Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda10g00882 ATGATTTTTGAGAGCGATAGGGAGGAGATTGATCGCTACTTACAGGCCGTTGATGAAATTCAACGCTCTGCGTCTTCTGTTTCCTTATCCGATGACCAATCTAAAGTCAACTCCACCATCCAGATCGCCATGGCTCGCCTCGAGGACGAGCTCCGAAATATCCTCATCACCCACACCAACCCCATCGAGGCTGAATCCCTCACCGATCCGACCCCTTCCACTCCCTCCGCCTCCGTCCACAGTTGCAATTTTAAGGATGAAAATGAAGACGAGGCTGTTATTTCCGTCGTAGATGACCTCAGTTTCAGTGACAGTCCAAGTTACCGCTCCAGCTGTCGATCCAGCTACCGATCGACAAGTAGTATTCACGAGATCGATCTGATACCTTCCGATGCCATCTTCGATCTCAGAAGCATCGCTGAGCGAATGATTGCGGCTGGCTACTTGCGAGAGTGTATCCAAGTGTATGCCAACGTGCGAAAGTCTACCTTCGACGCGAGCTTTCGGATGCTCGGCGTCGAAAGATTAAGCATCGGAGATATACAGAAGCTGGACTGGTCCGAGCTGGAGACGAAGATCAGAAGGTGGATAAAGGCCGCAAGAGTTTGTGTTAGGATTCTTTTTGCGAGTGAGAAGAAGCTCTGCGAGCAGATCTTCTATGGTATAGGTACCGCCATCGACGATGCTTGTTTTATGGAGACAGTAAAGGGCCCGGCCATCCAGCTATTTAATTTTGCAGAGGCGATTAGCATAAGTGGCAGGTCACCTGAAAAGTTGTTTAAGATTTTAGACCTTCATGATGCGTTATTGAATATGATACCTGACATTGAGGAAGTATTCGAATCCAAATCGGCGGAGTCAATTAGGGTTCAGGCATCAGAGATTCTGTCTCGGTTGGGGGAGGCAGTCAGGGGCATTATCTCAGAATTCGAGCATGCTGTTCTCAGCGAGCCCTCATTGTTGCCGGTGCCAGGCGGGACAATGCACCCTTTGACAAGGTACGTGATGAACTACATTGGTTTGATTTCTGATTACAAGCGAACCTTAAGTGAGCTTATAGTATCAAATCCCTCTCCGGGGTCGAGATACTCTGGCAATGCTGTGAACCCTCCTGATGTGGAGTTTGCAGAAATAGAAGGTAAATCCCCATTAGAGCTCCATTTGATTTGGATGATTGTAATTCTGCTATTTAATTTGGAGGGGAAGTCCAGGCACTACCAAGATATTTCGTTGGCACACTTGTTTATCATGAACAATGTTCACTACATTGTTCAGAAAATAAAAAGATCATCCGATCTGAGAGAAATGATTGGGGATGTTTATCTGAAGAAATGGACCGGCAAATATCGACAGGCTGCAACCTGCTACCAGAGAGCAACCTGGGTGAAGGTGTTATCGTGCTTAAAGGACGAGGGGTTGCATGTAAGTGGGAGTTTCTCTTCAGGGGTCTCAAAGAGTGCTTTGAGAGAGAGGTTTAAGACCTTTAATGCTATGTTTGATGAGGTTCATAGGACTCAAGCCAGTTGGTTTATCCCAGATTCTCAGCTCAGAGAGGAGCTACGCATATCTATAGCAGAAAAGTTAATCCCTGCTTATAGAGCATTTCTTGGGCGGTTCAGGCAGTATATCGAGAGCGGAAAGCACCCAGAAAACTACATTAAGTACTCGGAGGAGGATTTGGAGAATGCTGTCTTGGATTTCTTCGAGGGTTACCCAGTATCCCAGCATTTTAGGAGGAGATCTTGA 1746 46.74 MIFESDREEIDRYLQAVDEIQRSASSVSLSDDQSKVNSTIQIAMARLEDELRNILITHTNPIEAESLTDPTPSTPSASVHSCNFKDENEDEAVISVVDDLSFSDSPSYRSSCRSSYRSTSSIHEIDLIPSDAIFDLRSIAERMIAAGYLRECIQVYANVRKSTFDASFRMLGVERLSIGDIQKLDWSELETKIRRWIKAARVCVRILFASEKKLCEQIFYGIGTAIDDACFMETVKGPAIQLFNFAEAISISGRSPEKLFKILDLHDALLNMIPDIEEVFESKSAESIRVQASEILSRLGEAVRGIISEFEHAVLSEPSLLPVPGGTMHPLTRYVMNYIGLISDYKRTLSELIVSNPSPGSRYSGNAVNPPDVEFAEIEGKSPLELHLIWMIVILLFNLEGKSRHYQDISLAHLFIMNNVHYIVQKIKRSSDLREMIGDVYLKKWTGKYRQAATCYQRATWVKVLSCLKDEGLHVSGSFSSGVSKSALRERFKTFNAMFDEVHRTQASWFIPDSQLREELRISIAEKLIPAYRAFLGRFRQYIESGKHPENYIKYSEEDLENAVLDFFEGYPVSQHFRRRS 581
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 43275896 43277641 - Bda015561.1 Bda10g00882 14770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda10g00882 581 Pfam Exo70 exocyst complex subunit 195 564 IPR046364 GO:0000145|GO:0005546|GO:0006887
Bda10g00882 581 Gene3D Exocyst complex component Exo70 1 84 - -
Bda10g00882 581 Gene3D Exocyst complex component Exo70 85 578 - -
Bda10g00882 581 SUPERFAMILY Cullin repeat-like 5 569 IPR016159 -
Bda10g00882 581 PANTHER EXOCYST COMPLEX PROTEIN EXO70 1 581 IPR004140 GO:0000145|GO:0006887
Bda10g00882 581 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 1 581 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda04g00941 Bda10g00882 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda08g00172 Bda-Chr8:1577840 Bda10g00882 Bda-Chr10:43275896 3.07E-105 dispersed
Bda10g00882 Bda-Chr10:43275896 Bda14g01366 Bda-Chr14:16027255 2.24E-152 dispersed
Bda14g00320 Bda-Chr14:2159630 Bda10g00882 Bda-Chr10:43275896 2.53E-104 dispersed
Bda10g00882 Bda-Chr10:43275896 Bda04g00941 Bda-Chr4:59137876 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda10g00882 K07195 - mnt:21391539 857.44