Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda10g01169 ATGATTCTTGGGGACTTCTGGCTTGTCGTCCTCTTTTTCGGAGTCTGCTTCGAAGCTCAGCTCCTGCATTCTCAAAACCTAACCTGCAATTCAGATGATTTGCAGGCGTTGGAAGATATCTTCGAGGGTATGGACTCTAAAATTAACGGCTGGGGCACTAACGTTTCGACTGATTGCTGCGTCTGGCCTGGAATCACTTGCAATTCTTCGTCGACTATGGGGGTTAACGTTACTTTAGGGACTGGTAGAGTTGTGAAGATCGACCTTGGTGGAAAGAAGCTAACGGGGAAACTTTCTGACTCCATTGGCCGGCTGGAGCAGCTTGAACATCTCAATCTCTCTCAAAATTTTCTAAAGAGTTCGCTTCCTTCTTCGTTGTTCCAGCTGCCTAAATTGGAGGTACTCGACCTAAGTTCCAATGATTTATCCGGGTCTATTCCGGCGACCTTCAATCTACCTGCGATTCAGCTGCTTGATTTGTCTCAGAACTACTTGAATGGCTCTCTCCCACCTTATTTATGCCATAACTCTTCCAGAATTAGGGTGTTGGATCTGGGTTTCAACTATTTCTCCGGCAGTTTTCCTCCTGGTATTGGCAACTGCACCTTCTTAGAAACCTTCTCTCTGGAGACTAATGACCTCACCGGCGACATTCCCGACGACATATTCGGGCTGCAAAAATTGACCTTGTTGAGCCTCCGAGACAACCTGTTTTCAGGACAGCTGAACGAGCTGATTGGTAATCTCCCAAATCTTGTTCGCCTGGATATTGCTTACAATAGATTTTCAGGAGAAATTCCAGATGTTTTTTACACCTCCAAAAATTTGCAGTTCTTAGTGTTGGAATCTAACAATTTCACTGGTCAAATACCGAATTCGTTATCTAGTTCTCCGACGGTAAATCTCCTAAACTTGAGGAACAATTCTTTAACGGGTCCTATCGATATTAACTGTTCAGCCATGGCTAACCTGACCTCTCTTGATTTGGGAACTAATTGGTTTTACGGTCCTGTTCCAAGCAATCTTCCGGCTTGTCAACGGCTAAAAAACATAAATCTAGCCCGAAATAACTTCATCGGAGATATCCCTGAAACCTTCAAGACTTTTCAGAGCCTTTCTTATCTTTCACTGTCCAATTCAAGCATAGTCAATCTCCACTCTGCACTTGACATCTTGCAGCACTGCAAGAACTTGAGCACTTTAGTCCTTACCCTGAACTTCCACGATGAAGAGCTGCCTTCTGATCCCACCCTTAATTTCGAAAACCTCAAGGTTTTGATTATAGCCAGTTGTAGACTAAAGGGTGTAATGCCAGAATGGTTGAGGCGGAGTTCGAAATTGCAGTTGTTGGATATGTCGTGGAACAGACTGGGCGGATCGATTCCGGATTGGTTTGGTGATTTTCAGCTTCTTTTTTACTTGGATTTATCGAACAATTCATTTACAGGAGAGATTCCACTAACCATAACTACACTGCCGAGCCTTATTAGTCGACAAATTTACTTCGAAGAACCTTCTCCGGATTTCCCATTTTTTATGAAAAGAAATGTTAGTGAACCATTGAAGTACACTCAAGTTTTGAGTTTTCCTCCCACCCTGGATCTTAGCAACAACAATCTGAGTGGACCAATCTGGCCGGATTTTGGGAATCTGAGAAAGCTCAGTGTCTTGGATCTGAAATTCAATAATCTTTCAGGAGAAATTCCGAGCTCTTTATCAGGGATGACTAGCCTGGAGACTTTAGATTTGTCGCATAATAAGCTTACCGGAACAATACCACAATCATTAGTGAGTCTGAGTTTCTTGTCTAAGTTCAGTGTTGCTTACAATCAGTTAAGTGGGGTAATTCCTTCAGGTGGTCAGTTTCAAACCTTCCCTAATTCAAGCTTTGAAGGAAATAATCTCTGTGGCGAACATGCTTCTCCTTGTCCGACAAATGATCAAAGCTCATTTACATCACCTGGAAGATCAAGATGGAGCCAAGGAAGTATCATTGGTATGGCCATCGGGATTTCATTTGGAACTGCTTTCCTTCTTGTTCTGCTGATTCTGATTGGGCTTTGGACTCGTAACAGAAGAAATGTAGATCTCGAAAGAGAGGTGGCTAACTCTAATGATAAGGATTTAGAGGAACTTGGATCAAAACTGGTAGTTTTGTTCCAAAACAAGGAGAACAATAAAGGACTTACCATAGACGATCTTTTGAAATTAACCGACAATTTCGACCAGGCAAACATAATCGGGTGCGGGGGTTTTGGCCTTGTTTACAGAGCCACCCTTCTTGATGGTAGGAGAGTTGCGATCAAGCGGCTCTCGGGTGATTGCGGACAGATAGAAAGAGAGTTTCGTGCAGAAGTTGAAACTCTCTCCAGAGCTCAGCATCCTAATCTTGTTCTTCTTCAGGGATATTGCATTTATAGAAACGACAGGCTTTTGATATATTCTTACATGGAGAATGGCAGTTTGGATTATTGGTTGCACGAAAAATTTGATGGCCCTTCTTGTCTAAGTTGGGAGATGAGGCTCCGAATTGCTCAAGGGGCTGCAAGGGGACTAGCTTACTTGCACCAATCATGTGAGCCGCATATCCTTCATCGAGACATCAAATCGAGCAACATCCTTTTAGACGAGAATTTCACTGCCCATTTGGCCGATTTTGGTCTCGCAAGGCTCATACTTCCTCACGATACACACGTGACGACTGATCTGGTTGGGACTTTGGGGTACATTCCACCCGAGTATGGGCAAGCCTCGGTTGCTACTTACAAGGGAGATGTCTATAGTTTTGGAGTCGTTCTTTTGGAACTTTTGACCGGAAAAAGGCCGATGGATATATGCAAGCCTAAAGAATGTCGGAATTTGATCTCTTGGGTGTTCCAAATGAAGAAGGAAGGCAAGGAAACCGAAGTTTACGATCCTTTCATTTACGAAAAGCATCACGGCAAGCAAATGTCGCGGGTTCTTGAAATAGCATGTCTTTGTCTAAACGAATATCCAAAAAGTCGCCCTTCGACGCAGCAGCTAGTTTCTTGGCTTGACAACATCATCTAG 3051 43.46 MILGDFWLVVLFFGVCFEAQLLHSQNLTCNSDDLQALEDIFEGMDSKINGWGTNVSTDCCVWPGITCNSSSTMGVNVTLGTGRVVKIDLGGKKLTGKLSDSIGRLEQLEHLNLSQNFLKSSLPSSLFQLPKLEVLDLSSNDLSGSIPATFNLPAIQLLDLSQNYLNGSLPPYLCHNSSRIRVLDLGFNYFSGSFPPGIGNCTFLETFSLETNDLTGDIPDDIFGLQKLTLLSLRDNLFSGQLNELIGNLPNLVRLDIAYNRFSGEIPDVFYTSKNLQFLVLESNNFTGQIPNSLSSSPTVNLLNLRNNSLTGPIDINCSAMANLTSLDLGTNWFYGPVPSNLPACQRLKNINLARNNFIGDIPETFKTFQSLSYLSLSNSSIVNLHSALDILQHCKNLSTLVLTLNFHDEELPSDPTLNFENLKVLIIASCRLKGVMPEWLRRSSKLQLLDMSWNRLGGSIPDWFGDFQLLFYLDLSNNSFTGEIPLTITTLPSLISRQIYFEEPSPDFPFFMKRNVSEPLKYTQVLSFPPTLDLSNNNLSGPIWPDFGNLRKLSVLDLKFNNLSGEIPSSLSGMTSLETLDLSHNKLTGTIPQSLVSLSFLSKFSVAYNQLSGVIPSGGQFQTFPNSSFEGNNLCGEHASPCPTNDQSSFTSPGRSRWSQGSIIGMAIGISFGTAFLLVLLILIGLWTRNRRNVDLEREVANSNDKDLEELGSKLVVLFQNKENNKGLTIDDLLKLTDNFDQANIIGCGGFGLVYRATLLDGRRVAIKRLSGDCGQIEREFRAEVETLSRAQHPNLVLLQGYCIYRNDRLLIYSYMENGSLDYWLHEKFDGPSCLSWEMRLRIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDENFTAHLADFGLARLILPHDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDICKPKECRNLISWVFQMKKEGKETEVYDPFIYEKHHGKQMSRVLEIACLCLNEYPKSRPSTQQLVSWLDNII 1016
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 45700097 45703147 + Bda015870.1 Bda10g01169 15057
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda10g01169 1016 CDD STKc_IRAK 747 1015 - -
Bda10g01169 1016 Gene3D Ribonuclease Inhibitor 316 647 IPR032675 -
Bda10g01169 1016 PANTHER OSJNBB0004A17.8 PROTEIN 84 174 - -
Bda10g01169 1016 SMART serkin_6 741 1012 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda10g01169 1016 SUPERFAMILY L domain-like 222 633 - -
Bda10g01169 1016 PRINTS Leucine-rich repeat signature 132 145 - -
Bda10g01169 1016 PRINTS Leucine-rich repeat signature 575 588 - -
