Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda10g01025 ATGTCGACTCCCGAGTCGCCTCTACAAAATAGCACGGGGGAGTCGAAGACAGCCGGCCTGAACCCTCCTCCTCCTCCTCCGATTTCGCCCCCTCCTCCTCCCTCAGGTGAGGTTCCTCTGCCGACTGGTTTTCTGTTGACGAGCTCAAACTCTACGCCTCCCTCGCCTCCGCCACCGGTTTCACCTTCGCCGCCTTTGCTATCCCCGCCACCTCCGTCAAGTTCTCCTCCCGTTCCAGCTTCGTCACCTCCACCATCGCCGTCAAATTCGAATTCTCCGTCACCTCCTCCGCCTACGTCATCTTCCAGTGCTGCTCCTCCTCCTCCTCCTCCCGTTGCTGCTAATCCACCTCCCCCGACATCTGGAGGTCAACAATCTCAACCCTCTCTCAGTCCTCCTCCACCTTCGAATAAAAATCCAGCTCCAACTTCTGGACGCCCTAAATTATCTCCACCACCTCCCCCCTTAAACCCTCAACAAAGTGTTGTATCTCCCCCTGTAATTCCTACTCCTGGTTCGCCTCTCTCAAAATCTCCGCCTCCATCAAAGTTATCTTCTCCAGCGGTTTTTGGTAGAGCTCCCCCTCCTCCGTTAACTACGCGAACGACTAAGTTGTCACCTCCTTCTAAATCCGCAAAATCCCCTTCAACAGGATCGAAATCTCATCGGAACCCTGAAACCGCCATTGCTGTGGGTATCGCCGGAATTTTCGTAGTTTTTGTAATCGGTTTCATATTTTTGGCCTCAAGGAGGAGAAAAAGACGCAGACAAATAATCTACACTCCCCAGTACGTAGCGCCGGCTAACTTTTCAATGAAACCACATGGAAATTACTATGTACAGCAACAAAGTATGGTCAATTCTGGTCCCGCGGAGGGCTTCTATTCTCAACCTTCACCTCCTTCTTTTATAAACAACGCCTATGAAAGTCAAAGAACAAATACCTATAATGGTGGCAGTGGAGGTGCTGATTCTGGAGTAATAAGCAATGCTAAAACCTTCTTCAGCTATGAGGAGCTGATGGAGATTACAAATGGATTTTCCCGTCAAAACATTTTAGGAGAGGGTGGATTCGGATGCGTATACAAAGGGTGGCTTCCGGATGGCAAGGTGGTTGCTGTTAAGACGCTCAAGGCAGGTAGTGGACAGGGAGAAAGGGAATTCAGGGCAGAAGTCGAGATTATTAGTCGCGTTCATCATCGACATTTGGTGTCTCTAGTCGGTTATTGCATCTCCGAGCAAAACAGATTGCTGATCTATGAGTTTGTTCCGAATAAGACTCTTGAGCACCATTTGCATGGTAAAGGACTGCCGGTGTTGAGTTGGACCAAAAGAATAAAGATTGCTTTAGGATCTGCTAAGGGTTTGGCATACTTGCATGAAGATTGCCATCCAAAAATTATTCATCGAGATATTAAGTCGGCAAATATCCTGTTGGATGATGCGTTTGAGGCACAGGCAACAGATTTTGGACTTGCGAAACTAACTAATGACACGTCCACTCATGTTTCGACTCGAGTCATGGGAACATTTGGATATATGGCACCTGAATATGCATCAAGTGGGAAACTAACTGATAGATCAGATGTTTTCTCTTTCGGAGTTATGCTTCTTGAGCTCATAACCGGGCGTAAACCAGTTGACACGACTCAGCCTTTGGGGGATGAGAGTTTAGTTGAATGGGCTCGTCCACTCCTTATCGATGCCCTTGAAACCCTCGAATTTAAAGAACTAGTAGATCCAAGACTTGAAAAGCATTATGTTGAAAGTGAAATGCTCAGAATGATTGAAGCAGCCGCTGCTTGCATTCGACATTCAGCTCAAAAACGGCCTCGCATGGCTCAGGTGGTGAGATCTTTGGATACTGAAAGTGAAATGTCTGATCTTTCCAATGGAGTAAAATTTGGACAGAGCACTATGTATGATTCTGGTCAATACAACCAAGACATCAACAGATTCAGAAAGATGGCTCTTGGTCTCAGCAAAGACAGCTCTGAATATGAAATTTACAGTGGAGAATACAACTCCAGAGAGCTTTCGCCAATCCCAAATTCATCCAACTATCGAGACGGTTCGAGCAGCGAATCAGAAACACAAGCGTTCAACACTCGTACTAGTGAGCAGAAGTATATACAGCCTCCAATCCACTTCAACAATCGACGATTTTGA 2169 46.93 MSTPESPLQNSTGESKTAGLNPPPPPPISPPPPPSGEVPLPTGFLLTSSNSTPPSPPPPVSPSPPLLSPPPPSSSPPVPASSPPPSPSNSNSPSPPPPTSSSSAAPPPPPPVAANPPPPTSGGQQSQPSLSPPPPSNKNPAPTSGRPKLSPPPPPLNPQQSVVSPPVIPTPGSPLSKSPPPSKLSSPAVFGRAPPPPLTTRTTKLSPPSKSAKSPSTGSKSHRNPETAIAVGIAGIFVVFVIGFIFLASRRRKRRRQIIYTPQYVAPANFSMKPHGNYYVQQQSMVNSGPAEGFYSQPSPPSFINNAYESQRTNTYNGGSGGADSGVISNAKTFFSYEELMEITNGFSRQNILGEGGFGCVYKGWLPDGKVVAVKTLKAGSGQGEREFRAEVEIISRVHHRHLVSLVGYCISEQNRLLIYEFVPNKTLEHHLHGKGLPVLSWTKRIKIALGSAKGLAYLHEDCHPKIIHRDIKSANILLDDAFEAQATDFGLAKLTNDTSTHVSTRVMGTFGYMAPEYASSGKLTDRSDVFSFGVMLLELITGRKPVDTTQPLGDESLVEWARPLLIDALETLEFKELVDPRLEKHYVESEMLRMIEAAAACIRHSAQKRPRMAQVVRSLDTESEMSDLSNGVKFGQSTMYDSGQYNQDINRFRKMALGLSKDSSEYEIYSGEYNSRELSPIPNSSNYRDGSSSESETQAFNTRTSEQKYIQPPIHFNNRRF 722
