Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda10g01071 ATGAGTTCCGGCGAGTCAGGAAGCGGCGGCGATTTGGTGGATGAGGGAACCTCCGGCTGCGGAGGAAGCTCAGCGGAAATGACGGAGAAGGAGAAGCAGAAGGAGAAGGCTAGAGTGAGTCGAACGTCGCAGATACTATGGCATGCTCATCAGAATGATATTGGCAGCGTTCGCAGGCTCCTGGAAGAGGATCGGTCTCTGGTGCAGGCTAAAGACTACGATAATCGCACACCTCTCCATGTGGCGGCGCTTCATGGTTGGATTGGCGTCGCGAAGTGCTTGATTGAATATGGGGCCGATGTTAATGCTCAGGATCGCTGGAAGAACACTCCTTTAGCTGATGCAGAAGGAGCTAAAAGATCTAGCATGATTGAGCTGCTGAAATCATACGGGGGCTTGTCGTACGGTCAAAATGGAAGCCACTTTGAACAAAAGCCTGTTCCACCTCCTATGCCAAACAAGTGGGACTGGGAGATCGATCCTTCCGAGTTAGATTTTTCAAATTCAATTCTTATCGGCAAGGGATCCTTTGGTGAGATATTGAAGGCCCATTGGCGTGGAACGCCTGTAGCGGTCAAACGGATCCTTCCATCACTTTCAGATGATAGATTGGTGATTCAGGACTTCAGGCATGAGGTTAATTTGCTGATGAAGCTTCGACACCCTAATATAGTCCAATTTCTTGGAGCTGTCACTGAGAAGAAGCCCCTTATGTTAGTGACTGAATATTTACGAGGGGGCGATCTTCATCAGTATCTAAAGGAGAAAAGATCACTTAGTACTTCAACAGCTATCAATTTTGCAATGGATATTGCCAGGGGCATGACTTATCTTCACAATGAGCCAAACGTTATCATTCATAGAGACCTTAAACCAAGGAATGTTCTTTTAGTCAATTCAAGTGCAGACCATTTAAAAGTTGGAGACTTTGGTCTTAGTAAGCTCATTAAGGTTCAGAATTCTCGTGATGTGTACAAAATGACAGGAGAGACAGGAAGTTACCGATATATGGCTCCTGAAGTTTTCAAACATAGAAAATATGACAAGAAAGTTGACGTTTTCTCTTTTGCAATGATACTGTATGAGATGCTTGAAGGAGATCCACCACTCGCCCACTACGAGCCATATGATGCAGCCAAATTTGTGGCAGATGGACATAGGCCTTTATTTCGTGCAAAAGGATACATTCCTGAACTGCGAGAATTGACCGAGGAATGTTGGGACCCTGACATGAACAAAAGACCTTCTTTCTTGGAAATTCTCAAGAGACTTGAGAAGATTAAGGAACATGTGCCAGCCGAACATCCCTGGAACATATTCAACTCTTAA 1329 45.15 MSSGESGSGGDLVDEGTSGCGGSSAEMTEKEKQKEKARVSRTSQILWHAHQNDIGSVRRLLEEDRSLVQAKDYDNRTPLHVAALHGWIGVAKCLIEYGADVNAQDRWKNTPLADAEGAKRSSMIELLKSYGGLSYGQNGSHFEQKPVPPPMPNKWDWEIDPSELDFSNSILIGKGSFGEILKAHWRGTPVAVKRILPSLSDDRLVIQDFRHEVNLLMKLRHPNIVQFLGAVTEKKPLMLVTEYLRGGDLHQYLKEKRSLSTSTAINFAMDIARGMTYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSRDVYKMTGETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGDPPLAHYEPYDAAKFVADGHRPLFRAKGYIPELRELTEECWDPDMNKRPSFLEILKRLEKIKEHVPAEHPWNIFNS 442
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 44708023 44711850 - Bda015750.1 Bda10g01071 14959
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda10g01071 442 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 24 434 - -
Bda10g01071 442 Gene3D - 21 139 IPR036770 -
Bda10g01071 442 PIRSF ILK 3 442 - -
Bda10g01071 442 ProSiteProfiles Ankyrin repeat region circular profile. 74 106 - -
Bda10g01071 442 ProSitePatterns Protein kinases ATP-binding region signature. 172 193 IPR017441 GO:0005524
Bda10g01071 442 Gene3D Phosphorylase Kinase; domain 1 150 245 - -
Bda10g01071 442 CDD STKc_MAP3K-like 172 424 - -
Bda10g01071 442 ProSiteProfiles Ankyrin repeat profile. 74 106 IPR002110 GO:0005515
Bda10g01071 442 Gene3D Transferase(Phosphotransferase) domain 1 246 437 - -
Bda10g01071 442 SMART ANK_2a 74 103 IPR002110 GO:0005515
Bda10g01071 442 Pfam Protein tyrosine and serine/threonine kinase 171 424 IPR001245 GO:0004672|GO:0006468
Bda10g01071 442 SUPERFAMILY Ankyrin repeat 43 131 IPR036770 -
Bda10g01071 442 ProSitePatterns Serine/Threonine protein kinases active-site signature. 285 297 IPR008271 GO:0004672|GO:0006468
Bda10g01071 442 SMART serkin_6 166 433 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda10g01071 442 PRINTS Tyrosine kinase catalytic domain signature 395 417 IPR001245 GO:0004672|GO:0006468
Bda10g01071 442 PRINTS Tyrosine kinase catalytic domain signature 241 254 IPR001245 GO:0004672|GO:0006468
Bda10g01071 442 PRINTS Tyrosine kinase catalytic domain signature 279 297 IPR001245 GO:0004672|GO:0006468
Bda10g01071 442 ProSiteProfiles Protein kinase domain profile. 166 438 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda10g01071 442 Pfam Ankyrin repeats (3 copies) 45 105 IPR002110 GO:0005515
Bda10g01071 442 SUPERFAMILY Protein kinase-like (PK-like) 147 437 IPR011009 -
Bda10g01071 442 PANTHER SERINE/THREONINE-PROTEIN KINASE STY8-LIKE 24 434 - -
Bda10g01071 442 MobiDBLite consensus disorder prediction 1 39 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda10g01071 Bda-Chr10:44708023 Bda15g00444 Bda-Chr15:7493005 5.91E-76 dispersed
Bda10g01071 Bda-Chr10:44708023 Bda11g01201 Bda-Chr11:12338750 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69881 PF07714 PK_Tyr_Ser-Thr 1.10E-64 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda10g01071 - - csv:101215575 771.155