Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda10g00864 | ATGTCAGGTTTAGCTCCAGAAGGATCCCAGTTTGATGCCAATCAATATGATTCCAAAATGATTGAGATACAATCTGAAGGACATGATTTCTTCACCTCTTATGAAGAAGTTTATGAAAGCTTTGATTCTATGGGTTTACAAGAAAACCTGCTGAGGGGCATTTATGCCTATGGTTTTGAGAAGCCCTCTGCAATCCAGCAAAGGGGAATTGTTCCTTTCTGCAAAGGTCTTGATGTGATTCAACAGGCTCAATCTGGAACTGGAAAAACTGCAACCTTTTGCTCTGGAATTTTACAGCAACTCGACTATGGTTTAGTTCAGTGCCAGGCACTGGTTCTAGCACCCACAAGGGAACTGGCTCAACAGATTGAGAAGGTCATGCGAGCTCTAGGTGATTATCTTGGTGTCAAGGTTCATGCTTGTGTTGGAGGGACCAGTGTACGTGAGGATCAACGCATTCTTCAAGTCGGGGTGCATGTTGTTGTTGGTACTCCTGGTCGAGTATTTGACATGTTGCAAAGACAGTCTCTCCGCCCAGACTACATTAAGATGTTTGTTTTGGATGAGGCTGATGAGATGCTTTCGCGTGGATTCAAGGATCAGATTTACGACATTTTCCAGCTTTTGCCATCAGAAGTTCAGGTTGGAGTTTTCTCAGCAACAATGCCACCTGAAGCTCTGGAAATCACAAGGAAGTTTATGAAGAAGCCTGTAAGAATCTTGGTGAAGCGTGATGAACTTACTTTGGAAGGTATCAAGCAGTTCTATGTTGATGTTGACAAGGAAGATTGGAAACTTGACACACTATGTGATCTTTATGAGACTCTGGCCATCACCCAGAGCGTCATCTTTGTCAACACACGACGCAAGGTGGATTGGCTGACAGACAAGATGCGCAGTCGGGATCACACAGTATCAGCCACCCATGGAGACATGGACCAGAACACCAGAGATATAATTATGCGAGAATTCCGCTCTGGGTCTTCTCGTGTTCTCATAACAACTGATCTTCTGGCTCGTGGTATTGATGTCCAGCAAGTTTCACTTGTTATAAACTACGATCTGCCGACACAACCAGAAAATTACCTTCATCGAATTGGTCGAAGCGGACGATTTGGAAGAAAGGGGGTCGCCATCAACTTTGTGACAAGCGATGATGGCAGAATGATATCCGACATTCAGAAGTTTTACAACGTGGTAATCGAGGAGCTGCCGGCTAACGTTGCTGATCTCCTGTGA | 1239 | 44.63 | MSGLAPEGSQFDANQYDSKMIEIQSEGHDFFTSYEEVYESFDSMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQVGVHVVVGTPGRVFDMLQRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPSEVQVGVFSATMPPEALEITRKFMKKPVRILVKRDELTLEGIKQFYVDVDKEDWKLDTLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTSDDGRMISDIQKFYNVVIEELPANVADLL | 412 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 43138489 | 43140165 | - | Bda015541.1 | Bda10g00864 | 14752 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda10g00864 | 412 | ProSitePatterns | DEAD-box subfamily ATP-dependent helicases signature. | 186 | 194 | IPR000629 | - | |
Bda10g00864 | 412 | Pfam | Helicase conserved C-terminal domain | 265 | 373 | IPR001650 | - | |
Bda10g00864 | 412 | PANTHER | RNA HELICASE | 23 | 412 | - | - | |
Bda10g00864 | 412 | SMART | ultradead3 | 58 | 255 | IPR014001 | - | |
Bda10g00864 | 412 | CDD | DEADc_EIF4A | 44 | 241 | - | - | |
Bda10g00864 | 412 | ProSiteProfiles | DEAD-box RNA helicase Q motif profile. | 39 | 67 | IPR014014 | GO:0003724 | |
Bda10g00864 | 412 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 108 | 392 | IPR027417 | - | |
Bda10g00864 | 412 | Gene3D | - | 29 | 247 | IPR027417 | - | |
Bda10g00864 | 412 | PANTHER | EUKARYOTIC INITIATION FACTOR 4A-2 | 23 | 412 | - | - | |
Bda10g00864 | 412 | Gene3D | - | 248 | 412 | IPR027417 | - | |
Bda10g00864 | 412 | SMART | helicmild6 | 292 | 373 | IPR001650 | - | |
Bda10g00864 | 412 | ProSiteProfiles | Superfamilies 1 and 2 helicase C-terminal domain profile. | 251 | 412 | IPR001650 | - | |
Bda10g00864 | 412 | Pfam | DEAD/DEAH box helicase | 64 | 225 | IPR011545 | GO:0003676|GO:0005524 | |
Bda10g00864 | 412 | CDD | SF2_C_DEAD | 252 | 382 | - | - | |
Bda10g00864 | 412 | ProSiteProfiles | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 70 | 240 | IPR014001 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda01g00999 | Bda-Chr1:43582058 | Bda10g00864 | Bda-Chr10:43138489 | 1.62E-65 | dispersed | |
Bda10g00864 | Bda-Chr10:43138489 | Bda13g00354 | Bda-Chr13:4397992 | 1.98E-85 | dispersed | |
Bda05g00426 | Bda-Chr5:49979059 | Bda10g00864 | Bda-Chr10:43138489 | 0 | transposed | |
Bda05g01202 | Bda-Chr5:60007131 | Bda10g00864 | Bda-Chr10:43138489 | 1.23E-67 | transposed | |
Bda10g00205 | Bda-Chr10:7017277 | Bda10g00864 | Bda-Chr10:43138489 | 1.32E-09 | transposed | |
Bda13g01595 | Bda-Chr13:39516012 | Bda10g00864 | Bda-Chr10:43138489 | 0 | transposed | |
Bda10g00864 | Bda-Chr10:43138489 | Bda05g00585 | Bda-Chr5:53837001 | 2.59E-65 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda10g00864 | K03257 | - | csv:101223055 | 775.393 |