Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda10g01169 | ATGATTCTTGGGGACTTCTGGCTTGTCGTCCTCTTTTTCGGAGTCTGCTTCGAAGCTCAGCTCCTGCATTCTCAAAACCTAACCTGCAATTCAGATGATTTGCAGGCGTTGGAAGATATCTTCGAGGGTATGGACTCTAAAATTAACGGCTGGGGCACTAACGTTTCGACTGATTGCTGCGTCTGGCCTGGAATCACTTGCAATTCTTCGTCGACTATGGGGGTTAACGTTACTTTAGGGACTGGTAGAGTTGTGAAGATCGACCTTGGTGGAAAGAAGCTAACGGGGAAACTTTCTGACTCCATTGGCCGGCTGGAGCAGCTTGAACATCTCAATCTCTCTCAAAATTTTCTAAAGAGTTCGCTTCCTTCTTCGTTGTTCCAGCTGCCTAAATTGGAGGTACTCGACCTAAGTTCCAATGATTTATCCGGGTCTATTCCGGCGACCTTCAATCTACCTGCGATTCAGCTGCTTGATTTGTCTCAGAACTACTTGAATGGCTCTCTCCCACCTTATTTATGCCATAACTCTTCCAGAATTAGGGTGTTGGATCTGGGTTTCAACTATTTCTCCGGCAGTTTTCCTCCTGGTATTGGCAACTGCACCTTCTTAGAAACCTTCTCTCTGGAGACTAATGACCTCACCGGCGACATTCCCGACGACATATTCGGGCTGCAAAAATTGACCTTGTTGAGCCTCCGAGACAACCTGTTTTCAGGACAGCTGAACGAGCTGATTGGTAATCTCCCAAATCTTGTTCGCCTGGATATTGCTTACAATAGATTTTCAGGAGAAATTCCAGATGTTTTTTACACCTCCAAAAATTTGCAGTTCTTAGTGTTGGAATCTAACAATTTCACTGGTCAAATACCGAATTCGTTATCTAGTTCTCCGACGGTAAATCTCCTAAACTTGAGGAACAATTCTTTAACGGGTCCTATCGATATTAACTGTTCAGCCATGGCTAACCTGACCTCTCTTGATTTGGGAACTAATTGGTTTTACGGTCCTGTTCCAAGCAATCTTCCGGCTTGTCAACGGCTAAAAAACATAAATCTAGCCCGAAATAACTTCATCGGAGATATCCCTGAAACCTTCAAGACTTTTCAGAGCCTTTCTTATCTTTCACTGTCCAATTCAAGCATAGTCAATCTCCACTCTGCACTTGACATCTTGCAGCACTGCAAGAACTTGAGCACTTTAGTCCTTACCCTGAACTTCCACGATGAAGAGCTGCCTTCTGATCCCACCCTTAATTTCGAAAACCTCAAGGTTTTGATTATAGCCAGTTGTAGACTAAAGGGTGTAATGCCAGAATGGTTGAGGCGGAGTTCGAAATTGCAGTTGTTGGATATGTCGTGGAACAGACTGGGCGGATCGATTCCGGATTGGTTTGGTGATTTTCAGCTTCTTTTTTACTTGGATTTATCGAACAATTCATTTACAGGAGAGATTCCACTAACCATAACTACACTGCCGAGCCTTATTAGTCGACAAATTTACTTCGAAGAACCTTCTCCGGATTTCCCATTTTTTATGAAAAGAAATGTTAGTGAACCATTGAAGTACACTCAAGTTTTGAGTTTTCCTCCCACCCTGGATCTTAGCAACAACAATCTGAGTGGACCAATCTGGCCGGATTTTGGGAATCTGAGAAAGCTCAGTGTCTTGGATCTGAAATTCAATAATCTTTCAGGAGAAATTCCGAGCTCTTTATCAGGGATGACTAGCCTGGAGACTTTAGATTTGTCGCATAATAAGCTTACCGGAACAATACCACAATCATTAGTGAGTCTGAGTTTCTTGTCTAAGTTCAGTGTTGCTTACAATCAGTTAAGTGGGGTAATTCCTTCAGGTGGTCAGTTTCAAACCTTCCCTAATTCAAGCTTTGAAGGAAATAATCTCTGTGGCGAACATGCTTCTCCTTGTCCGACAAATGATCAAAGCTCATTTACATCACCTGGAAGATCAAGATGGAGCCAAGGAAGTATCATTGGTATGGCCATCGGGATTTCATTTGGAACTGCTTTCCTTCTTGTTCTGCTGATTCTGATTGGGCTTTGGACTCGTAACAGAAGAAATGTAGATCTCGAAAGAGAGGTGGCTAACTCTAATGATAAGGATTTAGAGGAACTTGGATCAAAACTGGTAGTTTTGTTCCAAAACAAGGAGAACAATAAAGGACTTACCATAGACGATCTTTTGAAATTAACCGACAATTTCGACCAGGCAAACATAATCGGGTGCGGGGGTTTTGGCCTTGTTTACAGAGCCACCCTTCTTGATGGTAGGAGAGTTGCGATCAAGCGGCTCTCGGGTGATTGCGGACAGATAGAAAGAGAGTTTCGTGCAGAAGTTGAAACTCTCTCCAGAGCTCAGCATCCTAATCTTGTTCTTCTTCAGGGATATTGCATTTATAGAAACGACAGGCTTTTGATATATTCTTACATGGAGAATGGCAGTTTGGATTATTGGTTGCACGAAAAATTTGATGGCCCTTCTTGTCTAAGTTGGGAGATGAGGCTCCGAATTGCTCAAGGGGCTGCAAGGGGACTAGCTTACTTGCACCAATCATGTGAGCCGCATATCCTTCATCGAGACATCAAATCGAGCAACATCCTTTTAGACGAGAATTTCACTGCCCATTTGGCCGATTTTGGTCTCGCAAGGCTCATACTTCCTCACGATACACACGTGACGACTGATCTGGTTGGGACTTTGGGGTACATTCCACCCGAGTATGGGCAAGCCTCGGTTGCTACTTACAAGGGAGATGTCTATAGTTTTGGAGTCGTTCTTTTGGAACTTTTGACCGGAAAAAGGCCGATGGATATATGCAAGCCTAAAGAATGTCGGAATTTGATCTCTTGGGTGTTCCAAATGAAGAAGGAAGGCAAGGAAACCGAAGTTTACGATCCTTTCATTTACGAAAAGCATCACGGCAAGCAAATGTCGCGGGTTCTTGAAATAGCATGTCTTTGTCTAAACGAATATCCAAAAAGTCGCCCTTCGACGCAGCAGCTAGTTTCTTGGCTTGACAACATCATCTAG | 3051 | 43.46 | MILGDFWLVVLFFGVCFEAQLLHSQNLTCNSDDLQALEDIFEGMDSKINGWGTNVSTDCCVWPGITCNSSSTMGVNVTLGTGRVVKIDLGGKKLTGKLSDSIGRLEQLEHLNLSQNFLKSSLPSSLFQLPKLEVLDLSSNDLSGSIPATFNLPAIQLLDLSQNYLNGSLPPYLCHNSSRIRVLDLGFNYFSGSFPPGIGNCTFLETFSLETNDLTGDIPDDIFGLQKLTLLSLRDNLFSGQLNELIGNLPNLVRLDIAYNRFSGEIPDVFYTSKNLQFLVLESNNFTGQIPNSLSSSPTVNLLNLRNNSLTGPIDINCSAMANLTSLDLGTNWFYGPVPSNLPACQRLKNINLARNNFIGDIPETFKTFQSLSYLSLSNSSIVNLHSALDILQHCKNLSTLVLTLNFHDEELPSDPTLNFENLKVLIIASCRLKGVMPEWLRRSSKLQLLDMSWNRLGGSIPDWFGDFQLLFYLDLSNNSFTGEIPLTITTLPSLISRQIYFEEPSPDFPFFMKRNVSEPLKYTQVLSFPPTLDLSNNNLSGPIWPDFGNLRKLSVLDLKFNNLSGEIPSSLSGMTSLETLDLSHNKLTGTIPQSLVSLSFLSKFSVAYNQLSGVIPSGGQFQTFPNSSFEGNNLCGEHASPCPTNDQSSFTSPGRSRWSQGSIIGMAIGISFGTAFLLVLLILIGLWTRNRRNVDLEREVANSNDKDLEELGSKLVVLFQNKENNKGLTIDDLLKLTDNFDQANIIGCGGFGLVYRATLLDGRRVAIKRLSGDCGQIEREFRAEVETLSRAQHPNLVLLQGYCIYRNDRLLIYSYMENGSLDYWLHEKFDGPSCLSWEMRLRIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDENFTAHLADFGLARLILPHDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDICKPKECRNLISWVFQMKKEGKETEVYDPFIYEKHHGKQMSRVLEIACLCLNEYPKSRPSTQQLVSWLDNII | 1016 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 45700097 | 45703147 | + | Bda015870.1 | Bda10g01169 | 15057 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda10g01169 | 1016 | CDD | STKc_IRAK | 747 | 1015 | - | - | |
Bda10g01169 | 1016 | Gene3D | Ribonuclease Inhibitor | 316 | 647 | IPR032675 | - | |
Bda10g01169 | 1016 | PANTHER | OSJNBB0004A17.8 PROTEIN | 84 | 174 | - | - | |
Bda10g01169 | 1016 | SMART | serkin_6 | 741 | 1012 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda10g01169 | 1016 | SUPERFAMILY | L domain-like | 222 | 633 | - | - | |
Bda10g01169 | 1016 | PRINTS | Leucine-rich repeat signature | 132 | 145 | - | - | |
Bda10g01169 | 1016 | PRINTS | Leucine-rich repeat signature | 575 | 588 | - | - | |
Bda10g01169 | 1016 | ProSiteProfiles | Leucine-rich repeat profile. | 131 | 153 | IPR001611 | GO:0005515 | |
Bda10g01169 | 1016 | SUPERFAMILY | L domain-like | 54 | 316 | - | - | |
Bda10g01169 | 1016 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 863 | 875 | IPR008271 | GO:0004672|GO:0006468 | |
