Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda10g00956 ATGATGAACAATGGAAGATCCGTGGAAGTAGAAAACCCTAGCGGAAAATTAACGCAGTATCAGAGACGGCGAGATTTTCCGATTGATTCAAAGAAATACTGCTACACCTTAAGCACGAAGGAACGAAGGCGATATTTAGTTAGGGCAACGTTTCAATACGGAAGTCTGGAAGAAGAAGACACATTGCCGAAATTCAAGCTTTATTTAGACACAACTAAATGGTCAACAGTAGCAATCGGAGACAGTTCAAGAGTATACGTGAAGGAAATGGTTATCAGAGCTCCTTCGACCTCCATTGATGTGTGCTTATGCTGTGCAATAACTGGTTCTCCATTTATATCCACTCTCGAGCTTCGCCCTTTTAATCTTTCAATGTACGCGACAGACTTCGAGGACAGGTTTTATCTCCAAGTAGCTGCTAGAGTAAACTTTGGAGCTTTAAGCAAGAACCCCATAAGATACCCAGATGACCCTTATGACAGAATATGGGATTCTGATCTTGACAGAAGGCAGAATTTTCTTGTTGGGGCTGCCTCTGGAACAGAGAGAATCAGTACATCTAAGAACATAGACATAAGAACAAGAGAGTTTCCACCAGTTAAAGTAATGCAAACTGCAGTATTGGGGACAGAGGGGGTCCTCAGTTACAGATTAAACCTAGAAAATTTCCCGGCAAATGCTCGAGCATACGCTTATTTTGCCGAAATTGAGGACATTAGTCCTAACGAGACTCGAAAGTTTAAACTACAACAACCTTATTTTCAAGATTATAGCAATGCTGTGGTGAATATTGCAGAGAATGCTAATGGAACCTACACTCTTTATGAACCGAGTTACATGAACGTGTCGTTAGATTTTGTTCTTTCTTTTGCCTTTGTTAAAACGAGAGACTCTTCTCTGGGGCCATTGTTGAACGCAATTGAAATAAGCCGATATGTGGAAATTTCGCCCAAGACTGACTCGAAGGATTTGATTGCCAGCCGTTCCCTTCGAGCGATGTTGGACGATGATGTTTCAACGAATGAAGGGGATCCTTGTGCTCCAACCCCCTGGGAATGGGTGACTTGCAGCTCTACTTTACCTCTCAGAATTGTTAAAATTGAGCTTTCAGGTAAAAGTGCCAAGGGCGAAATCCCATCTGAGATCAACAACATGGATGCCTTGACAGAGTTATGGATCGATGGAAACTCCCTCACGGGACAGCTTCCTGACATGAGCAAACTCGTAAATTTAAGGGTTTTGCATTTGGAGAACAACAATATGACGGGTCCTCTATCTTCTTACCTGGGCAGTTTACCAGACTTACAAGAACTGTACATTCAGAACAATTCTTTTTATGGGGAGATACCTCCAGATTTGTTGAGGAAGAAACTCATCTTCAAGTACATTCAGAACAATTCTTTTTATGGGGAGATACCTCCAGATTTGTTGAGGAAGAAACTCATCTTCAATTATCAAGGTAATCTACGGCTACACAAGGGAACACGAAGCAAGATGAATTCCAAGCTCTTTCTTGGAACACTAGCCGGAGTTCTTGCTGTTTTATCATTCTTGTTAGTGCTGAGTTTTATAGAATTTCAATGTGTTCTGTCTGTTCCAGGTGATTCTCTTCGAACCAGCACAAAGCCTTCTATCGCATATTCGATTTCTCGAGGCGACGAAGGCATAGCGTATTATATTACATTGTCCGAGCTTGAAGAAGCAACTGATAACTATTCAAAGAAAATAGGGAAAGGGAGCTTTGGGTCTGTATATTATGGAAAAATGAAAGATGGAAAAGAGGTGGCTGTCAAGATTATGTCGGATTCATCCATCCATGGGAATAAGCAGTTCATGACTGAGGTAGCTCTCTTGTCGAGGATTCATCACAGGAATTTAGTTCCTTTAATTGGGTACTGCGAGGAAGAACAGCAATCCATTCTGGTTTATGAATATATGCACAATGGAACACTGCGAGATCATCTAAGCGGTAGTGGAAGCTGTAAGTTCATGGACTGGCTAACTCGGCTTCGCATTGCAGAAGATGCAGCGAAAGGTCTTGAATACTTGCATACCGGTTGTAACCCTGGAATCATACATCGAGACGTAAAAACCAGCAATATTCTCTTAGACATCAATATGAGAGCCAAAGTTTCTGATTTTGGACTTTCGAGGCAGGCCGAGGATGATCTGACTCATGTTTCTAGTGTGGCAAGAGGAACTGTCGGCTACCTGGATCCCGAGTACTATGCTTGTCAGCAATTGACTGAGAAAAGCGATGTCTACAGTTTCGGAGTTGTTCTGCTAGAGCTGATTTCTGGAAAAAAACCCATCTCGGCCGATGATTACGGCACTGATATGAACATCGTTCACTGGGCGAGATCTTTAGTCAGGAAAGGGGACGTGATAAGCATCGTCGATCCATTTTTAATCGGGAACGTGAAAATCGAATCGATATGGAGGATTGCGGAGGTTGCGATTCAATGCGTCGAACAAACTGGAGTTTCCCGGCCGAGGATGCAGGAGATAATCTTGGCAATTCAAGATGCTATCAAGATAGAGCGGGGGAACCAAGCGGGCGGCAGCAGCAACTTATCTTCTGGAAGTTCAAACAAAGCTCAGTTGTCGAGGAAAACTCTGCTAACAACCTTTCTCGAGATCGAGAGCCCGGACTTATCGAACGGCGGCCTTCTTCCCCGGGCAAGGTAG 