Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda10g00962 ATGGAAGAGGAAATCAAAAATGAATTCGAGAGAAGTGGTTTCCAGCTCGACGACTCAGAAGAAATTCTAAAAAAATGTCAGTACAAATTTGCCTTTTCCCTAAATCTTCTCTGTGCATGTGTTAAGATGGCGAGTTTTGAGTTTCATCGTGTTTTGATATTAGGTGTCACAATGTGCATCAATTACAATCTCAAACCCTCCGATATCATTTCCAGCTGGGAGGTATACTATCTCAACAGACAATTGGACGGATCAATTGTAGAGAATGTACAGATGGATGGGTTTTTACAACATTTACAAAACGAAAGAGTTGAAACAGTTATTAAAGAGGAGTCAGATTTGCATATTTACTCCAGTAAAGATGTGGACATGATTTTGAATAATGAAGTTGATGATTCAATAGAAGAGACTCTTGGAACTCCAAAAGCCAGATCTCCAAACCGAGATCCCGAGTCATTTAGTAACACACCTCACACGAATGGAAACATATTTTCTTCTGGGAAATCATTGAATCATATAACCCCCTTTGGGCGGCGAACAGAAAAGTTTGTTGTCAAATTAAGCGTCAATGGTATGTCTGATATGGATATAGATAAAAAGGAAGACGGCCAAGGACATAGTGAGGGCGACGTCATTAGAAAGATTAAACCCTCCACAAGGTGTTCTTTGTTTGTCCATGATTCAGGTCCAGAACCACATTTGAGATTCATGTATGACAAGATTGAAAATAGGTTTAATGCTCTCGAAAATCGAATCAGAAAGCATACATCTGCATTTGTTGCATGTGGACGGTACGAGGAACCCATGGATCCTACTGTTGCATCAGAGAAAAGCATGTTCACCGTTGGGATGATTTGTTGTGATGGAGAGGGCCATTTAAATGATAAAGCCACTCTGTTACAGAGCAGTGTCGAGCATTCTGGAGGTCAACGTGTTCGTTTAGAATTACAAAAACTTGGCCAATTTTCGATATTTCCTGGCCAGGTAGTAGGTGTTGAAGGGCATAATCCCAGCGGACACTGCTTGATCGCATCAAAACTGGTTGATTCCATTCCTTCCCACATCACTGCTGATGTCAATTTTCCTCCCGCAAAGAAGCAAGCTTTGGATCACAAAATTCTTCCTATTGTTCAATCTGGAGATAAGACAGAATTGTTAGTGATTATTGCATCTGGCCCATTTACCACAACAGACAACTTAACGTTTGAGCCTTTGACAGAGCTATTAGCATATGCAAAAAGAAAGCTTCCGCAGCTGTTAGTACTGATGGGACCTTTTATTGATTCAGAACATCCAGATATTAAGAATGGAACAGTAGACCGAAGCTTTGACGAATTATTTAACATAGAAATTGTTGGAAGGTTGCAAGATTACGTAGAACACATGGGTCCTGACACACAGGTGCTTCTCATACCATCAGTAAGGGATGCTAATCATGATTTTGTTTTCCCACAGATTCATCTTCTCTATGATATTTTTGGTTCACAAAGTTGGGCATCTCACCAGGTGAAGGTAGGTTGCTCAACGGTGGATATCATTAGACACCTGAGTGGAGAAGAGATGTCAAGAAACCCAACAAAGGGCACATCTACGGATCGCATGGTTCGACTTGCCAATCATTTACTTCATCAACAAAGGCATGTTATTGTAATTTCTTCTTTCAAAAACAAAATTTTCTTTCTAGTGTTGAAAACATCTTATAGTTTTGAAATTTTGAACAGCTTCTATCCTCTATATCCACCAAACGAAGCCGTTCCTTTGGATTTTTCACTCGCCCCGGAATCTCTTCGCATCTCAGACATTCCAGACATTCTCATCCTTCCTTCAGATATGAAACATTTCATAAAGGTATTGTCTGTTGGAGAAGAGTTAGTGAAGCAATGCTTATGTGTGAATCCAGGGAGGCTAGCTAAGGGGGAAGGCGGTGGTACTTTTGCAGAGCTCCATTACTTTGGTAGTCCTGAAAAGACCAACGCTTCTATAATTGGTATCTAA 1995 39.85 MEEEIKNEFERSGFQLDDSEEILKKCQYKFAFSLNLLCACVKMASFEFHRVLILGVTMCINYNLKPSDIISSWEVYYLNRQLDGSIVENVQMDGFLQHLQNERVETVIKEESDLHIYSSKDVDMILNNEVDDSIEETLGTPKARSPNRDPESFSNTPHTNGNIFSSGKSLNHITPFGRRTEKFVVKLSVNGMSDMDIDKKEDGQGHSEGDVIRKIKPSTRCSLFVHDSGPEPHLRFMYDKIENRFNALENRIRKHTSAFVACGRYEEPMDPTVASEKSMFTVGMICCDGEGHLNDKATLLQSSVEHSGGQRVRLELQKLGQFSIFPGQVVGVEGHNPSGHCLIASKLVDSIPSHITADVNFPPAKKQALDHKILPIVQSGDKTELLVIIASGPFTTTDNLTFEPLTELLAYAKRKLPQLLVLMGPFIDSEHPDIKNGTVDRSFDELFNIEIVGRLQDYVEHMGPDTQVLLIPSVRDANHDFVFPQIHLLYDIFGSQSWASHQVKVGCSTVDIIRHLSGEEMSRNPTKGTSTDRMVRLANHLLHQQRHVIVISSFKNKIFFLVLKTSYSFEILNSFYPLYPPNEAVPLDFSLAPESLRISDIPDILILPSDMKHFIKVLSVGEELVKQCLCVNPGRLAKGEGGGTFAELHYFGSPEKTNASIIGI 664
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 43911087 43915544 + Bda015644.2 Bda10g00962 14850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda10g00962 664 Coils Coil 238 258 - -
Bda10g00962 664 MobiDBLite consensus disorder prediction 138 166 - -
Bda10g00962 664 MobiDBLite consensus disorder prediction 147 166 - -
Bda10g00962 664 PIRSF DNA_pol_alpha_2 43 547 IPR016722 -
Bda10g00962 664 PIRSF DNA_pol_alpha_2 572 661 IPR016722 -
Bda10g00962 664 PIRSF DNA_pol_alpha_2 1 52 IPR016722 -
Bda10g00962 664 Pfam DNA polymerase alpha/epsilon subunit B 387 546 IPR007185 GO:0003677|GO:0006260
Bda10g00962 664 Gene3D - 370 661 - -
Bda10g00962 664 PANTHER DNA POLYMERASE 2 ALPHA 70 KDA SUBUNIT 574 664 IPR016722 -
Bda10g00962 664 PANTHER DNA POLYMERASE 2 ALPHA 70 KDA SUBUNIT 56 546 IPR016722 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda10g00962 K02321 - jre:109019513 818.15