Bda10g01169 1016 ProSiteProfiles Leucine-rich repeat profile. 131 153 IPR001611 GO:0005515
Bda10g01169 1016 SUPERFAMILY L domain-like 54 316 - -
Bda10g01169 1016 ProSitePatterns Serine/Threonine protein kinases active-site signature. 863 875 IPR008271 GO:0004672|GO:0006468
Bda10g01169 1016 PANTHER RECEPTOR-LIKE PROTEIN 55 176 1015 - -
Bda10g01169 1016 PANTHER RECEPTOR-LIKE PROTEIN 55 11 102 - -
Bda10g01169 1016 Gene3D Ribonuclease Inhibitor 30 177 IPR032675 -
Bda10g01169 1016 Gene3D Phosphorylase Kinase; domain 1 701 816 - -
Bda10g01169 1016 ProSiteProfiles Leucine-rich repeat profile. 577 600 IPR001611 GO:0005515
Bda10g01169 1016 Pfam Leucine rich repeat N-terminal domain 31 68 IPR013210 -
Bda10g01169 1016 PANTHER RECEPTOR-LIKE PROTEIN 55 84 174 - -
Bda10g01169 1016 Gene3D Ribonuclease Inhibitor 178 270 IPR032675 -
Bda10g01169 1016 ProSiteProfiles Protein kinase domain profile. 741 1016 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda10g01169 1016 Pfam Protein kinase domain 743 1010 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda10g01169 1016 Pfam Leucine rich repeat 86 142 IPR001611 GO:0005515
Bda10g01169 1016 Pfam Leucine rich repeat 552 612 IPR001611 GO:0005515
Bda10g01169 1016 Pfam Leucine rich repeat 422 480 IPR001611 GO:0005515
Bda10g01169 1016 Gene3D Transferase(Phosphotransferase) domain 1 817 1015 - -
Bda10g01169 1016 SMART LRR_typ_2 152 176 IPR003591 -
Bda10g01169 1016 SMART LRR_typ_2 575 599 IPR003591 -
Bda10g01169 1016 SMART LRR_typ_2 249 273 IPR003591 -
Bda10g01169 1016 SMART LRR_typ_2 105 129 IPR003591 -
Bda10g01169 1016 SMART LRR_typ_2 321 345 IPR003591 -
Bda10g01169 1016 SMART LRR_typ_2 551 574 IPR003591 -
Bda10g01169 1016 ProSitePatterns Protein kinases ATP-binding region signature. 747 769 IPR017441 GO:0005524
Bda10g01169 1016 PANTHER OSJNBB0004A17.8 PROTEIN 176 1015 - -
Bda10g01169 1016 PANTHER OSJNBB0004A17.8 PROTEIN 11 102 - -
Bda10g01169 1016 SUPERFAMILY Protein kinase-like (PK-like) 725 1012 IPR011009 -
Bda10g01169 1016 Gene3D Ribonuclease Inhibitor 271 315 IPR032675 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda10g01169 Bda-Chr10:45700097 Bda12g00552 Bda-Chr12:9114461 0 dispersed
Bda10g01169 Bda-Chr10:45700097 Bda11g01541 Bda-Chr11:47731550 2.33E-137 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69883 PF00069 Pkinase 1.20E-43 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda10g01169 - - cit:102619276 1395.56