Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda10g01151 ATGGGCTGCGTTTGCTCAAAGGGGAGCAAAGGGTCTGAGAAAGACTTTACCTTAGAGAATCACGTGAAGGGAAAACACCTCAAAGCAAACAAATCGTCTAGACTGTTGGGTTCCTCCTTGAGGAGAGACGAGGCTGCAGTAGATGGCGATGGAGGTGCAAATGAGGCGATGACGAGGTTAATATCTAATGATTCAAGGGAAGAGAACCTGGGATCCACTCCACCATCAAATTATGCTGAGAAAAATGTAATTACTATTGAGAAACCTGCAAAGCCACAGCTTCAAAGACACTCAACCATGCAGTCTACACCAAGTGGAGAACTTGTACGCTCTAAAGTATCGAGGATAGCTACTATTAGTAATGGGGAGAGAGGAGCACAGGTAGTTGCTGGATGGCCCTCTTGGTTGACTTCAGTGGCTGGAGAGGCAATTAATGGATGGGTGCCTCGAAGGGCAGACTCATTCGAGAAGTTGGAGAAGATTGGACAAGGAACATACAGCAGCGTGTATAGAGCTCGTGATTTAGAAACAAACAAGATGGTTGCTTTAAAGAAGGTTCGATTTGCTAATATGGATCCTGAAAGTGTTCGTTTTATGGCAAGGGAAATTCTCGTCCTGCGTAGGCTTGATCATCCAAATGTCATGAAACTCGAAGGGTTGATTACTTCTAGGGTTTCTGGCAGTTTGTACCTCATATTTGAGTACATGGAGCACGATCTTGCAGGGCTAATGGCAATGCCAGGGTTCAAGTTCACCGAATCACAGATAAAATGTTACATGCAACAGCTACTTCGTGGTCTTGAACATTGTCACAATCAGGGTGTTTTGCACCGTGACATCAAGGGCTCAAATCTACTAATTAACAATGATGGCAATCTGAAAATAGGTGATTTTGGTCTTGCGACCTTCTTCCATTCCCCTCAGAAGCAGACCCTTACAAGTCGCGTTGTAACTTTATGGTATCGGCCACCCGAGCTTCTGCTGGGGGCTACAGACTATGGAGTTTCTGTGGATTTATGGAGTACGGGTTGCATTCTTGCAGAATTGTTAGCTGGGAAGCCTATAATGCCAGGAAGAACAGAGGTGGAACAATTGCATAAGATTTTCAAGCTTTGTGGGTCGCCTTCTGAAGAGTATTGGAAGAAGTCAAAACTACCCCATGCAACCATTTTTAAACCCCAACATCCTTACAGACGTGTTGTTTCTGAGACATTTAGCCACTTTCCTTCATCTGCCTTAGCTCTTCTAGATGTTCTTCTTGCGATAGAACCGGAGGATCGAGGAACTGCTTCTTTTGCACTTCAGAATGAGTATTTCACCACAAGACCACTGCCCTCTGACCCGTCCACTTTGCCAAAATACCCCCCAAGCAAGGAGTTAGATGCCAAGCTTCGAGAAGAGGAAGCAAGGAGGCAAAAAGCGGCTGTTGGTGTGATTCGTGATCGTGATCCAAACAGAAAGAGCAACAAAGAATCTAGAGCTGTTCCTGCTCCTGATGCCAATGCCGAATTGCAGGCATCCTTAAATAAGCGACAAGGGCATTCTAATCCGAAGAGCATGAGCGAGAAGTTTGCTCCCGAAGAAGATGGTGGTTCTGGCTTTCCTATTGAGCCTCCGAGAGGAGCAGTTTTCTCCCATTCGGGTCAGTTAATGCACCCTAGTGCATTCGGGTCTTCACAAAACACGAATGTGAATGAGGGAAATTCTCTCATAGACGTGGGTTCCATTCGAGCGGCTGAAGTGGAATTAAGATCGCAGAGATCCTACATGCATCGCGGTGCATCCCAGTTATCGCGGTTTTCCAATTCAGTTGCAATTAGGGGCAATTCACAGTTTGATAGCGTCAGAGAAAGTGCTGGGAATCCTCACTGGCCGGAGGAACGATTTAGCTCCAGATACAACCATTTGAATGGCGGAGAGATCTCTGAAAATCATGACTGGGCACGCCATTTGCTGGACAAGCCTAAGCTTTTACATGATTTTTCCTTTTTACGTCTGTTTCAGGGTCACCTTCTGAAGAAAAATAGAATCCACTTCTCGGGGCCATTGATGCCTTCGGATGGAAACCTTGACGAAATGCTAAAAGAGCATGAAAAACAAATCCAGCATTCCGTTCGCAAAGCTCGATTGGACAAAGCCAAGACTAAGAAAACAAGCATCGACAACGGACAAGCGCAATCCCTACTTCACCATAGGTGA 2199 45.7 