Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda10g01006 ATGGCTGTGATTAAGCCGTGGCGTCCTAGCTTTCTCTTTCTAGTCTTAGTTTTCGTCGTTGAATTTTTCCCTCTCGTTCTTTGCCAATCTAATTCCCCTCAAAATATTGAAACTTTCTATCCGACTCAGATTTCTCTCACTCCTCCGGCGATTTCTACACCTCCACCTCCGCCGGGAGCAGCTCCGTCACCTGGTTGGGCGAGGACCAGGACGATAGCGACGGCAGTAGTGGTTACTGCGGTTGGGACGCTGTTGATTTCTGCGCTGCTTTTCTTTTTGATCCACAAGCGTTCGCGGAGACGAAGAAAAGGAGAAGTAACTGTTTCTGGTTCTGGTTCAGATTCTAGGGCGTTGGGGGGTCAGAGGCAGCCGGTAATAATGGCGCAGAATGAGTTTACTAGATTGAGCGGAAATCTGAAGGGATTCATTGTGGATGAGAACGGACTGGATGTGATCTACTGGAGAAAACTCGAGAGTAGAAGGTCGAAGAACAGTCTGCGCAAGGACACGACTTTATTGGCGGTTTCTGAAAATAAAGGATCTGGTCCGTCTCCTCCTCCTCCGCCACCTCCTTTGATTTCTGCAAACAAAAATGCCGGACCACCACCTCCACCGCCACCTCCTTTGACTTCTGGGAACAAAAACGGCGGGCCACCACCTCCACCGCCCAATCCTTTATCTATGAAATCGGGTCCAAAACCGCCACCGCCCCCTGCAACGGTTGGGAAACCGGTTGAAGAACCGTCAACCTCGAATGCTGATCAGGTTAAACTGAAGCCATTGCATTGGGATAAGGTGATTACTAGAGATACATCTCATTCGATGGTGTGGGACAGAATCGATGGAGGTTCTTTCAGGTTTGATGGAGATTTAATGGAAGCTCTGTTCGGAACCGTCGCAACGAACAGAAAATCCCCTCGGCAAACGAGGGATCCAGCTGCTTCGACCGGTGGAGACTCCAAAGCACCAGCTAAGATCTTCATCCTCGATTCAAAAAAGTCTCAGAACACCGCGATTGTTATCAAGTCCATGTCAATTTCTCGTGACGAAATCGTCGACGCTCTCATGGACGGCCACGGCCTCGAGTCGGACGTTCTCGAAAAGCTCACAAAAATAGCTCCGAATCAAGAAGAACAATCTCACATACGGAATTTCGAAGGAGACTCGCTGAACTTAGCCGACGCAGAATCGTTCCTCTTCAAGCTTCTGAAAGATGTTCCATCCGCTTTTACTCGATTAGATACGATGCTTTTCCGATCAACTTACGATTCAGATATTCTTCATCTGAAAGAATATCTAGAATCCATTGAATCAGGTTGCAAAGAGCTTCGAACTCAGGGACTCTTCATGAAACTACTCGAAGCAGTTCTCAAAGCCGGAAATCGGATGAATGCAGGCACTTCAAGAGGCAATGCTCAGGCATTCAACCTGAGCGCTCTCCGGAAACTCTCCGACGTCAAAAGCACGGACGGAAAAACCAGTCTCCTCCACTTCGTCGTCGAAGAAGTAGTCAGATCGGAGGGGAAGAAATGCGTCTTGAACAAAAACAAGAGCTTCAGCCGGAGCAGTAGTAAAAGTAGCAGTAACAGCATAAACTCCGATAGTTCTACGTCGAAAGACGAAAGAATGAATGAATACACGACGCTCGGATTACCAATTGTCGGAGGCCTCAGCGCACAGTTCTCAAACGTAAAAAAAGCCGCCGCCATTGATTACAACACCTTCTTCGGAATATGCTCCGGACTCATATCCCGTACTTCCGAAATTCGACAGATTCTTCCTAAATGTGCCGGCGATGGAGGAACGTTCGTTAAAGAAACGGAGAATTTTCTTGAATCATCTGAAAAGGAACTGAAGAAGTTAAGGGAAGAGCAGACGAGAGTGATGGAGCTTGTGAAGACGACGACCGGATATTATCAGGCGGAAGGTTTCAAGGGCCAAGAAGTTCAACCTCTTCAAATATTTGTAATCGTAAAAGAATTCCTAGACATGGTCGATCAGGTCTGCGTCGGAATAGCTCGGAATCTGCAGAAAAAGAAGTCATCAATGGCGACCACCGGTTCTCCTTCAACAAAATCTCCGCCATTGAAGACCCAATTAAGGTTTCCCTTCCCCAACTTGGCTGCGCATTTCTTGTCAGACAAATCCCTATCCAGGAGCTCTTCTAGTGATGATTCAGATGATTAA 2187 47.55 