Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda10g00917 ATGAAATCCTTCTCTCTACAACTGGAGAAGATGACCCAGGATCTTTTCCTCACATTCCACTGCTATTGTACTCGTAAGGATATACATTGTCTTGACATCATCCTTGAAGACACCGACATTGTAAAAGCTTTGACAGAATATGTTTCCTACGCTGCAATCGAGAATTTAGTTCTCGGAGCTCCTGCAAAACATGGATTTATTCGATTCAGAACATCAAACATACCTAGCAGCGTCTCAAAAATGGCTCCCGATTTCTGTACTGTTTATGTTGTCTCAAAAGGAAAAGTCTCCAACGTGCGGAACGCTTCTCGCACATCCCCATTTTCTTCTCCGCTGCAAGATCACATCCGAGATAGAGACAAACAGAAAACCTCCAGCTCACCTGGACACACGATGAATTTAAGAGGTTTCTTTTGCAGTAGCAGCAGCTTCATTAGCATTTCCTTTGAAACATTATTACAGTCGCCGGTTACCCGAGGGAGAGGGTGGAATGCAAAGACTGGCGGCGGATTCTCTGAATCAGACTCTGACATATCATTCATAAGCTCTGATAGAGCAAGCACAGATTGTGGTTCCTCTTTGTTCTATGACTATGTTGATTCTGGTAGAACATCAAGGCTTTCAACCAGCTCAGATCAGAGCCTCGGTTCCGCCTGTCAAGCACCGAGATGGACGGAACTCAATGCTATGAACGAATTTTCTTCACTTTCGCAAGAGAGCAACAGGACATCATGCTCCTGGTCATCACAGAATTTGGAGGAAGTGGACAGTGAGATGAGAAGGTTGAAGCTAGAGCTGAAGCAGACAATGGAGATGTACAGTACAGCATGCAAAGAAGCACTCACAGCAAAGCAGAAGGCAGTTGAGCTACACAGCTGGAGACTTGAAGAAGAGCGAAAGTTAGAGAGGGCACGGCTCGCACAGGAGGCTGCATTGGCAATTGCAGACAAGGAGAGAGTGAGATGCCAGGCAGCAATGGAAGCAGCTGATGCAGCAAAGAAAATAGCAGAGTTAGAATCACAAAAAAGAGCAAATTTGGAGCTGAAAGCCCTCAAAGAAACGGAGGAATTCCGAAAAGCGTCAGAAAATTTAGCTCAGTATAATTTGATGTGCAGGAAATATAGTATTGAGGAGATTGAATTAGCAACTGAAGCTTTTGCTGAATCTCGGAAAATTGGGGAAGGGGGTTATGGACCTGTCTACAAGTGCTACCTTGATCACACTCCGGTTGCCGTCAAGGTTTTACGGCAAGATGCTTCACAAGGAAGATTACAATTTCAGCAAGAGATTGATTTTCTAACCTTGTCTTGGCCTGAGCAGATTGACATTCTAAGTCGCATTCGGCATCCTAACATGGTACTTCTCCTTGGAGCTTGCCCAGAGTATAGCATTCTAGTCTATGAGTACATGGCGAATGGAAGTCTAGATGACCGCCTCTTCCAGAGAGGGAACACCCCAGTTCTATCCTGGCAACTAAGATTTCGGATTGCAGCAGATATTGCCACTGGCCTGCTTTTTCTTCACCAAACCAAGCCAGAGCCATTAGTGCATCGAGACCTTAAACCTGGAAATATTTTGCTGGACCACAACTACGTCAGCAAGATCAGCGATGTTGGATTGGCCAGGCTTGTCCCTGCTGTTGCTGAAAATATAACACAGTACTGCATGACATCAACGGCCGGAACTTTTTGTTACATCGATCCAGAATATCAACAAACTGGAATGCTAGGTGTGAAATCTGACGTGTATTCCTTGGGGATCATGCTTCTGCAGATACTGACAGGCAAGCCACCAATGGGCTTGGCTCACTACGTTGGTCGATCGATTGAGAAAGGCACTTTCACTGAAATGCTTGACAAAGCAGTGCCTGATTGGCCAGTTGAAGAGGCTCTATGTTTTGCAAAGCTAGCACTCCAGTGTGCAGAACTCAGACGAAAAGACAGGCCGGAGCTTGGCGAGACTGTGCTTCCGGAGCTGAATAAGTTGAGAGAATTTGCTGAGGAAAAGGACAACCTTTTAGAAGGAAGTCATGGACCTTATTGCCTGCATGTTTCCTCGCATCAAGTAAGTGAGAGAGACAGACCAAACTACTAG 2094 45.37 