Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda10g01067 ATGGCAGTCACTGTGTTTTTGGTGGTGGGTTTTCTTGCTGTTCTCGTCTCTTCTGCAAAAGGGTATAATGGAGGAGGATGGAGCAATGCTCATGCAACCTTTTATGGCGGCGGTGATGCTTCTGGGACCATGGGAGGAGCTTGTGGGTATGGAAATCTGTACAGCCAAGGGTATGGGACGAACACAGCAGCCCTGAGCACAGCCCTGTTCAACAGCGGTCTGAGCTGTGGGTCTTGCTACGAGATTAAGTGCGTAAATGACGCCAAGTCGTGCCTGCCAGGCTCAATAGTGGTCACAGCCACCAACTTTTGCCCACCAAACAACGCCCTCCCTAACGATGCCGGCGGCTGGTGTAATCCTCCCCGGCAACATTTTGATCTCTCTCAGCCTGTTTTTCAGCACATTGCTCAGTACAAAGCTGGAATTGTGCCTGTCGCCTATAGAAGAGTGGCCTGCAGCAAAAAGGGAGGAATAAGGTTCACAATCAACGGCCATTCCTTCTTCAACCTAGTCCTCATCACCAACGTCGGCGGAGCCGGTGACGTCCATGCACTCTCCGTCAAAGGCTCAAAAACCGGCTGGCAACCCATGTCGAGAAACTGGGGCCAAAACTGGCAGAGCAACTCCTACCTAAACGACCAGAGCCTGTCTTTCAAGATCACCACTAGCGACGGTCAAACTATCATCTCAAACAATGTCGCTCCGGCCGGCTGGTCCTTCGGCCAGACCTTCAGTGGTAGCCAATTC 747 52.88 MAVTVFLVVGFLAVLVSSAKGYNGGGWSNAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNSGLSCGSCYEIKCVNDAKSCLPGSIVVTATNFCPPNNALPNDAGGWCNPPRQHFDLSQPVFQHIAQYKAGIVPVAYRRVACSKKGGIRFTINGHSFFNLVLITNVGGAGDVHALSVKGSKTGWQPMSRNWGQNWQSNSYLNDQSLSFKITTSDGQTIISNNVAPAGWSFGQTFSGSQF 249
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 44677129 44678069 - Bda033467 Bda10g01067 14955
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda10g01067 249 SUPERFAMILY PHL pollen allergen 154 245 IPR036749 -
Bda10g01067 249 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 167 246 IPR007117 -
Bda10g01067 249 PRINTS Expansin/Lol pI family signature 140 156 IPR007118 GO:0005576
Bda10g01067 249 PRINTS Expansin/Lol pI family signature 66 84 IPR007118 GO:0005576
Bda10g01067 249 PRINTS Expansin/Lol pI family signature 44 62 IPR007118 GO:0005576
Bda10g01067 249 PRINTS Expansin/Lol pI family signature 194 208 IPR007118 GO:0005576
Bda10g01067 249 PRINTS Expansin/Lol pI family signature 232 246 IPR007118 GO:0005576
Bda10g01067 249 PRINTS Expansin/Lol pI family signature 26 41 IPR007118 GO:0005576
Bda10g01067 249 PANTHER EXPANSIN 8 249 - -
Bda10g01067 249 SMART dpbb_1 62 147 IPR007112 -
Bda10g01067 249 PANTHER EXPANSIN-A15 8 249 IPR002963 GO:0009664
Bda10g01067 249 Pfam Lytic transglycolase 62 147 IPR009009 -
Bda10g01067 249 SUPERFAMILY Barwin-like endoglucanases 26 175 IPR036908 -
Bda10g01067 249 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 45 157 IPR007112 -
Bda10g01067 249 Gene3D - 14 153 IPR036908 -
Bda10g01067 249 Pfam Expansin C-terminal domain 158 235 IPR007117 -
Bda10g01067 249 Gene3D - 155 249 IPR036749 -
Bda10g01067 249 PRINTS Expansin signature 203 224 IPR002963 GO:0009664
Bda10g01067 249 PRINTS Expansin signature 232 248 IPR002963 GO:0009664
Bda10g01067 249 PRINTS Expansin signature 57 71 IPR002963 GO:0009664
Bda10g01067 249 PRINTS Expansin signature 115 132 IPR002963 GO:0009664
Bda10g01067 249 PRINTS Expansin signature 84 95 IPR002963 GO:0009664
Bda10g01067 249 PRINTS Expansin signature 132 145 IPR002963 GO:0009664
Bda10g01067 249 PRINTS Expansin signature 96 106 IPR002963 GO:0009664
Bda10g01067 249 PRINTS Expansin signature 168 189 IPR002963 GO:0009664
Bda10g01067 249 PRINTS Expansin signature 156 168 IPR002963 GO:0009664
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda10g01067 Bda-Chr10:44677129 Bda15g00274 Bda-Chr15:5518006 3.81E-142 dispersed
Bda06g00541 Bda-Chr6:7696263 Bda10g01067 Bda-Chr10:44677129 3.45E-144 transposed
Bda12g00165 Bda-Chr12:1575057 Bda10g01067 Bda-Chr10:44677129 1.59E-142 transposed
Bda10g01067 Bda-Chr10:44677129 Bda11g01211 Bda-Chr11:12476870 3.35E-157 wgd
Bda10g01067 Bda-Chr10:44677129 Bda07g01473 Bda-Chr7:27452304 8.19E-153 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda10g01067 - - qsu:112006857 447.588