Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda10g00831 ATGGCGATGTTCTGCAAGGAAGGTCAAAAAATAGGACTGGATAATGGTAAATATGTGAGGTACACACCTGAGCAGGTCGAAGCCCTTGAGAGGCTCTATCATGACTGTCCCAAACCCAGTTCGATTCGTCGCCAGCAGCTCATCAGAGAGTGCCCCATTCTCTCCAACATTGAGCCTAAGCAAATCAAAGTCTGGTTTCAAAACCGACGATGCAGAGAGAAGCAAAGGAAAGAAGCGTCAAGACTTCAAGCTGTCAATCGGAAGCTTACGGCAATGAATAAGCTCTTAATGGAGGAGAATGATCGGTTGCAGAAGCAGGTTTCGCAGCTGGTATATGAAAACGGATACTTCCGTCAGCACACCCAGAGTGCGACGCTTGCTAACAAAGACACTGGTGAAGCTGTGATGACTACCGGTCAGCACAATTTGACAACTCAGCATCCGCCAAGAGATGCTAGTCCTGCAGGGCTGTTGTCCATTGCAGAAGAAACTTTAACAGAGTTTCTTTCAAAGGCCACTGGAACTGCTGTAGAGTGGGTCCAAATGCCTGGAATGAAGCCTGGTCCGGATTCCATTGGAATCGTTGCTATTTCTCATGGTTGTGCTGGAGTTGCAGCACGAGCCTGCGGTCTGGTCGGCCTGGAGCCTACTAGGGTTGCAGAAATCCTTAAGGATCTTCCATCTTGGTTTCGCGATTGTCGAGCTGTGGATGTACTTAATGTGCTGCCGACTGCAAATGGTGGAACCATTGAGTTGCTTTATATGCAGATGTATGCCCCAACAACATTGGCACCTGCTCGTGATTTCTGGTTGCTTCGCTACACTTCTGTTTTAGAAGATGGCAGCCTTGTGATCTGTGAAAGATCACTTAAGAACACTCAGAATGGTCCAACTATGCCTTCAGTGCAGCATTTTGTCAGAGCGGAGATGCTCCCAAGTGGGTATCTGATTCGACCATGTGAAGGAGGCGGCTCAATTATACACATTGTGGATCATATAGATTTGGAGCCTTGGAGTGTACCAGAAGTGTTGCGACCATTGTATGAATCATCTACTATTCTTGCCCAAAAGACAACAATGGCGGCTCTGCGCCAGTTGAGGCAGATCGCCCATGAGGTTTCCCAGTCTAATGTAACAGGCTGGGGTAGACGACCAGCAGCCCTTCGCGCTCTTAGTCAGAGATTGACAAGGGGTTTTAATGAGGCACTTAATGGGTTTACTGATGAGGGATGGTCAGTGATCGGAAGTGATGGCATGGATGATGTTACTATCCTTGTGAACTCATCTCCTGACAAACTAATGGGTTTGAATCTTTCATTTGGAAATGGATTTTCAGCTGTGAGCAATGCTGTCTTATGTGCCAAAGCATCAATGTTATTGCAGAACGTACCTCCTGCAATCCTTCTTCGTTTTCTACGGGAGCACCGGTCAGAATGGGCAGACATCAATATGGATGCTTATTCGGCTGCAGCTATCAAGGTTGGTCCATGTAGTTTACCAGGGACTCGAGTTGGAAGTTTTGGAAGTCAAGTCATACTTCCATTGGCTCACACTATTGAACATGAAGAGTGCATGGAAGTCATTAAGCTTGAAGGTGTTGGCCATTCTCCTGAAGAGGCGATGTTGCCAAGAGAAATGTTTCTCTTGCAACTCTGCAGTGGGATGGATGAAAGTGCTGTTGGCACGTGTGCAGAACTAATATTCGCTCCAATTGATGCATCTTTTGCTGATGATGCACCTCTTTTACCATCAGGATTTCGCATTATACCTCTTGATTCAGGGAAGGAAGCGGCTAGTCCGAATCGCACCCTTGACCTTGCTTCTGCTCTTGAAATTGGGGCTGCTGGAAACAGAGCACTGAATGATTGTTCTGTGAATTCTGGGTGTACAAGGTCTGTGATGACGATAGCGTTTGAATTTGCATTCGAGAACCACATGCAAGAACACGTAGCCTCAATGGCTCGACAATATGTACGGAACATCATATCATCGGTTCAGAGGGTAGCGTTGGCTCTTTCTCCTCATTTGAATTCACCAGCCGGTCTCCGTCCTCCACTCGGCACTCCCGAAGCACAGACCCTTGCTAAATGGATCTGCAACAGCTACAGGGCCTACTTGGGTGTTGATTTGCTGAAATCTGGAAATGAAGGGAGCGAATATATTCTCAAAGCATTATGGCATCATTCGGATGCAATCATGTGCTGCTCCCTTAAGGCATTGCCAGTTTTCACTTTTGCAAACCAGGCGGGGCTAGATATGCTTGAAACCACCTTAGTTGCGTTACAAGACATAACTTTAGAGAAGATATTCGATGATCACGGAAGGAAGTCTCTCTGCTCCGAGTTTCCGCAGATAATGCAGCAGGGATTCACTTGCCTTCAAGGCGGTATATGCCTGTCAAGCATGGGCCGACCGATCTCCTATGAACGGGCAGTTGCTTGGAAAGTGGTGAACGAAGAAGAGACTGCTCACTGCATCTGCTTCATGTTTGTGAACTGGTCGTTTGTCTAA 2511 47.07 