Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda10g00922 ATGGAGCTGAGATCCCAGTCGGTGGCGGTGGCGGTGGCCTTAGTGTTTGCCTGCCAGTGTTGTTGGGCCGGCGTTTCCGATGGATCTGAGACCGCTTCTTTTCCTCTTCCGCTCATAACGACGGAGCACCATGATGAAGCTTTGCTTTCTTTCCTGGACAGCATACCCTCCTCCAGTCCCTTGATGGTCCCCCTCACTCTCATTCCCCGAGCTGCTTCTACTGGAGCTGTCTGTTTGGATGGAACACTACCTGGTTATCATTTCCATCCTGGCTATGGATCTGGTGGAAATAGCTGGCTAATTCAATTGGAGGGAGGAGGTTGGTGTAATACAATCAGGAACTGCATATTTCGCAAAACTACTCGCCGTGGTTCTTCTAAATATATGGAAAAGGAATTACCCTTCACAGGAATACTGAGCAATAAAGCTGAGGAAAATCCTGACTTCTTCAACTGGAACAGAGTGAAGTTGCGATATTGTGACGGAGCATCTTTCAGTGGGGACAGTTACAATGAGGCAGCACAGCTTAATTTTCGAGGACAGCGAATATGGTTGGCTGCCATTGAAGAGTTAATGTCAAAGGGAATGCACAACGCCAAGCAGGCCCTGCTTGCTGGATGCTCTGCCGGAGGTCTTGCTGCAATATTGCATTGTGATGAGTTTCGAGCCTTCTTTCCCAAGACTACAAAAGTGAAATGTCTAAGTGATGCAGGATTGTTCCTCGATGCAATTGATGTTTCCGGAGGGCGAACGTTGAGGAATTTATTTGGCGGGGTCGTCAGCTTACAAGGAGTTGGAAGGAATCTGCCAAGTGCTTGTACTAACCACTTGGATCCAACATTGTGCTTCTTCCCTCAAAATGTTATAGCAGAAGTTAAGACCCCACTGTTTCTTCTTAATGCAGCGTATGATGCATGGCAGCTCCAGGCAAGTTTAGCTCCACGGTCGGCCGATCCTCGTGGATCTTGGGTTGGATGCAAATTGAACCATGCCCATTGCAATTCATCTCAGATACAGTTTCTCCAAGACTTCAGGTCTCAGATGCTCAGCGCGGCTAGAAACTTCTTGTTGCCCAATCGAAATGGCGCGTTCATAAATTCTTGTTTTGCTCATTGCCAGTCAGAACGGCAGGATACGTGGTTTGCCGATGACTCTCCTCTCATTCAAAACAAGGCAATTGCACTATCTATCGGGGATTGGTTCTTCGACCGAGCTAGCATTAAAGAAATAGACTGCGCCTACCCGTGCGACAATACGTGCCATAACCTTGTTTTCAACTGA 1281 47.78 MELRSQSVAVAVALVFACQCCWAGVSDGSETASFPLPLITTEHHDEALLSFLDSIPSSSPLMVPLTLIPRAASTGAVCLDGTLPGYHFHPGYGSGGNSWLIQLEGGGWCNTIRNCIFRKTTRRGSSKYMEKELPFTGILSNKAEENPDFFNWNRVKLRYCDGASFSGDSYNEAAQLNFRGQRIWLAAIEELMSKGMHNAKQALLAGCSAGGLAAILHCDEFRAFFPKTTKVKCLSDAGLFLDAIDVSGGRTLRNLFGGVVSLQGVGRNLPSACTNHLDPTLCFFPQNVIAEVKTPLFLLNAAYDAWQLQASLAPRSADPRGSWVGCKLNHAHCNSSQIQFLQDFRSQMLSAARNFLLPNRNGAFINSCFAHCQSERQDTWFADDSPLIQNKAIALSIGDWFFDRASIKEIDCAYPCDNTCHNLVFN 426
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 43630166 43633133 + Bda015604.1 Bda10g00922 14810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda10g00922 426 PANTHER PECTIN ACETYLESTERASE 2 61 425 - -
Bda10g00922 426 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 18 - -
Bda10g00922 426 PANTHER NOTUM-RELATED 61 425 IPR004963 GO:0016787
Bda10g00922 426 Pfam Pectinacetylesterase 59 405 IPR004963 GO:0016787
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g01615 Bda-Chr1:52068097 Bda10g00922 Bda-Chr10:43630166 0 dispersed
Bda08g00443 Bda-Chr8:4535050 Bda10g00922 Bda-Chr10:43630166 3.65E-155 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda10g00922 K19882 - qsu:112025058 654.44