Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda10g00944 ATGGGAACCTACCTGCAAATTCCGGCAGAAGCGGACGACCAACACATATTCCGTAGCCATTTTCCGGCCGTTCAAGTTCCGGAAAACATCACGCTGCCGGAATTCGTGCTCCAAGATGCCGAATTATATGCAAACAAGGTCGCGTTAGTGGAGGCTTTAACGGGGAAGGAGATTACGTATGGAGAAGTTGTTCGAGACACGAAGAGGCTTTCAAAGGCCTTGAGATCTTTGGGTTTGAGAAAGGGTCAAGTTGTTATAGTTTTACTCCCAAATGTTGCAGAATACCCCATTGTTGTTCTTGGAATAATGAGCTCCGGCGGAGTGTTTTCCGGTGCAAACCCTTCTGCTCACTCTTCTGAAATCAAAAAGCAAGTTGAGGTTGCAGAGGCAAAACTTATTATCACCAATGGCTCAAACTATGAAAAGGTTAAGGGTCTTGATCTTCCAGTCATCGTACTCGGCGAAGAACCGATCGAAGAGGCGATGAATTGGGACAAGCTGCTAGAGGCAGCAGATCGAGCCGGGACCGAAATAAGCTCGGTCGAATCCATACAACAGACCGATCTATGTGCATTGCCATTCTCATCAGGCACAACAGGAGTATCAAAGGGTGTAATGCTAAGTCATAGAAATCTGGTGGCTAATCTCTGCTCCACACTGTTTAACGTGCCGAAAGAAATGGTGGGTCAAGTCACGACGCTTGGTTTAATCCCATTATTTCACATTTATGGGATTACTGGAATTTGCTGTGCTACGCTTCGAAACAAGGGGAAAGTGGTGGTGATGGGAAGATTTGAGCTGAGAATGTTTCTCAACGCATTGATCACTCAGGAGGTCACTTTTGCTCCGATCGTGCCGCCGATTATCCTGGCTTTGGTCAAGAATCCAATTGTGGAGGAGTTTGATCTTACCAAGCTCAAACTCCAGGCCATTATGACCGCCGCTGCTCCCCTCGCACCGGAGCTTCTCTCGGCGTTTGAGAAAAAATTTCCCGGCGTCGACGTTCAGGAGGCGTATGGATTGACAGAGCACAGCTGCATCACGCTCAACTATGGCGGCATTGAAAGAGACAATGGCAAATTGAAGAAGAACACAGTGGGTCAAATTCTTCCCAATTTACTCGTCAAATTCATTGACCCTGAAACTGGTAGATCCTTACCCAAGAACACTCATGGTGAAATCTGCGTCAAAAGCCAGTGTGTGATGAAAGGGTATTTCAGAAACGAGGAGGAGACTTGCCGGACCATCAAGAATGGGTGGCTCCACACCGGCGACATTGGCTACATTGATGACGACGGGGATGTGTTCATCGTGGATCGCATCAAGGAATTAATCAAATACAAAGGCTTTCAAGTAGCTCCGGCCGAACTAGAAGCAATCTTACTCACTCACCCCTCCATTGAAGACGCAGCCGTAGTGCCGTAA 1425 47.51 MGTYLQIPAEADDQHIFRSHFPAVQVPENITLPEFVLQDAELYANKVALVEALTGKEITYGEVVRDTKRLSKALRSLGLRKGQVVIVLLPNVAEYPIVVLGIMSSGGVFSGANPSAHSSEIKKQVEVAEAKLIITNGSNYEKVKGLDLPVIVLGEEPIEEAMNWDKLLEAADRAGTEISSVESIQQTDLCALPFSSGTTGVSKGVMLSHRNLVANLCSTLFNVPKEMVGQVTTLGLIPLFHIYGITGICCATLRNKGKVVVMGRFELRMFLNALITQEVTFAPIVPPIILALVKNPIVEEFDLTKLKLQAIMTAAAPLAPELLSAFEKKFPGVDVQEAYGLTEHSCITLNYGGIERDNGKLKKNTVGQILPNLLVKFIDPETGRSLPKNTHGEICVKSQCVMKGYFRNEEETCRTIKNGWLHTGDIGYIDDDGDVFIVDRIKELIKYKGFQVAPAELEAILLTHPSIEDAAVVP 474
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 43762481 43764202 + Bda015624.1 Bda10g00944 14832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda10g00944 474 PANTHER 4-COUMARATE--COA LIGASE-LIKE 1 9 474 - -
Bda10g00944 474 ProSitePatterns Putative AMP-binding domain signature. 192 203 IPR020845 -
Bda10g00944 474 Gene3D - 443 474 IPR045851 -
Bda10g00944 474 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 9 474 - -
Bda10g00944 474 SUPERFAMILY Acetyl-CoA synthetase-like 15 474 - -
Bda10g00944 474 Gene3D - 14 442 IPR042099 -
Bda10g00944 474 Pfam AMP-binding enzyme 39 447 IPR000873 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda10g00944 Bda-Chr10:43762481 Bda03g01354 Bda-Chr3:49076453 1.61E-110 dispersed
Bda10g00944 Bda-Chr10:43762481 Bda03g01352 Bda-Chr3:48786072 6.54E-111 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda10g00944 K01904 - qsu:112038127 731.095