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 44365833 44369556 + Bda015703.2 Bda10g01025 14913
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda10g01025 722 CDD STKc_IRAK 353 621 - -
Bda10g01025 722 MobiDBLite consensus disorder prediction 677 713 - -
Bda10g01025 722 MobiDBLite consensus disorder prediction 51 181 - -
Bda10g01025 722 MobiDBLite consensus disorder prediction 1 223 - -
Bda10g01025 722 SMART serkin_6 347 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda10g01025 722 MobiDBLite consensus disorder prediction 676 722 - -
Bda10g01025 722 Gene3D Transferase(Phosphotransferase) domain 1 423 638 - -
Bda10g01025 722 MobiDBLite consensus disorder prediction 19 39 - -
Bda10g01025 722 Gene3D Phosphorylase Kinase; domain 1 313 422 - -
Bda10g01025 722 MobiDBLite consensus disorder prediction 1 18 - -
Bda10g01025 722 SUPERFAMILY Protein kinase-like (PK-like) 328 620 IPR011009 -
Bda10g01025 722 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK13-RELATED 54 684 - -
Bda10g01025 722 ProSitePatterns Protein kinases ATP-binding region signature. 353 375 IPR017441 GO:0005524
Bda10g01025 722 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 54 684 - -
Bda10g01025 722 ProSitePatterns Serine/Threonine protein kinases active-site signature. 467 479 IPR008271 GO:0004672|GO:0006468
Bda10g01025 722 Pfam Protein kinase domain 348 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda10g01025 722 ProSiteProfiles Protein kinase domain profile. 347 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda10g01025 722 MobiDBLite consensus disorder prediction 203 223 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda02g00753 Bda-Chr2:48279042 Bda10g01025 Bda-Chr10:44365833 1.50E-07 dispersed
Bda09g01454 Bda-Chr9:46401570 Bda10g01025 Bda-Chr10:44365833 2.47E-70 dispersed
Bda10g01025 Bda-Chr10:44365833 Bda07g01515 Bda-Chr7:28206869 3.08E-169 dispersed
Bda04g00047 Bda-Chr4:764067 Bda10g01025 Bda-Chr10:44365833 3.36E-60 transposed
Bda07g00602 Bda-Chr7:7357671 Bda10g01025 Bda-Chr10:44365833 9.19E-31 transposed
Bda07g01069 Bda-Chr7:12532683 Bda10g01025 Bda-Chr10:44365833 2.67E-178 transposed
Bda10g01025 Bda-Chr10:44365833 Bda07g01602 Bda-Chr7:29691199 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69879 PF00069 Pkinase 6.90E-46 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda10g01025 - - mnt:21410374 691.804