Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda10g00867 ATGAACTTGGGTGCGGAGGAGGAAGAATCGACGCAAGAGATACATATTCCTGCGGACGTCGATTGGGAGATGCTTGACAAATCAAAGTTTTTCTTCCTCGGCGCCGCCTTATTTTCAGGTGTGTCCGCGTCTCTGTACCCTATTGTGGTGTTGAAAACCCGGCAACAAGTGGCTCAATCGCAGCTCTCTTGCATCAGAACGGCGTTCTCCATTGTTCGACACGAGGGGTTTCGAGCTCTGTACAGAGGATTCGGAACTTCCCTGATGGGAACTATCCCAGCAAGAGCTCTATACATGGGCGCACTCGAGGTCACCAAGAGCAACATATGGACTGCAACCGTTAGGTTAGGGGTTCCCGAGGCAACTGCCGCGACCATTGCCAATGCTGCAGCTGGGTTGAGCGCAGCCGTGGCTGCACAGGTTGTGTGGACTCCTGTGGATGTTGTGAGCCAGAGACTAATGGTTCAGAGTGGGTGTAGTAGTAGCGGTAGTAGTAAAATTTCAAATGCTTCGCCTTGTAGGTATCTTAATGGAATCGATGCATTTAGAAAAATCCTCAACACAGATGGCCCGAGGGGTCTGTACAGGGGTTTTGGGATCTCAATTCTGACTTACGCTCCCTCAAATGCACTTTGGTGGGCATCATACTCGATGGCGCAGCAGCTGGTTTGGGGCGGAATCGGATGCTATTTCGTGAAGAAAGACGAGGATGGTGATGGAAATAAGCCTAATGTGTTTCGGCCCGATTCGAAAACCATAATGGCTGTTCAGGGACTCAGTGCAGCCATGGCTGGGGGCTTTTCGGCTTTAATAACTATGCCTCTAGACACAATCAAGACAAGATTGCAGGTTTTGGATGGCGAGGAAAACGGAAGACCGAGACCCTCGATCGGACAGACGGTGAGGAATTTGGTGAAGGAAGGCGGCTGGTCGGCCTGTTACAGAGGGTTGGGACCTCGGTGGGCTTCCATGTCAATGTCTGCTACGACCATGATCACTACCTATGAGTTTCTGAAGCGGCTCTCCACCAAAAATCAAGACGGGTTCACTGGCTGA 1056 51.14 MNLGAEEEESTQEIHIPADVDWEMLDKSKFFFLGAALFSGVSASLYPIVVLKTRQQVAQSQLSCIRTAFSIVRHEGFRALYRGFGTSLMGTIPARALYMGALEVTKSNIWTATVRLGVPEATAATIANAAAGLSAAVAAQVVWTPVDVVSQRLMVQSGCSSSGSSKISNASPCRYLNGIDAFRKILNTDGPRGLYRGFGISILTYAPSNALWWASYSMAQQLVWGGIGCYFVKKDEDGDGNKPNVFRPDSKTIMAVQGLSAAMAGGFSALITMPLDTIKTRLQVLDGEENGRPRPSIGQTVRNLVKEGGWSACYRGLGPRWASMSMSATTMITTYEFLKRLSTKNQDGFTG 351
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 43170391 43171446 + Bda015544.1 Bda10g00867 14755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda10g00867 351 Pfam Mitochondrial carrier protein 126 223 IPR018108 -
Bda10g00867 351 Pfam Mitochondrial carrier protein 256 345 IPR018108 -
Bda10g00867 351 Pfam Mitochondrial carrier protein 38 109 IPR018108 -
Bda10g00867 351 ProSiteProfiles Solute carrier (Solcar) repeat profile. 26 108 IPR018108 -
Bda10g00867 351 Gene3D Mitochondrial carrier domain 29 349 IPR023395 -
Bda10g00867 351 SUPERFAMILY Mitochondrial carrier 23 338 IPR023395 -
Bda10g00867 351 PRINTS Mitochondrial carrier protein signature 132 154 IPR002067 GO:0055085
Bda10g00867 351 PRINTS Mitochondrial carrier protein signature 81 99 IPR002067 GO:0055085
Bda10g00867 351 ProSiteProfiles Solute carrier (Solcar) repeat profile. 123 222 IPR018108 -
Bda10g00867 351 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER-LIKE PROTEIN 1 347 - -
Bda10g00867 351 ProSiteProfiles Solute carrier (Solcar) repeat profile. 252 341 IPR018108 -
Bda10g00867 351 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 1 347 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g00634 Bda-Chr1:33332162 Bda10g00867 Bda-Chr10:43170391 3.09E-161 dispersed
Bda07g01034 Bda-Chr7:12192340 Bda10g00867 Bda-Chr10:43170391 2.05E-76 dispersed
Bda10g00867 Bda-Chr10:43170391 Bda12g00204 Bda-Chr12:2014370 7.13E-88 dispersed
Bda10g00867 Bda-Chr10:43170391 Bda03g00133 Bda-Chr3:1171354 7.62E-169 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda10g00867 K15121 - mnt:21396625 555.058