Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda10g01073 ATGTCGGACGAGGAGCACCATTTCGAGTCGAAGGCCGACGCCGGAGCTTCAAAAACCTACCCGCAGCAGGCCGGAACTATTCGCAAGAATGGTTATATAGTCATCAAGGGCAGACCCTGCAAGGTTGTGGAGGTTTCCACTTCAAAAACTGGAAAGCATGGTCATGCTAAATGTCATTTTGTTGCCATCGACATCTTCACTGCCAAAAAGCTGGAAGATATTGTTCCTTCTTCCCACAACTGTGATGTGCCCCATGTTACCCGAACTGACTATCAGTTGATTGATATCTCTGAGGATGGATTTGTTAGTCTGCTGACCGACAATGGTAGTACCAAGGATGACCTGAGGCTTCCAACTGATGACAGCCTTCTGACTCAGATAAAAGATGGATTCTCTGAGGGTAAGGATCTGGTTGTCTCTGTTATGTCTGCAATGGGAGAGGAGCAGATTTGTGCTCTTAAAGACATCGGCCCCAAG 477 47.38 MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVAIDIFTAKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTDNGSTKDDLRLPTDDSLLTQIKDGFSEGKDLVVSVMSAMGEEQICALKDIGPK 159
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 44726450 44728559 - Bda033468 Bda10g01073 14961
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda10g01073 159 PIRSF Transl_init_eIF5A 1 157 IPR001884 GO:0003723|GO:0003746|GO:0043022|GO:0045901
Bda10g01073 159 PANTHER TRANSLATION INITIATION FACTOR 5A FAMILY MEMBER 1 156 IPR001884 GO:0003723|GO:0003746|GO:0043022|GO:0045901
Bda10g01073 159 SMART eIF_5a_2 85 154 IPR020189 GO:0003723|GO:0003746|GO:0043022|GO:0045901|GO:0045905
Bda10g01073 159 CDD S1_eIF5A 86 156 - -
Bda10g01073 159 Gene3D - 1 85 IPR014722 -
Bda10g01073 159 TIGRFAM eIF_5A: translation elongation factor IF5A 17 153 IPR001884 GO:0003723|GO:0003746|GO:0043022|GO:0045901
Bda10g01073 159 SUPERFAMILY Nucleic acid-binding proteins 86 156 IPR012340 -
Bda10g01073 159 Pfam Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold 85 154 IPR020189 GO:0003723|GO:0003746|GO:0043022|GO:0045901|GO:0045905
Bda10g01073 159 MobiDBLite consensus disorder prediction 1 21 - -
Bda10g01073 159 ProSitePatterns Eukaryotic initiation factor 5A hypusine signature. 50 57 IPR019769 GO:0003723|GO:0003746|GO:0043022|GO:0045901|GO:0045905
Bda10g01073 159 PANTHER BNAA07G09420D PROTEIN 1 156 - -
Bda10g01073 159 Gene3D - 86 158 IPR012340 -
Bda10g01073 159 SUPERFAMILY Translation proteins SH3-like domain 15 93 IPR008991 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g01013 Bda-Chr1:43700262 Bda10g01073 Bda-Chr10:44726450 4.61E-113 dispersed
Bda10g01073 Bda-Chr10:44726450 Bda11g01711 Bda-Chr11:51515960 1.98E-105 dispersed
Bda10g01073 Bda-Chr10:44726450 Bda11g01710 Bda-Chr11:51423275 9.70E-102 wgd
Bda10g01073 Bda-Chr10:44726450 Bda14g00862 Bda-Chr14:6643844 1.64E-106 wgd
Bda10g01073 Bda-Chr10:44726450 Bda07g01480 Bda-Chr7:27504947 1.09E-116 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda10g01073 K03263 K02180 ini:109166094 316.235