Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda10g01016 ATGGCATCGAGATCATGTGCAAACTTTTTGGACTTGGCTTCTGGAGACTTGTTGGATATTCCTGATACTCCCAAGTCATTGCCACGAGTAATGACTGTTCATGGAATAATATCTGACATGGATGGTTATTGCAGTAATGATGCCGATTCAGAATCTTCTTCTGTATGTCATGATCGGAAAATTATTGTTGCAAATATGTTACCATTGCATGCTAAAAAGGACAGTGTATCTTCCAAATGGCCTAACTATAACCCAATAATTCTAATCGATCGCCATGTTCCTCGTTTTGAAAAGACTGCATATTACGCACTAGCGGAATGCTGCTTGGTGAATGCTGTGAGGGATGGGATGAACTTGGTTCCGTACAAGTATATTGTCTGCAGGGAAGGAACTCCAAACATGGACGAGGCTATGGGTATTGAAACTACTTGTCGTCGGACTAGCATGCTTGTTGTTTCTGAGTTCATTGGTTGCTCTCCTTCTTTAAGTGGAGCAATCAGGGTGAACCCTTGGGACATTGATGCTGTTGCTGATGCCTTAGATTTGGCAATTAGCATGCCAGATTCAGAGAAACAACTGCGGCACGAGAAACATTATCGTTATGTCAGTTCTCACGATGTAGGGTATTGGGCCCGCAGCTTTATGCAAGATTTAGAGAGAGCTTGCCAGGAACATTATAGTAAGCGGTGTTGGGGAATTGGTTTGGGCCTGAGGTTCAGAGTTGTTGCTCTTAATCCTGGTTTTAGAAAGTTGTGCGTTGACCACATTGTCTCAGCTTATAAACGAACTCAGAGGAGAGCTATATTTCTAGATTATGATGGTACTGTCGTTCCACAGAATTCAATAATAAAGACTCCTAGCCCAGAAGTCATTTCTGTTCTTAGAGCCCTCTGTGACGATCCAAAGAACATCGTGTTTATCGTAAGTGGAAGGGGGAGAATTCCTTTGAGCGACTGGTTTTCTTCTTGTGAATTGCTGGGCATTGCAGCCGAACATGGCTACTTTACAAGGTGGGGTGGAAATTCAGAGTGGGAAATTAGTCCGGCAACTTGTGATCTTGATTGGATTAAAATTGTCGATCCAGTGATGCGATCGTATACAGAGGCAACTGATGGTTCGTACATAGAGACTAAAGAGAGTGCATTGGTTTGGCATCACAGGGATGCAGATTCTGACTTTGGGTCTTGCCAAGCCAAAGAACTACTAGGAGTGAACAAGGGTCTGGTGGCTGAAAAGGTTCTCATGAAAATGGTGAATGGTGGGAAGCCTCCTGATTTTGTCATGTGTGTAGGAGACGATAGATCCGACGAAGACATGTTCGAGGGCATACTAAGCACTATCTCTAGCTCTTCCTTGCCAGTAGCTCCTGAGATTTTCGCCTGCACTGTCGGGCGGAAGCCAAGCAAAGCCAAGTTTTATCTCGATGACCCATCAGACGTCGTGAAATTGCTGCAAGGCCTGGCTTCTGCATCATGTCCAAAGCCTAGGCATCTTACACAAACCCAGGTATCTTTCGAAAGCATCACTTGA 1530 44.31 MASRSCANFLDLASGDLLDIPDTPKSLPRVMTVHGIISDMDGYCSNDADSESSSVCHDRKIIVANMLPLHAKKDSVSSKWPNYNPIILIDRHVPRFEKTAYYALAECCLVNAVRDGMNLVPYKYIVCREGTPNMDEAMGIETTCRRTSMLVVSEFIGCSPSLSGAIRVNPWDIDAVADALDLAISMPDSEKQLRHEKHYRYVSSHDVGYWARSFMQDLERACQEHYSKRCWGIGLGLRFRVVALNPGFRKLCVDHIVSAYKRTQRRAIFLDYDGTVVPQNSIIKTPSPEVISVLRALCDDPKNIVFIVSGRGRIPLSDWFSSCELLGIAAEHGYFTRWGGNSEWEISPATCDLDWIKIVDPVMRSYTEATDGSYIETKESALVWHHRDADSDFGSCQAKELLGVNKGLVAEKVLMKMVNGGKPPDFVMCVGDDRSDEDMFEGILSTISSSSLPVAPEIFACTVGRKPSKAKFYLDDPSDVVKLLQGLASASCPKPRHLTQTQVSFESIT 509
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 44329733 44332500 - Bda015694.1 Bda10g01016 14904
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda10g01016 509 CDD HAD_TPP 267 482 - -
Bda10g01016 509 Pfam Glycosyltransferase family 20 82 219 IPR001830 GO:0003824|GO:0005992
Bda10g01016 509 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 1 80 IPR001830 GO:0003824|GO:0005992
Bda10g01016 509 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 82 402 IPR001830 GO:0003824|GO:0005992
Bda10g01016 509 Gene3D Glycogen Phosphorylase B; 70 203 - -
Bda10g01016 509 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE [UDP-FORMING] 9-RELATED 1 80 - -
Bda10g01016 509 Gene3D - 265 498 IPR023214 -
Bda10g01016 509 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE [UDP-FORMING] 9-RELATED 82 402 - -
Bda10g01016 509 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 403 498 IPR001830 GO:0003824|GO:0005992
Bda10g01016 509 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE [UDP-FORMING] 9-RELATED 403 498 - -
Bda10g01016 509 SUPERFAMILY HAD-like 266 487 IPR036412 -
Bda10g01016 509 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 81 223 - -
Bda10g01016 509 Pfam Trehalose-phosphatase 403 478 IPR003337 GO:0003824|GO:0005992
Bda10g01016 509 Pfam Trehalose-phosphatase 269 402 IPR003337 GO:0003824|GO:0005992
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda10g01016 Bda-Chr10:44329733 Bda11g00014 Bda-Chr11:210111 1.86E-06 dispersed
Bda10g01016 Bda-Chr10:44329733 Bda07g01593 Bda-Chr7:29562641 1.54E-37 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda10g01016 K16055 - csv:101212688 719.153