MGCVCSKGSKGSEKDFTLENHVKGKHLKANKSSRLLGSSLRRDEAAVDGDGGANEAMTRLISNDSREENLGSTPPSNYAEKNVITIEKPAKPQLQRHSTMQSTPSGELVRSKVSRIATISNGERGAQVVAGWPSWLTSVAGEAINGWVPRRADSFEKLEKIGQGTYSSVYRARDLETNKMVALKKVRFANMDPESVRFMAREILVLRRLDHPNVMKLEGLITSRVSGSLYLIFEYMEHDLAGLMAMPGFKFTESQIKCYMQQLLRGLEHCHNQGVLHRDIKGSNLLINNDGNLKIGDFGLATFFHSPQKQTLTSRVVTLWYRPPELLLGATDYGVSVDLWSTGCILAELLAGKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFKPQHPYRRVVSETFSHFPSSALALLDVLLAIEPEDRGTASFALQNEYFTTRPLPSDPSTLPKYPPSKELDAKLREEEARRQKAAVGVIRDRDPNRKSNKESRAVPAPDANAELQASLNKRQGHSNPKSMSEKFAPEEDGGSGFPIEPPRGAVFSHSGQLMHPSAFGSSQNTNVNEGNSLIDVGSIRAAEVELRSQRSYMHRGASQLSRFSNSVAIRGNSQFDSVRESAGNPHWPEERFSSRYNHLNGGEISENHDWARHLLDKPKLLHDFSFLRLFQGHLLKKNRIHFSGPLMPSDGNLDEMLKEHEKQIQHSVRKARLDKAKTKKTSIDNGQAQSLLHHR 732
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 45572664 45576882 + Bda015852.1 Bda10g01151 15039
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda10g01151 732 ProSitePatterns Protein kinases ATP-binding region signature. 161 184 IPR017441 GO:0005524
Bda10g01151 732 ProSitePatterns Serine/Threonine protein kinases active-site signature. 275 287 IPR008271 GO:0004672|GO:0006468
Bda10g01151 732 CDD STKc_CDK9_like 155 439 - -
Bda10g01151 732 MobiDBLite consensus disorder prediction 464 561 - -
Bda10g01151 732 MobiDBLite consensus disorder prediction 89 109 - -
Bda10g01151 732 MobiDBLite consensus disorder prediction 464 493 - -
Bda10g01151 732 Pfam Protein kinase domain 155 439 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda10g01151 732 SMART serkin_6 155 439 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda10g01151 732 MobiDBLite consensus disorder prediction 703 718 - -
Bda10g01151 732 Gene3D Phosphorylase Kinase; domain 1 142 237 - -
Bda10g01151 732 PANTHER KINASE CDK9, PUTATIVE-RELATED 102 712 - -
Bda10g01151 732 PANTHER CELL DIVISION PROTEIN KINASE 102 712 - -
Bda10g01151 732 SUPERFAMILY Protein kinase-like (PK-like) 148 446 IPR011009 -
Bda10g01151 732 MobiDBLite consensus disorder prediction 92 109 - -
Bda10g01151 732 MobiDBLite consensus disorder prediction 505 519 - -
Bda10g01151 732 ProSiteProfiles Protein kinase domain profile. 155 439 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda10g01151 732 MobiDBLite consensus disorder prediction 703 732 - -
Bda10g01151 732 Gene3D Transferase(Phosphotransferase) domain 1 238 478 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g00348 Bda-Chr3:2930185 Bda10g01151 Bda-Chr10:45572664 0 dispersed
Bda07g00297 Bda-Chr7:4073929 Bda10g01151 Bda-Chr10:45572664 0 dispersed
Bda10g01151 Bda-Chr10:45572664 Bda11g00934 Bda-Chr11:9121454 3.98E-12 dispersed
Bda10g01151 Bda-Chr10:45572664 Bda09g00506 Bda-Chr9:6707338 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69882 PF00069 Pkinase 2.10E-69 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda10g01151 - - csv:101214435 973.0