Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda10g01064 CCCTGTTCTTGTTCTATGGGTTCCGAACCTGAAATTTCTGAAATTTCTTCTCTGTTTGAGAGACTGATGAGTAGCAGAGACTTGTCTGTGTTCTTCCCCTTTTTATTCGGATTCAATGAAGAAAACCCGGACCGAGAAAACGGTGATAATAGATCAAACGGTAGAGATAGGATCATCCTCATCAATCCTTTTACTCAAGGAATGGTGGTGATTGAAGGTGCTTCTAGCTTTGAATCGCTCCTCCGAGAACTGGGTAGAAAAAAGGGGCAACCACCTGCGTCGAAAGCCTCAATCGAAGCGATGGAATCTGAAGAAATACGAGAAGAGGGCGAGTGTACGATATGCTTAGATGAGTTTGAAATCGGTTGCGTGGTTAAAAAAATGCCGTGTGACCATAAATTTCACGGTGATTGTTTAAAAAAGTGGCTTGAAATTCATGGGTCTTGTCCGGTTTGTAGATTTTTGATGCCTGTTGATGAAGAAGTCGGGAAGAAAAGTGAGGGCGACAGTGAGAGGGAGATTTGGGTCAGTTTTTCTTTCAGTAATGGTAGCAGAAATTTGGATTCTAGTCAAAGTTCTTCGAGTGGGTCCGATAGTTCTTCTTCGAGATCTGATGAATTTGATGGGTAG 630 42.54 PCSCSMGSEPEISEISSLFERLMSSRDLSVFFPFLFGFNEENPDRENGDNRSNGRDRIILINPFTQGMVVIEGASSFESLLRELGRKKGQPPASKASIEAMESEEIREEGECTICLDEFEIGCVVKKMPCDHKFHGDCLKKWLEIHGSCPVCRFLMPVDEEVGKKSEGDSEREIWVSFSFSNGSRNLDSSQSSSSGSDSSSSRSDEFDG 209
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 44663236 44663865 + Bda015744.1 Bda10g01064 14952
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda10g01064 209 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 81 158 IPR013083 -
Bda10g01064 209 ProSiteProfiles Zinc finger RING-type profile. 112 153 IPR001841 -
Bda10g01064 209 MobiDBLite consensus disorder prediction 181 202 - -
Bda10g01064 209 PANTHER - 13 166 - -
Bda10g01064 209 MobiDBLite consensus disorder prediction 181 209 - -
Bda10g01064 209 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 13 166 - -
Bda10g01064 209 SMART ring_2 112 152 IPR001841 -
Bda10g01064 209 SUPERFAMILY RING/U-box 100 158 - -
Bda10g01064 209 Pfam Ring finger domain 111 153 IPR001841 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda07g01466 Bda-Chr7:27327867 Bda10g01064 Bda-Chr10:44663236 1.88E-90 dispersed
Bda10g01064 Bda-Chr10:44663236 Bda02g00580 Bda-Chr2:46671597 2.19E-23 dispersed
Bda10g01064 Bda-Chr10:44663236 Bda09g01297 Bda-Chr9:44825483 1.68E-24 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda10g01064 - - zju:107429014 218.394