MAVIKPWRPSFLFLVLVFVVEFFPLVLCQSNSPQNIETFYPTQISLTPPAISTPPPPPGAAPSPGWARTRTIATAVVVTAVGTLLISALLFFLIHKRSRRRRKGEVTVSGSGSDSRALGGQRQPVIMAQNEFTRLSGNLKGFIVDENGLDVIYWRKLESRRSKNSLRKDTTLLAVSENKGSGPSPPPPPPPLISANKNAGPPPPPPPPLTSGNKNGGPPPPPPNPLSMKSGPKPPPPPATVGKPVEEPSTSNADQVKLKPLHWDKVITRDTSHSMVWDRIDGGSFRFDGDLMEALFGTVATNRKSPRQTRDPAASTGGDSKAPAKIFILDSKKSQNTAIVIKSMSISRDEIVDALMDGHGLESDVLEKLTKIAPNQEEQSHIRNFEGDSLNLADAESFLFKLLKDVPSAFTRLDTMLFRSTYDSDILHLKEYLESIESGCKELRTQGLFMKLLEAVLKAGNRMNAGTSRGNAQAFNLSALRKLSDVKSTDGKTSLLHFVVEEVVRSEGKKCVLNKNKSFSRSSSKSSSNSINSDSSTSKDERMNEYTTLGLPIVGGLSAQFSNVKKAAAIDYNTFFGICSGLISRTSEIRQILPKCAGDGGTFVKETENFLESSEKELKKLREEQTRVMELVKTTTGYYQAEGFKGQEVQPLQIFVIVKEFLDMVDQVCVGIARNLQKKKSSMATTGSPSTKSPPLKTQLRFPFPNLAAHFLSDKSLSRSSSSDDSDD 728
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 44236078 44238743 - Bda015684.1 Bda10g01006 14894
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda10g01006 728 MobiDBLite consensus disorder prediction 299 321 - -
Bda10g01006 728 SMART it6_source 248 680 IPR015425 -
Bda10g01006 728 CDD TM_EGFR-like 71 103 - -
Bda10g01006 728 SUPERFAMILY Formin homology 2 domain (FH2 domain) 218 679 - -
Bda10g01006 728 Coils Coil 604 631 - -
Bda10g01006 728 MobiDBLite consensus disorder prediction 181 243 - -
Bda10g01006 728 ProSiteProfiles Formin homology-2 (FH2) domain profile. 248 691 IPR015425 -
Bda10g01006 728 MobiDBLite consensus disorder prediction 103 122 - -
Bda10g01006 728 Gene3D Formin, FH2 domain 269 691 IPR042201 -
Bda10g01006 728 MobiDBLite consensus disorder prediction 680 700 - -
Bda10g01006 728 Pfam Formin Homology 2 Domain 252 665 IPR015425 -
Bda10g01006 728 PANTHER FORMIN-RELATED 1 171 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Bda10g01006 728 PANTHER FORMIN-RELATED 183 723 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Bda10g01006 728 MobiDBLite consensus disorder prediction 519 542 - -
Bda10g01006 728 MobiDBLite consensus disorder prediction 519 537 - -
Bda10g01006 728 MobiDBLite consensus disorder prediction 301 315 - -
Bda10g01006 728 MobiDBLite consensus disorder prediction 680 697 - -
Bda10g01006 728 MobiDBLite consensus disorder prediction 174 257 - -
Bda10g01006 728 PANTHER FORMIN-LIKE PROTEIN 4 1 171 - -
Bda10g01006 728 PANTHER FORMIN-LIKE PROTEIN 4 183 723 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda10g01006 Bda-Chr10:44236078 Bda14g00829 Bda-Chr14:6373989 3.20E-142 dispersed
Bda10g01006 Bda-Chr10:44236078 Bda07g00336 Bda-Chr7:4440760 3.65E-92 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda10g01006 - - jre:108989824 637.876