MAMFCKEGQKIGLDNGKYVRYTPEQVEALERLYHDCPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSATLANKDTGEAVMTTGQHNLTTQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCAGVAARACGLVGLEPTRVAEILKDLPSWFRDCRAVDVLNVLPTANGGTIELLYMQMYAPTTLAPARDFWLLRYTSVLEDGSLVICERSLKNTQNGPTMPSVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHIDLEPWSVPEVLRPLYESSTILAQKTTMAALRQLRQIAHEVSQSNVTGWGRRPAALRALSQRLTRGFNEALNGFTDEGWSVIGSDGMDDVTILVNSSPDKLMGLNLSFGNGFSAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADINMDAYSAAAIKVGPCSLPGTRVGSFGSQVILPLAHTIEHEECMEVIKLEGVGHSPEEAMLPREMFLLQLCSGMDESAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKEAASPNRTLDLASALEIGAAGNRALNDCSVNSGCTRSVMTIAFEFAFENHMQEHVASMARQYVRNIISSVQRVALALSPHLNSPAGLRPPLGTPEAQTLAKWICNSYRAYLGVDLLKSGNEGSEYILKALWHHSDAIMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKSLCSEFPQIMQQGFTCLQGGICLSSMGRPISYERAVAWKVVNEEETAHCICFMFVNWSFV 836
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 42695627 42700967 + Bda015502.1 Bda10g00831 14719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda10g00831 836 SUPERFAMILY Bet v1-like 159 370 - -
Bda10g00831 836 SMART START_1 159 369 IPR002913 GO:0008289
Bda10g00831 836 CDD START_ArGLABRA2_like 154 370 - -
Bda10g00831 836 ProSiteProfiles 'Homeobox' domain profile. 12 76 IPR001356 GO:0003677
Bda10g00831 836 PANTHER CLASS III HD-ZIP PROTEIN CNA1 1 836 - -
Bda10g00831 836 Pfam START domain 160 368 IPR002913 GO:0008289
Bda10g00831 836 Pfam Homeodomain 17 75 IPR001356 GO:0003677
Bda10g00831 836 Gene3D - 195 375 IPR023393 -
Bda10g00831 836 CDD bZIP 69 108 - -
Bda10g00831 836 Gene3D - 12 83 - -
Bda10g00831 836 CDD homeodomain 17 77 IPR001356 GO:0003677
Bda10g00831 836 SMART HOX_1 14 80 IPR001356 GO:0003677
Bda10g00831 836 SUPERFAMILY Homeodomain-like 16 80 IPR009057 -
Bda10g00831 836 Coils Coil 72 113 - -
Bda10g00831 836 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 1 836 IPR044830 GO:0003700
Bda10g00831 836 ProSiteProfiles START domain profile. 150 365 IPR002913 GO:0008289
Bda10g00831 836 Pfam MEKHLA domain 693 835 IPR013978 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda05g00570 Bda10g00831 CCT
Bda05g00570 Bda10g00831 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda02g00472 Bda-Chr2:45621679 Bda10g00831 Bda-Chr10:42695627 0 dispersed
Bda03g00434 Bda-Chr3:3749638 Bda10g00831 Bda-Chr10:42695627 0 dispersed
Bda09g01188 Bda-Chr9:42819141 Bda10g00831 Bda-Chr10:42695627 0 dispersed
Bda10g00831 Bda-Chr10:42695627 Bda11g00826 Bda-Chr11:8184574 0 dispersed
Bda10g00831 Bda-Chr10:42695627 Bda05g00570 Bda-Chr5:53579833 4.33E-23 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
16523 PF01852 START 8.20E-55 CL0209 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda10g00831 K09338 - csv:101213106 1554.27