-Chr7:4485962 Bda10g00828 Bda-Chr10:42676791 1.42E-24 dispersed
Bda10g00828 Bda-Chr10:42676791 Bda13g01640 Bda-Chr13:39873479 1.35E-31 dispersed
Bda10g00828 Bda-Chr10:42676791 Bda04g00879 Bda-Chr4:58578570 3.09E-69 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda10g00828 - - qsu:112010402 182.185