Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda10g00910 | ATGCCGTCCGTCTACGGAGCTCGTTTGACTACCTTTGAAGATTCTGACAAGGAAAAGGAGTATGGATACGTCCGCAAGGTGTCAGGACCTGTTGTGGTTGCCGATGGTATGGCTGGTGCTGCCATGTATGAATTGGTTCGGGTTGGCCACGATAATTTAATTGGTGAAATCATTCGATTAGAAGGAGATTCTGCTACAATCCAAGTTTATGAGGAAACAGCTGGACTGATGGTGAATGACCCAGTTTTGAGAACACATAAGCCTTTGTCGGTGGAGTTGGGACCTGGAATACTAGGAAATATATTTGATGGAATTCAGAGGCCTTTGAAAACTATTGCAAAAAGATCCGGAGATGTATACATTCCTCGTGGTGTTTCAGTCCCAGCACTTGACAAAGACATACTATGGGATTTTCAACCAAAAAAACTTGGTAGTGAAGGTGATCTATTAACAGGTGGAGACTTGTATGCTACTGTCTTTGAGAATAGTTTAATGCAGCACCATATTGCGCTGCCTCCTAACTCTATGGGAAAAATTACTTACATTGCACCACCTGGTCAATATTCATTGAAGGATACTGTGTTAGAGCTGGAGTTTCAAGGTGTTAAAAAGCAATTTACCATGCTTCAGACATGGCCTGTACGTACACCTAGGCCAGTTGCATCAAAGCTTGCAGCTGATACCCCTCTGCTTACTGGTCAGCGTGTTCTTGATGCTCTCTTTCCGTCTGTTCTTGGTGGAACTTGTGCCATACCTGGAGCATTTGGTTGTGGAAAAACTGTCATTAGTCAAGCTCTTTCTAAGTACTCAAATTCCGACACTGTTGTTTATGTTGGTTGTGGGGAGAGAGGAAATGAAATGGCAGAGGTTCTTATGGATTTTCCGCAACTGACAATGACATTACCTGATGGCCGTGAAGAATCTGTCATGAAACGTACTACACTTGTGGCAAACACTTCTAACATGCCTGTGGCTGCCCGTGAGGCTTCAATATATACTGGAATTACTATTGCTGAATACTTCAGAGATATGGGGTACAATGTCAGTATGATGGCAGATTCGACTTCTCGCTGGGCAGAAGCATTGCGTGAGATATCTGGACGACTGGCAGAAATGCCTGCAGATAGTGGCTACCCAGCTTATCTTGCGGCACGTTTAGCTTCTTTTTATGAGCGAGCGGGCAAAGTAAAATGTCTGGGAGGACCAGAACGTAATGGCAGTGTCACAATTGTTGGTGCTGTTTCACCTCCGGGAGGAGATTTTTCTGATCCTGTGACATCTGCAACCCTCAGCATTGTACAGGTTTTCTGGGGACTTGACAAAAAGCTTGCTCAGAGAAAGCATTTCCCATCTGTTAACTGGCTTATTTCCTACTCAAAATACTCAACTGCATTGGAATCCTTTTATGAGCAGTTTGACCAAGATTTTATTAGCATTAGGACGAAGGCCCGTGAGGTGCTACAAAGAGAAGATGACCTTAATGAGATTGTTCAACTTGTAGGAAAAGATGCCTTAGCTGAAGGAGATAAAATTACACTCGAGACTGCAAAACTTTTGAGAGAAGACTATCTAGCACAGAATGCATTTACTCCATATGATAAATTCTGCCCGTTCTATAAGTCTGTTTGGATGATGCGCAACATCATTCATTTCTATAATTTGGCCAATCAGGCAGTGGAAAGAGGCGCTGGCATGGATGGGCAGAAGATAACATACACTCTGATTAAGCATCGATTGGGAGATCTTTTTTATCGTCTGGTGTCTCAAAAATTTGAGGACCCAGCAGAAGGAGAAGAAGCTCTTGTTTCGAAATTTAAGAAGCTGCACGACGATCTGACGAATGGCTTCTGGGCACTTGAAGACGAAAGTCGATGA | 1875 | 43.36 | MPSVYGARLTTFEDSDKEKEYGYVRKVSGPVVVADGMAGAAMYELVRVGHDNLIGEIIRLEGDSATIQVYEETAGLMVNDPVLRTHKPLSVELGPGILGNIFDGIQRPLKTIAKRSGDVYIPRGVSVPALDKDILWDFQPKKLGSEGDLLTGGDLYATVFENSLMQHHIALPPNSMGKITYIAPPGQYSLKDTVLELEFQGVKKQFTMLQTWPVRTPRPVASKLAADTPLLTGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKYSNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERNGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDQDFISIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVERGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDPAEGEEALVSKFKKLHDDLTNGFWALEDESR | 624 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 43504935 | 43516165 | - | Bda015592.1 | Bda10g00910 | 14798 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda10g00910 | 624 | SUPERFAMILY | C-terminal domain of alpha and beta subunits of F1 ATP synthase | 472 | 554 | - | - | |
Bda10g00910 | 624 | PANTHER | V-TYPE PROTON ATPASE CATALYTIC SUBUNIT A | 3 | 623 | - | - | |
Bda10g00910 | 624 | CDD | V_A-ATPase_A | 88 | 461 | - | - | |
Bda10g00910 | 624 | Gene3D | - | 91 | 458 | IPR027417 | - | |
Bda10g00910 | 624 | ProSitePatterns | ATP synthase alpha and beta subunits signature. | 450 | 459 | IPR020003 | GO:0005524 | |
Bda10g00910 | 624 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 203 | 463 | IPR027417 | - | |
Bda10g00910 | 624 | PANTHER | V-TYPE PROTON ATPASE CATALYTIC SUBUNIT A | 3 | 623 | IPR022878 | GO:0046034|GO:0046961 | |
Bda10g00910 | 624 | CDD | ATP-synt_V_A-type_alpha_C | 476 | 582 | - | - | |
Bda10g00910 | 624 | SUPERFAMILY | N-terminal domain of alpha and beta subunits of F1 ATP synthase | 18 | 89 | IPR036121 | GO:0046034|GO:1902600 | |
Bda10g00910 | 624 | Hamap | V-type ATP synthase alpha chain [atpA]. | 19 | 623 | IPR022878 | GO:0046034|GO:0046961 | |
Bda10g00910 | 624 | Pfam | ATPsynthase alpha/beta subunit N-term extension | 102 | 224 | IPR031686 | - | |
Bda10g00910 | 624 | Pfam | ATP synthase alpha/beta family, nucleotide-binding domain | 233 | 459 | IPR000194 | GO:0005524 | |
Bda10g00910 | 624 | Gene3D | - | 134 | 206 | - | - | |
Bda10g00910 | 624 | Gene3D | - | 20 | 89 | IPR023366 | - | |
Bda10g00910 | 624 | CDD | ATP-synt_V_A-type_alpha_N | 21 | 87 | - | - | |
Bda10g00910 | 624 | TIGRFAM | V-ATPase_V1_A: V-type ATPase, A subunit | 20 | 612 | IPR005725 | GO:0033180|GO:0046961|GO:1902600 | |
Bda10g00910 | 624 | Gene3D | - | 460 | 609 | IPR024034 | - | |
Bda10g00910 | 624 | Pfam | ATP synthase alpha/beta family, beta-barrel domain | 25 | 85 | IPR004100 | GO:0046034|GO:1902600 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda10g00910 | Bda-Chr10:43504935 | Bda11g00156 | Bda-Chr11:2049691 | 2.69E-27 | dispersed | |
Bda10g00910 | Bda-Chr10:43504935 | Bda04g00964 | Bda-Chr4:59307377 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda10g00910 | K02145 | - | dcr:108209232 | 1194.87 |