Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda10g01180 | ATGGAAACTTTTCAAGGCCTTCTCAAAATTAGGGTTCAAAGAGGAGTTAATCTGGCTGTTCGTGATGTTCGAACTCGCACCAGTGATCCATACGTTGTCATTTCCATGGCTCAACAGGCTTGTTCCTTTTTTATTTTATCAAGATTGACGACTCGGGTGGTGAAGAAGAACTGCAATCCCGTTTGGAATGAGGATTTCACTATTTCCATTTCAAATCTCAATACTCCAATAACCCTAACAGTGTATGACAAAGACAAGTTCACAGAAGATGATAAAATGGGTGATGCAGAGATTGACATCAAACCCTACATAGAATGTCTTAAAATGGGTTTGAAGAATCTACCAAATGGGTGCGCTGTTAAGAGAATTCAGCCGGACCGCTTGAACTGCCTCTCCGACGAGAGCTCGTGTGTTTGGAACGACGGAAAAATTGTTCAGGACATGCCTCTCCGGTTAAAGAATGTTGAGTGTGGGGAAGTTATGATTCAGATTGAGTTGATCGTTGGTCCTGAATCTAAACGTTATTTGGCCATTAAAGACTAG | 543 | 41.62 | METFQGLLKIRVQRGVNLAVRDVRTRTSDPYVVISMAQQACSFFILSRLTTRVVKKNCNPVWNEDFTISISNLNTPITLTVYDKDKFTEDDKMGDAEIDIKPYIECLKMGLKNLPNGCAVKRIQPDRLNCLSDESSCVWNDGKIVQDMPLRLKNVECGEVMIQIELIVGPESKRYLAIKD | 180 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 45767572 | 45768458 | - | Bda015881.1 | Bda10g01180 | 15068 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda10g01180 | 180 | Pfam | C2 domain | 7 | 102 | IPR000008 | - | |
Bda10g01180 | 180 | PANTHER | PROTEIN C2-DOMAIN ABA-RELATED 10 | 1 | 171 | - | - | |
Bda10g01180 | 180 | Gene3D | C2 domain | 2 | 175 | IPR035892 | - | |
Bda10g01180 | 180 | SMART | C2_3c | 7 | 112 | IPR000008 | - | |
Bda10g01180 | 180 | PRINTS | C2 domain signature | 77 | 85 | IPR000008 | - | |
Bda10g01180 | 180 | PRINTS | C2 domain signature | 56 | 69 | IPR000008 | - | |
Bda10g01180 | 180 | PRINTS | C2 domain signature | 24 | 36 | IPR000008 | - | |
Bda10g01180 | 180 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 4 | 105 | IPR035892 | - | |
Bda10g01180 | 180 | PANTHER | PROTEIN C2-DOMAIN ABA-RELATED 4 | 1 | 171 | IPR044562 | - | |
Bda10g01180 | 180 | ProSiteProfiles | C2 domain profile. | 1 | 116 | IPR000008 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda10g01180 | Bda-Chr10:45767572 | Bda14g00936 | Bda-Chr14:7438576 | 1.68E-65 | dispersed | |
Bda10g01180 | Bda-Chr10:45767572 | Bda01g01821 | Bda-Chr1:54362365 | 1.58E-70 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda10g01180 | - | - | zju:107429323 | 242.276 |