Bda10g01169 | 1016 | PANTHER | RECEPTOR-LIKE PROTEIN 55 | 176 | 1015 | - | - | |
Bda10g01169 | 1016 | PANTHER | RECEPTOR-LIKE PROTEIN 55 | 11 | 102 | - | - | |
Bda10g01169 | 1016 | Gene3D | Ribonuclease Inhibitor | 30 | 177 | IPR032675 | - | |
Bda10g01169 | 1016 | Gene3D | Phosphorylase Kinase; domain 1 | 701 | 816 | - | - | |
Bda10g01169 | 1016 | ProSiteProfiles | Leucine-rich repeat profile. | 577 | 600 | IPR001611 | GO:0005515 | |
Bda10g01169 | 1016 | Pfam | Leucine rich repeat N-terminal domain | 31 | 68 | IPR013210 | - | |
Bda10g01169 | 1016 | PANTHER | RECEPTOR-LIKE PROTEIN 55 | 84 | 174 | - | - | |
Bda10g01169 | 1016 | Gene3D | Ribonuclease Inhibitor | 178 | 270 | IPR032675 | - | |
Bda10g01169 | 1016 | ProSiteProfiles | Protein kinase domain profile. | 741 | 1016 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda10g01169 | 1016 | Pfam | Protein kinase domain | 743 | 1010 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda10g01169 | 1016 | Pfam | Leucine rich repeat | 86 | 142 | IPR001611 | GO:0005515 | |
Bda10g01169 | 1016 | Pfam | Leucine rich repeat | 552 | 612 | IPR001611 | GO:0005515 | |
Bda10g01169 | 1016 | Pfam | Leucine rich repeat | 422 | 480 | IPR001611 | GO:0005515 | |
Bda10g01169 | 1016 | Gene3D | Transferase(Phosphotransferase) domain 1 | 817 | 1015 | - | - | |
Bda10g01169 | 1016 | SMART | LRR_typ_2 | 152 | 176 | IPR003591 | - | |
Bda10g01169 | 1016 | SMART | LRR_typ_2 | 575 | 599 | IPR003591 | - | |
Bda10g01169 | 1016 | SMART | LRR_typ_2 | 249 | 273 | IPR003591 | - | |
Bda10g01169 | 1016 | SMART | LRR_typ_2 | 105 | 129 | IPR003591 | - | |
Bda10g01169 | 1016 | SMART | LRR_typ_2 | 321 | 345 | IPR003591 | - | |
Bda10g01169 | 1016 | SMART | LRR_typ_2 | 551 | 574 | IPR003591 | - | |
Bda10g01169 | 1016 | ProSitePatterns | Protein kinases ATP-binding region signature. | 747 | 769 | IPR017441 | GO:0005524 | |
Bda10g01169 | 1016 | PANTHER | OSJNBB0004A17.8 PROTEIN | 176 | 1015 | - | - | |
Bda10g01169 | 1016 | PANTHER | OSJNBB0004A17.8 PROTEIN | 11 | 102 | - | - | |
Bda10g01169 | 1016 | SUPERFAMILY | Protein kinase-like (PK-like) | 725 | 1012 | IPR011009 | - | |
Bda10g01169 | 1016 | Gene3D | Ribonuclease Inhibitor | 271 | 315 | IPR032675 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda10g01169 | Bda-Chr10:45700097 | Bda12g00552 | Bda-Chr12:9114461 | 0 | dispersed | |
Bda10g01169 | Bda-Chr10:45700097 | Bda11g01541 | Bda-Chr11:47731550 | 2.33E-137 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
69883 | PF00069 | Pkinase | 1.20E-43 | CL0016 | Bda | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda10g01169 | - | - | cit:102619276 | 1395.56 |