Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda10g01040 ATGAGTCGCAAGCGCGAAAGGCCCTTCTACGCCCGCCATCTCTCCGTCTCCGCACCCAAGAGGCGCCGCCCTTTGCCCCCACTATCTCCGCTTCCAGAGGAAGACATCGACACGCCAACGTTCAAACCTGCTCCTCCGCCTGCCTTAATGGTGGTAGGTCTACCTCATGATTGCTCGGTGCTTGATCTGAAATCTCGATTTGAGATCTACGGTTCTATATCCCGCATTCGCATCGACCGCGATGGTGTTGGATATCTCACTTATCGCACCAAAGAATCGGCTGATGAAGCCATTGCCGCTAGCCTCGATTCTTCCTTCGGCATCACCGTGGACTCCAAAAAGGTGCAGGTATTGTGGGCGACTGATCCCCTTGCTCAATGGAGGCAAGGGATTAACGTTGGTATTAATCAAGATAATGGGTCATCTTCCAAGCTTCTGAGAGGAGAGGTACCTCTGAGCAGGCGTGGAAGAGGTAGTAAACTTGCCTCAACTGTCGTAAATCCCGGAAATAGCGAGAGCACTTCCCGGTCAGAAGTTCCTTTCAAAGGGAGAGAAATGGTTGCATATGATGATATTCTGTGA 582 51.55 MSRKRERPFYARHLSVSAPKRRRPLPPLSPLPEEDIDTPTFKPAPPPALMVVGLPHDCSVLDLKSRFEIYGSISRIRIDRDGVGYLTYRTKESADEAIAASLDSSFGITVDSKKVQVLWATDPLAQWRQGINVGINQDNGSSSKLLRGEVPLSRRGRGSKLASTVVNPGNSESTSRSEVPFKGREMVAYDDIL 193
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 44467631 44468813 - Bda015720.1 Bda10g01040 14928
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda10g01040 193 MobiDBLite consensus disorder prediction 1 40 - -
Bda10g01040 193 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 49 100 IPR000504 GO:0003723
Bda10g01040 193 SUPERFAMILY RNA-binding domain, RBD 23 130 IPR035979 GO:0003676
Bda10g01040 193 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 47 122 IPR000504 GO:0003723
Bda10g01040 193 SMART rrm1_1 48 118 IPR000504 GO:0003723
Bda10g01040 193 Gene3D - 33 165 IPR012677 -
Bda10g01040 193 MobiDBLite consensus disorder prediction 23 40 - -
Bda10g01040 193 CDD RRM_SF 49 117 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda10g01040 - - bhj:120081339 259.996