Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda10g00866 ATGTTTCCTGCAGTTTCCATGACTCTTAGATTAGGCGATTCAAAGTCTGATATCTCTGAAAGCACAAACCATATGGAAATCACATGGCTCAAGCTGGTAACAGACAAAGCAAATTTGCCTGTGAAAAGTGGAAAAGAAATTTTTCAAGGCGACCGGCTTGAGTTTAATCAGGCGTCGGCACCAGAAACAGATCAGGGGATTGTTGATTTGCTAGAGAGCGGAAAGTTTTCCGCCGCTTCCGATGGTATGATTGTAGAAAACAAAGACGATCAAACTTTATCCGTGGTGGAGGTCGCAAATGGAGTTATTGGGAAGGATGGAATGTTATCTGATGTTGGATCCGAAATTAGGCTGCCGGGTGTAGCAGAAATTAAGGATGTCAGTATTGATATTGGCCATTTTGTTACCAAAGCTCTTATTCTAGTGAAACCAGTACAAGTGCCATCTATGGAATTTATCGTGGCTTCAGTGAGCTCGGATTCAGATATAGTTCAGAATTCGGAGCTTAAATCCTCCAAAGTCGTTTACGAATTGAACGGAGAAAAGAACGTAGGAAGCCTCATACGTGCTGTGTTTGAGCTGAATTGTCTTCCTCTGTGGGGCTCAGTATCGATCAGTGGAAGACGACCGGAAATGGAAGATGAAATTACTGCTATTCCTAATTTTCTGAACATTCCTGCCAAATTGCTTATCTGCAAGAACACAAGTGAGGGTCATAGCCAAAATTTGGCCCATTTTCAAAGTCACTTTTATGGCGTTTATGATGGCCACGGTGGATCTCAGGTTGCTAATTACTGTCGTGAGCAACTTCATTTGGCTCTAGCTGACGAGATCGGAGCCATTGAGGACGGTTTAACCGATGGAGACATGGAGGAGAATACAGAGGAGCAATGGAAAGGAATATTCACCAATTGCTTTATGAAGGTTGACGACCAAATCGGAGGAATCGTCGGGAACAGAGTAGTATCCAGACCAATCGTCCCTGAAACTGTGGGATCCACTGCCGTGGTGGCATTAGTCTGTCCAACGCATATCATTGTGGCAAACTGTGGGGATTCAAGAGCAGTCCTCTGCCGTGGCAAAAAACCAATCCCATTATCCGTTGATCACAAACCAAATAGAGAAGATGAGTTCATGAGGATCGAAGAGTCAGGTGGAAAGGTCATCCAATGGAACGGTCATCGTGTTTTTGGAGTTCTCGCGATGTCGAGGGCCATTGGTGATCGATATTTGAAGCCATGGATCATTCCGGACCCAGAAATCACAATGACATCTCGGACTCGAGAGGACGACTTGCTTATCTTGGCAAGTGATGGGCTATGGGACGTTGTGACAAACGAGGAAGCATGTGAAGCGGCTCGAAGGCGGATTATGCTATGGCACAAGAAAAACGAGTCGAACGACATCACGGAAAAAAGAGGGGCAGGGGTTGATCCAGCTGCACAGGCAGCTGCCGATTACCTAGCAAGCCTTGCACTTCAGAGGGGAAGCAGAGACAACATCTCTGTGATTGTGGTGGACTTGAAAGCCAGAAGAAAGGTCAAGGCCAAAACTTGA 1557 45.6 MFPAVSMTLRLGDSKSDISESTNHMEITWLKLVTDKANLPVKSGKEIFQGDRLEFNQASAPETDQGIVDLLESGKFSAASDGMIVENKDDQTLSVVEVANGVIGKDGMLSDVGSEIRLPGVAEIKDVSIDIGHFVTKALILVKPVQVPSMEFIVASVSSDSDIVQNSELKSSKVVYELNGEKNVGSLIRAVFELNCLPLWGSVSISGRRPEMEDEITAIPNFLNIPAKLLICKNTSEGHSQNLAHFQSHFYGVYDGHGGSQVANYCREQLHLALADEIGAIEDGLTDGDMEENTEEQWKGIFTNCFMKVDDQIGGIVGNRVVSRPIVPETVGSTAVVALVCPTHIIVANCGDSRAVLCRGKKPIPLSVDHKPNREDEFMRIEESGGKVIQWNGHRVFGVLAMSRAIGDRYLKPWIIPDPEITMTSRTREDDLLILASDGLWDVVTNEEACEAARRRIMLWHKKNESNDITEKRGAGVDPAAQAAADYLASLALQRGSRDNISVIVVDLKARRKVKAKT 518
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 43167648 43169557 + Bda015543.2 Bda10g00866 14754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda10g00866 518 PANTHER ALPHABET, ISOFORM E-RELATED 102 518 - -
Bda10g00866 518 SUPERFAMILY PP2C-like 192 509 IPR036457 -
Bda10g00866 518 Pfam Protein phosphatase 2C 235 501 IPR001932 -
Bda10g00866 518 SMART PP2C_4 189 506 IPR001932 -
Bda10g00866 518 CDD PP2Cc 201 508 IPR001932 -
Bda10g00866 518 ProSiteProfiles PPM-type phosphatase domain profile. 199 508 IPR001932 -
Bda10g00866 518 PANTHER PROTEIN PHOSPHATASE 2C 16 102 518 - -
Bda10g00866 518 ProSitePatterns PPM-type phosphatase domain signature. 250 258 IPR000222 GO:0043169
Bda10g00866 518 Gene3D - 186 518 IPR036457 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g00136 Bda-Chr3:1182055 Bda10g00866 Bda-Chr10:43167648 8.44E-147 dispersed
Bda07g00571 Bda-Chr7:7048753 Bda10g00866 Bda-Chr10:43167648 6.07E-73 dispersed
Bda08g00467 Bda-Chr8:4883071 Bda10g00866 Bda-Chr10:43167648 6.07E-74 dispersed
Bda09g01128 Bda-Chr9:41965633 Bda10g00866 Bda-Chr10:43167648 3.42E-86 dispersed
Bda10g00866 Bda-Chr10:43167648 Bda01g00652 Bda-Chr1:33517281 6.92E-42 dispersed
Bda10g00866 Bda-Chr10:43167648 Bda14g00146 Bda-Chr14:997516 2.29E-81 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda10g00866 K14497 - jre:109011728 559.296