2688 43.19 MMNNGRSVEVENPSGKLTQYQRRRDFPIDSKKYCYTLSTKERRRYLVRATFQYGSLEEEDTLPKFKLYLDTTKWSTVAIGDSSRVYVKEMVIRAPSTSIDVCLCCAITGSPFISTLELRPFNLSMYATDFEDRFYLQVAARVNFGALSKNPIRYPDDPYDRIWDSDLDRRQNFLVGAASGTERISTSKNIDIRTREFPPVKVMQTAVLGTEGVLSYRLNLENFPANARAYAYFAEIEDISPNETRKFKLQQPYFQDYSNAVVNIAENANGTYTLYEPSYMNVSLDFVLSFAFVKTRDSSLGPLLNAIEISRYVEISPKTDSKDLIASRSLRAMLDDDVSTNEGDPCAPTPWEWVTCSSTLPLRIVKIELSGKSAKGEIPSEINNMDALTELWIDGNSLTGQLPDMSKLVNLRVLHLENNNMTGPLSSYLGSLPDLQELYIQNNSFYGEIPPDLLRKKLIFKYIQNNSFYGEIPPDLLRKKLIFNYQGNLRLHKGTRSKMNSKLFLGTLAGVLAVLSFLLVLSFIEFQCVLSVPGDSLRTSTKPSIAYSISRGDEGIAYYITLSELEEATDNYSKKIGKGSFGSVYYGKMKDGKEVAVKIMSDSSIHGNKQFMTEVALLSRIHHRNLVPLIGYCEEEQQSILVYEYMHNGTLRDHLSGSGSCKFMDWLTRLRIAEDAAKGLEYLHTGCNPGIIHRDVKTSNILLDINMRAKVSDFGLSRQAEDDLTHVSSVARGTVGYLDPEYYACQQLTEKSDVYSFGVVLLELISGKKPISADDYGTDMNIVHWARSLVRKGDVISIVDPFLIGNVKIESIWRIAEVAIQCVEQTGVSRPRMQEIILAIQDAIKIERGNQAGGSSNLSSGSSNKAQLSRKTLLTTFLEIESPDLSNGGLLPRAR 895
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 43874893 43879913 - Bda015637.2 Bda10g00956 14844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda10g00956 895 ProSitePatterns Protein kinases ATP-binding region signature. 576 598 IPR017441 GO:0005524
Bda10g00956 895 Pfam Protein tyrosine and serine/threonine kinase 573 836 IPR001245 GO:0004672|GO:0006468
Bda10g00956 895 SUPERFAMILY L domain-like 343 478 - -
Bda10g00956 895 PANTHER - 5 453 - -
Bda10g00956 895 PANTHER - 462 862 - -
Bda10g00956 895 SMART serkin_6 570 844 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda10g00956 895 Pfam Malectin-like domain 3 310 IPR024788 -
Bda10g00956 895 PANTHER OS07G0107800 PROTEIN-RELATED 5 453 - -
Bda10g00956 895 PANTHER OS07G0107800 PROTEIN-RELATED 462 862 - -
Bda10g00956 895 ProSiteProfiles Protein kinase domain profile. 570 844 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda10g00956 895 SUPERFAMILY Protein kinase-like (PK-like) 553 837 IPR011009 -
Bda10g00956 895 ProSitePatterns Serine/Threonine protein kinases active-site signature. 691 703 IPR008271 GO:0004672|GO:0006468
Bda10g00956 895 Gene3D Transferase(Phosphotransferase) domain 1 646 857 - -
Bda10g00956 895 Gene3D Phosphorylase Kinase; domain 1 552 645 - -
Bda10g00956 895 Gene3D Ribonuclease Inhibitor 322 499 IPR032675 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda05g01245 Bda-Chr5:60314525 Bda10g00956 Bda-Chr10:43874893 0 dispersed
Bda10g00956 Bda-Chr10:43874893 Bda14g01313 Bda-Chr14:14613964 4.48E-128 dispersed
Bda14g00519 Bda-Chr14:3753467 Bda10g00956 Bda-Chr10:43874893 1.01E-43 dispersed
Bda10g00956 Bda-Chr10:43874893 Bda03g01735 Bda-Chr3:56779740 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69878 PF12819 Malectin_like 5.70E-76 CL0202 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda10g00956 - - mcha:111019775 1328.92