Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda10g01180 ATGGAAACTTTTCAAGGCCTTCTCAAAATTAGGGTTCAAAGAGGAGTTAATCTGGCTGTTCGTGATGTTCGAACTCGCACCAGTGATCCATACGTTGTCATTTCCATGGCTCAACAGGCTTGTTCCTTTTTTATTTTATCAAGATTGACGACTCGGGTGGTGAAGAAGAACTGCAATCCCGTTTGGAATGAGGATTTCACTATTTCCATTTCAAATCTCAATACTCCAATAACCCTAACAGTGTATGACAAAGACAAGTTCACAGAAGATGATAAAATGGGTGATGCAGAGATTGACATCAAACCCTACATAGAATGTCTTAAAATGGGTTTGAAGAATCTACCAAATGGGTGCGCTGTTAAGAGAATTCAGCCGGACCGCTTGAACTGCCTCTCCGACGAGAGCTCGTGTGTTTGGAACGACGGAAAAATTGTTCAGGACATGCCTCTCCGGTTAAAGAATGTTGAGTGTGGGGAAGTTATGATTCAGATTGAGTTGATCGTTGGTCCTGAATCTAAACGTTATTTGGCCATTAAAGACTAG 543 41.62 METFQGLLKIRVQRGVNLAVRDVRTRTSDPYVVISMAQQACSFFILSRLTTRVVKKNCNPVWNEDFTISISNLNTPITLTVYDKDKFTEDDKMGDAEIDIKPYIECLKMGLKNLPNGCAVKRIQPDRLNCLSDESSCVWNDGKIVQDMPLRLKNVECGEVMIQIELIVGPESKRYLAIKD 180
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 45767572 45768458 - Bda015881.1 Bda10g01180 15068
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda10g01180 180 Pfam C2 domain 7 102 IPR000008 -
Bda10g01180 180 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 10 1 171 - -
Bda10g01180 180 Gene3D C2 domain 2 175 IPR035892 -
Bda10g01180 180 SMART C2_3c 7 112 IPR000008 -
Bda10g01180 180 PRINTS C2 domain signature 77 85 IPR000008 -
Bda10g01180 180 PRINTS C2 domain signature 56 69 IPR000008 -
Bda10g01180 180 PRINTS C2 domain signature 24 36 IPR000008 -
Bda10g01180 180 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 4 105 IPR035892 -
Bda10g01180 180 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 1 171 IPR044562 -
Bda10g01180 180 ProSiteProfiles C2 domain profile. 1 116 IPR000008 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda10g01180 Bda-Chr10:45767572 Bda14g00936 Bda-Chr14:7438576 1.68E-65 dispersed
Bda10g01180 Bda-Chr10:45767572 Bda01g01821 Bda-Chr1:54362365 1.58E-70 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda10g01180 - - zju:107429323 242.276