Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda10g01146 ATGGCTTTTGCCGCTGCATCTCATCATCCCTCTCGTGGTCACCATGCAGAGTTTGCAACTGATGCTCTGTACAAGGAATTATGGCATGCTTGTGCGGGCCCACTCGTCACCCTTCCTCATGAAGGGGAGCGTGTTTATTACTTTCCACAGGGTCATATGGAACAGCTAGAAGCGTCAATGCATCAAGGGCTAGAGCAGCAGATGCCTTCATTCAATCTGCCGTCAAAAATACTTTGTAAAGTTGTCAATGTTAGGCTTCGTGCTGAACCCGACACAGATGAAGTTTATGCACAAATAGCTTTGCTACCTGATAGAGATCAAAGTGAAGTAACGAGCCCTGATCCACCTGTCCTTGAGCCTCCTAGATGCACCGTCCATTCATTTTGCAAGACACTTACTGCTTCTGATACTAGCACACATGGCGGCTTCTCTGTTCTGAGGAGGCATGCAGATGATTGTCTGCCACCATTGGATATGTCGCAGCAACCACCATGGCAAGAATTGGTTGCTACTGATTTGCATAAAAATGAATGGCATTTCAGGCACATTTTTCGAGGTCAGCCTAGGCGCCATTTATTAACAACTGGGTGGAGTGTCTTTGTTAGTTCCAAGAAGTTGGTAGCTGGTGACGCCTTCATATTTCTTAGAGGGGAGAATGGGGAGCTTCGTGTGGGAGTGAGGCGACTCATGAGACAGCTGAACAATATGCCCTCTTCCGTTATTTCAAGTCACAGCATGCATCTTGGAGTTCTTGCTACTGCATCACATGCCGTTGCTACTGGAACACTATTTTCTGTATTTTACAAACCAAGAACAAGTAGGTCTGAATTCATTGTAAGTCTGAACAAGTACCTCGAAGCTCAAAGCCACAAGCTTTCCGTTGGAATGAGGTTTAAGATGAGATTTGAGGGGGAGGAAGTTCCTGAAAGAAGGTTCAGTGGCACGATTGTTGGTGTTGGAGATAGTATATCATCTGGGTGGGTTGATTCTGAGTGGCGATCTTTAAAGGTTCAATGGGATGAACCTTCATCCATCTTACGTCCAGAACGAGTTTCACCTTGGGAATTGGAGCCTCTTGTTCCAACTAATCCTCCAAGCTGCCAGCAAACACAAAGAAGCAAGCGTGCACGACCTGCTGTTTTATCTTCCCCAGCACCAGAGATATCTGTGCTTGGTGGATGGAAACCTCCAACTGAATCTCCTACCATTTCATATTCCGATCCACAGCGTGGAAAGGAGGTCTACCTATCTCCAAAGTTCAGCTCTACTGCAATTGCAAGCTCTTTTGGCTTTAATCGAAATGGCTCTCTTGGTTCAATTTCCAACAAATCATTGCATTGGACTAATCAGGTGGAATCTGTTACAGAATCTTTTTCCCCACTTGCTAACAACGAAGCGGCAGAAAAGAAGCAAAGTACTGGGAATGGATGCAGAATCTTTGGAATTGAGCTACTTGGCAATTCCACAATAGAAGATGCTTCACCTGCTACAGTTGCTAGGATGACAGTGGCTGATCGGCCTATTCCATCATTAGATACTGAATCTGACCAGCATTCTGAACCATCAAATGTTAATCGATCTGATATTCCTTCATTGAGTTGTGATGCTGAAAAATCATGCCTGAGATCTCCATATGATTCTCAGAGTAGGCAAATTCGTAGTTGCACAAAGGTTCACATGCAAGGGATTGCAGTAGGGAGGGCTGTGGACTTGACGCGATTTGATCGTTATGATGATCTGCTGAGGAAGCTGGAAGAGATGTTTGACATTGAAGGTGAGCTCCGGGGACCTACAAAGAAATGGCAAGTTGTCTATACTGATGATGAGGATGACATGATGATGGTTGGGGATGATCCATGGCATGAGTTCTGCAGCATGGTGAGGAAGATCTTCATCTACACGGCGGAGGAAGTAAAGATATTGTCTCCAAAGATAAAACTTGCAGCCAGAGACGATGCTAAGCCAAGAAATCCAGATTCCGAAATAGCCATCAACACCGAGGACAAATCCACAGGTCCTGGATGCTAA 2028 45.27 