Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda10g01007 ATGGCGAGAAACGGCGTCGTTTCTTGGAGGAAACGGTTCGGGAAAACGCAGAGTGGATGCTGTGATTCATTTCCCACGTCTGATTCAGATGAAGTTCATGTCCTCGCCGTGGATGACAGTCTGATTGATCGGACTGTAATTGAACGCTTGCTCAAAATTTCTTCCTGCAAAGTTACGGCGGTGGACAGCGGGAGGAGAGCTCTGCAATACCTCGGATTAGATGACGAAACAAGCTCCTCCGATGACTACGACGGTCTGAAAGTGGACATGATCATCACCGATTACTGCATGCCGGGAATGACCGGGTTCGAGTTGCTTAAGAAAATTAAGGAATCATCTACCCTAAGAGAAATACCCGTGGTAATCATGTCGTCGGAAAATATATTAGCCCGAATAGACAGCAGGTGTTTGGAAGAAGGTGCAGAGGATTTCATAGTGAAACCGGTGAAATTATCAGATGTGGAAAGGCTCAGGGATTACATGAAGAGAGACTCCATTAATGAACATAGCAGCAGTGGTGTCCATAAAAGGAAAGTACGAGATTTCACTGACGTGGAATCATCATCACCGACCATTTCATCATTTTCGCCATCAAGATCTTCTTCGTCGTGTTCCGTTCCTTCTTCTTCCCCTACATCGCTCGATTCGCCGATCGGACGGCTGAAAATGACCACGACCACGACAGATTGA 690 46.81 MARNGVVSWRKRFGKTQSGCCDSFPTSDSDEVHVLAVDDSLIDRTVIERLLKISSCKVTAVDSGRRALQYLGLDDETSSSDDYDGLKVDMIITDYCMPGMTGFELLKKIKESSTLREIPVVIMSSENILARIDSRCLEEGAEDFIVKPVKLSDVERLRDYMKRDSINEHSSSGVHKRKVRDFTDVESSSPTISSFSPSRSSSSCSVPSSSPTSLDSPIGRLKMTTTTTD 229
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 44240060 44241171 - Bda015685.1 Bda10g01007 14895
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda10g01007 229 Pfam Response regulator receiver domain 34 154 IPR001789 GO:0000160
Bda10g01007 229 SMART REC_2 32 158 IPR001789 GO:0000160
Bda10g01007 229 MobiDBLite consensus disorder prediction 168 184 - -
Bda10g01007 229 MobiDBLite consensus disorder prediction 168 229 - -
Bda10g01007 229 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR3-RELATED 15 216 - -
Bda10g01007 229 Gene3D - 32 191 - -
Bda10g01007 229 PANTHER TWO-COMPONENT RESPONSE REGULATOR 15 216 IPR045279 GO:0009736
Bda10g01007 229 MobiDBLite consensus disorder prediction 185 229 - -
Bda10g01007 229 CDD REC_typeA_ARR 34 157 - -
Bda10g01007 229 SUPERFAMILY CheY-like 32 156 IPR011006 -
Bda10g01007 229 ProSiteProfiles Response regulatory domain profile. 33 162 IPR001789 GO:0000160
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda07g01573 Bda-Chr7:29161978 Bda10g01007 Bda-Chr10:44240060 9.69E-108 dispersed
Bda10g01007 Bda-Chr10:44240060 Bda14g00828 Bda-Chr14:6372462 6.67E-55 dispersed
Bda10g01007 Bda-Chr10:44240060 Bda11g01678 Bda-Chr11:50923039 1.50E-66 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
16537 PF00072 Response_reg 1.60E-20 CL0304 Bda TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda10g01007 K14492 - mnt:21410451 265.003