Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda10g00939 ATGGACGGAGCTGGTGGAGGGCTTGCTCAGCTGGAGGACACCGATATGTCTGAGGCGGCGCCTCCCGCGCAATCGCTCCCTGATCCTCAACCGCAGGTGGCGATTGGCATGGAGAACATTCCCGCCACTCTTACCCATGGCGGAAGGTTTATTCAGTACAATATATTTGGTAATTTCTTCGAAGTTACCGCTAAGTACAAGCCTCCTATCATGCCTATCGGCAAGGGCGCTTATGGAATCGTCTGCTCGGCTTTGAACTCGGAGACTAACGAGCATGTGGCGATTAAAAAGATTGGGAATGCTTTTGATAACAAGATCGATGCCAAGAGAACTCTACGAGAGATCAAGCTTCTCCGTCATATGGATCATGAAAACGTTGTTGCAATTAGGGATATTATACCTCCTCCTCAGAGGGACACATTTAATGATGTGTACATAGCGTACGAGCTAATGGACACTGACTTGCATCAAATTATTCGTTCTAATCAAGGATTAACAGAGGAACACTGCCAGTACTTTCTGTATCAAATTCTTCGAGGATTGAAATACATACATTCTGCAAATGTGCTGCATAGAGATTTAAAACCTTCCAACTTGCTGTTGAATGCCAACTGTGACTTAAAAATATGTGATTTTGGACTTGCTCGTGTTACATCAGAAACTGATTTTATGACGGAGTATGTTGTCACAAGATGGTATCGAGCTCCGGAGCTGTTATTAAACTCTTCAGATTACACTGCAGCTATCGATGTGTGGTCAGTTGGATGTATTTTCATGGAACTTATGGATCGGAAGCCATTGTTTCCTGGTAGAGATCACGTGCATCAGCTGCGACTGCTTATGGAGCTGATAGGTACACCATCCGAGGCAAACCTCGGTTTTTTAAACGAAAATGCCAAGAGATACATCCGGCAACTTCCTCTGTACCGTAGACAATCATTTCCCCATGTTCATCCTTCAGCTATTGATCTTGTTGAAAAGATGTTAACATTTGATCCAAGACAAAGGATTACTGTCGAAGACGCACTGGGTCACCCCTATTTAAATTCACTGCACCTGAGTGAGGAACAGATGAAGGAACTGATCTATCGAGAGGCCCTTGCATTCAACCCTGAGTATCATCATCTGGGATGA 1134 44.36 MDGAGGGLAQLEDTDMSEAAPPAQSLPDPQPQVAIGMENIPATLTHGGRFIQYNIFGNFFEVTAKYKPPIMPIGKGAYGIVCSALNSETNEHVAIKKIGNAFDNKIDAKRTLREIKLLRHMDHENVVAIRDIIPPPQRDTFNDVYIAYELMDTDLHQIIRSNQGLTEEHCQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARVTSETDFMTEYVVTRWYRAPELLLNSSDYTAAIDVWSVGCIFMELMDRKPLFPGRDHVHQLRLLMELIGTPSEANLGFLNENAKRYIRQLPLYRRQSFPHVHPSAIDLVEKMLTFDPRQRITVEDALGHPYLNSLHLSEEQMKELIYREALAFNPEYHHLG 377
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 43740442 43743380 - Bda015619.1 Bda10g00939 14827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda10g00939 377 Pfam Protein kinase domain 72 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda10g00939 377 ProSiteProfiles Protein kinase domain profile. 67 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda10g00939 377 Gene3D Phosphorylase Kinase; domain 1 50 150 - -
Bda10g00939 377 SUPERFAMILY Protein kinase-like (PK-like) 72 353 IPR011009 -
Bda10g00939 377 ProSitePatterns MAP kinase signature. 102 205 IPR003527 GO:0004707|GO:0005524|GO:0006468
Bda10g00939 377 SMART serkin_6 67 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda10g00939 377 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 32 352 - -
Bda10g00939 377 Gene3D Transferase(Phosphotransferase) domain 1 151 357 - -
Bda10g00939 377 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 32 352 - -
Bda10g00939 377 ProSitePatterns Protein kinases ATP-binding region signature. 73 97 IPR017441 GO:0005524
Bda10g00939 377 ProSitePatterns Serine/Threonine protein kinases active-site signature. 189 201 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda10g00939 Bda-Chr10:43740442 Bda11g01853 Bda-Chr11:53680783 8.21E-137 dispersed
Bda07g00491 Bda-Chr7:6143985 Bda10g00939 Bda-Chr10:43740442 0 transposed
Bda07g00616 Bda-Chr7:7528787 Bda10g00939 Bda-Chr10:43740442 0 transposed
Bda11g00256 Bda-Chr11:2978852 Bda10g00939 Bda-Chr10:43740442 2.91E-179 transposed
Bda10g00939 Bda-Chr10:43740442 Bda07g01675 Bda-Chr7:31090988 1.46E-44 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69877 PF00069 Pkinase 5.30E-73 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda10g00939 K14512 - mnt:21403278 674.085