MAFAAASHHPSRGHHAEFATDALYKELWHACAGPLVTLPHEGERVYYFPQGHMEQLEASMHQGLEQQMPSFNLPSKILCKVVNVRLRAEPDTDEVYAQIALLPDRDQSEVTSPDPPVLEPPRCTVHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHKNEWHFRHIFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQLNNMPSSVISSHSMHLGVLATASHAVATGTLFSVFYKPRTSRSEFIVSLNKYLEAQSHKLSVGMRFKMRFEGEEVPERRFSGTIVGVGDSISSGWVDSEWRSLKVQWDEPSSILRPERVSPWELEPLVPTNPPSCQQTQRSKRARPAVLSSPAPEISVLGGWKPPTESPTISYSDPQRGKEVYLSPKFSSTAIASSFGFNRNGSLGSISNKSLHWTNQVESVTESFSPLANNEAAEKKQSTGNGCRIFGIELLGNSTIEDASPATVARMTVADRPIPSLDTESDQHSEPSNVNRSDIPSLSCDAEKSCLRSPYDSQSRQIRSCTKVHMQGIAVGRAVDLTRFDRYDDLLRKLEEMFDIEGELRGPTKKWQVVYTDDEDDMMMVGDDPWHEFCSMVRKIFIYTAEEVKILSPKIKLAARDDAKPRNPDSEIAINTEDKSTGPGC 675
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 45519615 45529283 - Bda015846.1 Bda10g01146 15034
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda10g01146 675 MobiDBLite consensus disorder prediction 650 675 - -
Bda10g01146 675 Pfam Auxin response factor 254 336 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Bda10g01146 675 MobiDBLite consensus disorder prediction 508 530 - -
Bda10g01146 675 MobiDBLite consensus disorder prediction 514 530 - -
Bda10g01146 675 Pfam AUX/IAA family 552 643 IPR033389 -
Bda10g01146 675 ProSiteProfiles PB1 domain profile. 553 645 IPR000270 GO:0005515
Bda10g01146 675 SMART B3_2 128 230 IPR003340 GO:0003677
Bda10g01146 675 CDD B3_DNA 126 228 IPR003340 GO:0003677
Bda10g01146 675 ProSiteProfiles B3 DNA-binding domain profile. 128 230 IPR003340 GO:0003677
Bda10g01146 675 SUPERFAMILY DNA-binding pseudobarrel domain 117 257 IPR015300 -
Bda10g01146 675 Gene3D - 125 230 IPR015300 -
Bda10g01146 675 SUPERFAMILY CAD & PB1 domains 554 630 - -
Bda10g01146 675 Gene3D - 291 362 - -
Bda10g01146 675 MobiDBLite consensus disorder prediction 357 408 - -
Bda10g01146 675 Pfam B3 DNA binding domain 128 228 IPR003340 GO:0003677
Bda10g01146 675 PANTHER AUXIN RESPONSE FACTOR 9 9 656 - -
Bda10g01146 675 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 9 656 IPR044835 GO:0003677|GO:0006355|GO:0009725
Bda10g01146 675 MobiDBLite consensus disorder prediction 362 377 - -
Bda10g01146 675 Gene3D - 548 642 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda08g00454 Bda-Chr8:4700324 Bda10g01146 Bda-Chr10:45519615 0 dispersed
Bda10g01146 Bda-Chr10:45519615 Bda11g01574 Bda-Chr11:48941667 3.02E-37 dispersed
Bda10g01146 Bda-Chr10:45519615 Bda06g00159 Bda-Chr6:2298415 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
16550 PF02309 AUX_IAA 7.70E-11 CL0072 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda10g01146 K14486 - zju:107431430 1103.2