MKSFSLQLEKMTQDLFLTFHCYCTRKDIHCLDIILEDTDIVKALTEYVSYAAIENLVLGAPAKHGFIRFRTSNIPSSVSKMAPDFCTVYVVSKGKVSNVRNASRTSPFSSPLQDHIRDRDKQKTSSSPGHTMNLRGFFCSSSSFISISFETLLQSPVTRGRGWNAKTGGGFSESDSDISFISSDRASTDCGSSLFYDYVDSGRTSRLSTSSDQSLGSACQAPRWTELNAMNEFSSLSQESNRTSCSWSSQNLEEVDSEMRRLKLELKQTMEMYSTACKEALTAKQKAVELHSWRLEEERKLERARLAQEAALAIADKERVRCQAAMEAADAAKKIAELESQKRANLELKALKETEEFRKASENLAQYNLMCRKYSIEEIELATEAFAESRKIGEGGYGPVYKCYLDHTPVAVKVLRQDASQGRLQFQQEIDFLTLSWPEQIDILSRIRHPNMVLLLGACPEYSILVYEYMANGSLDDRLFQRGNTPVLSWQLRFRIAADIATGLLFLHQTKPEPLVHRDLKPGNILLDHNYVSKISDVGLARLVPAVAENITQYCMTSTAGTFCYIDPEYQQTGMLGVKSDVYSLGIMLLQILTGKPPMGLAHYVGRSIEKGTFTEMLDKAVPDWPVEEALCFAKLALQCAELRRKDRPELGETVLPELNKLREFAEEKDNLLEGSHGPYCLHVSSHQVSERDRPNY 697
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 43563018 43565951 - Bda015599.1 Bda10g00917 14805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda10g00917 697 Coils Coil 252 272 - -
Bda10g00917 697 CDD STK_N 7 94 - -
Bda10g00917 697 MobiDBLite consensus disorder prediction 101 129 - -
Bda10g00917 697 SUPERFAMILY Protein kinase-like (PK-like) 364 654 IPR011009 -
Bda10g00917 697 ProSiteProfiles Protein kinase domain profile. 386 666 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda10g00917 697 SMART serkin_6 386 656 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda10g00917 697 Coils Coil 343 363 - -
Bda10g00917 697 PANTHER OS02G0152300 PROTEIN 6 683 - -
Bda10g00917 697 ProSitePatterns Serine/Threonine protein kinases active-site signature. 515 527 IPR008271 GO:0004672|GO:0006468
Bda10g00917 697 Pfam Protein kinase domain 387 648 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda10g00917 697 Gene3D Phosphorylase Kinase; domain 1 362 469 - -
Bda10g00917 697 Gene3D Transferase(Phosphotransferase) domain 1 470 676 - -
Bda10g00917 697 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 6 683 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda10g00917 Bda-Chr10:43563018 Bda11g00887 Bda-Chr11:8708552 0 dispersed
Bda10g00917 Bda-Chr10:43563018 Bda13g01593 Bda-Chr13:39499540 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69876 PF00069 Pkinase 1.60E-37 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda10g00917 - - csv:101202855 895.19