Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda10g01195 ATGGAGGTTCATCAGGTTTTGGCGCCACCCCATAAAACGGCCATGCAAAAGCTGAAGAACAGGCTGAAAGAGACCTTCTTCTCCGACGACCCTCTCCGTCAGTTTAAAGGGCAGCCTACGAAAAGGAAGTGGATTCTTGCAGCTCAGTATTTCTTCCCTATTCTTCAATGGGGTCCTGCCTACACTCTCAAGCTTTTCAAATCCGACATTGTTTCTGGCCTTACAATTGCTAGTTTAGCCATTCCTCAGGGCATCAGTTATGCCAAGCTGGCAAATCTTCCTCCAATCGTGGGTCTCTATTCAAGCTTTGTTCCTCCTCTGGTATATGCTGTTCTTGGTAGCTCGAGGGATCTGGCAGTAGGCCCAGTTTCCATTGCTTCGCTCATACTTGGATCAATGTTGAGGCAAGAAGTTTCTCCAACTAAAGACCCTCTTCTCTTTCTTCAGCTTGCTCTCACTTCCACTCTCTTTGCTGGCCTCTTCCAAGCTTCGTTGGGTTTTTTAAGGCTTGGATTTATAATTGATTTTCTGTCAAAGGCGACGCTGATTGGGTTCATGGGAGGAGCCGCCATTATTGTGTCTCTGCAACAGCTTAAAAGCCTGCTGGGGATCCAGCATTTCACAAAGCAGATGGGTTTAATTCCTGTCTTGACCTCCGTCTTTCATCATACCAACGAGTGGTTGTGTGTGCAGTGGTCATGGCAGACTATAGTGATGGGAGGGTGCTTCCTCTTTTTACTGCTTCTCACCAGACACATTAGCATGAAAAGGCCGAAGCTGTTCTGGGTGTCAGCCGGAGCCCCTCTTGTCTCTGTCATTCTCTCCACCATCCTCGTTTTCGCTTTCAAAGCTAACACCCATGGGATCAGCATTATCGGAAAATTGCAAGAAGGCCTCAATCCTCCCTCCTTGAATATGCTGGACTTTAAAGGCGAGTATTTAGGGCTTGTATTGAAGACTGGCCTCGTCACTGGCATCATTTCTCTCACTGAAGGAATTGCAGTTGGGCGGACTTTTGCTGCTATAAAGGACTATCGAGTTGATGGAAACAAAGAGATGATAGCTATTGGCCTCATGAACGTGGTTGGCTCATTTACTTCTTGTTATGTAACGACAGGTGCCTTTTCAAGGTCAGCTGTGAATCACAATGCTGGCGCCAAAACTGCGGTATCTAACATCGTAATGTCTGTTACGGTTATGGTGACACTTCTCTTCTTAATGCCCCTATTTCAATATACGCCAAATCTTGTATTGGCTGCAATTATTGTTACAGCTGTGGTTGGCCTCATTGATGTACCTGCCGCTTATAGCATTTGGAAGATTGACAAATTCGATTTTGTTGTAATGTTATGTGCATTCCTTGGAGTTCTTTTGATCTCTGTCCAAAATGGCCTGGCTATTGCTGTTGGTTTGTCCATTTTGAAGATCATCCTCCAAGTAACCAGGCCAAAAACAATGATGCTGGGTAACATTCCCGGGACAGATATATATCGTAATATTCACCATTACAAGGAAGCCCTGAGAGTTCCTGGCTTTCTTATTTTATGCATTGAAGCTCCAATCAACTTTGCTAACACCACATATCTCAATGAAAGGATATTGAGATGGATAGAAGAATATGAAGCAGAAGATGACAATATTAAACAGGCATCAAGCCTTCACTTTCTCATACTAGAAATGTCAGCTGTGAGTGCCATAGACACAAGTGGAGTTACACTTTTCAAAGACTTGAGGAGATCTATGGAAAAGAAGGGCCTTGTATTGGTGAATCCAGTGGGAGAGGTTATGGAGAAGTTAATAAAAGCAGACGATGGCAGAGAATTTATGAGGCCAAATAATCTGTACTTGACAGTTGGAGAGGCAGTGGCTTTTCTCTCGACGACAATCAAAAGACAACCATAA 1902 44.22 MEVHQVLAPPHKTAMQKLKNRLKETFFSDDPLRQFKGQPTKRKWILAAQYFFPILQWGPAYTLKLFKSDIVSGLTIASLAIPQGISYAKLANLPPIVGLYSSFVPPLVYAVLGSSRDLAVGPVSIASLILGSMLRQEVSPTKDPLLFLQLALTSTLFAGLFQASLGFLRLGFIIDFLSKATLIGFMGGAAIIVSLQQLKSLLGIQHFTKQMGLIPVLTSVFHHTNEWLCVQWSWQTIVMGGCFLFLLLLTRHISMKRPKLFWVSAGAPLVSVILSTILVFAFKANTHGISIIGKLQEGLNPPSLNMLDFKGEYLGLVLKTGLVTGIISLTEGIAVGRTFAAIKDYRVDGNKEMIAIGLMNVVGSFTSCYVTTGAFSRSAVNHNAGAKTAVSNIVMSVTVMVTLLFLMPLFQYTPNLVLAAIIVTAVVGLIDVPAAYSIWKIDKFDFVVMLCAFLGVLLISVQNGLAIAVGLSILKIILQVTRPKTMMLGNIPGTDIYRNIHHYKEALRVPGFLILCIEAPINFANTTYLNERILRWIEEYEAEDDNIKQASSLHFLILEMSAVSAIDTSGVTLFKDLRRSMEKKGLVLVNPVGEVMEKLIKADDGREFMRPNNLYLTVGEAVAFLSTTIKRQP 633
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 45942382 45946943 - Bda015903.1 Bda10g01195 15083
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda10g01195 633 TIGRFAM sulP: sulfate permease 53 599 IPR001902 GO:0015301|GO:0016020|GO:0055085
Bda10g01195 633 Gene3D STAS domain 482 628 IPR036513 -
Bda10g01195 633 ProSitePatterns SLC26A transporters signature. 95 116 IPR018045 GO:0008271|GO:0008272
Bda10g01195 633 SUPERFAMILY SpoIIaa-like 507 625 IPR036513 -
Bda10g01195 633 Pfam STAS domain 503 621 IPR002645 -
Bda10g01195 633 PANTHER SULFATE TRANSPORTER 2 627 IPR001902 GO:0015301|GO:0016020|GO:0055085
Bda10g01195 633 CDD STAS_SulP_like_sulfate_transporter 503 617 - -
Bda10g01195 633 ProSiteProfiles STAS domain profile. 502 625 IPR002645 -
Bda10g01195 633 Pfam Sulfate permease family 66 451 IPR011547 GO:0016021
Bda10g01195 633 PANTHER BNAA09G30120D PROTEIN 2 627 IPR030313 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g00872 Bda-Chr3:7564021 Bda10g01195 Bda-Chr10:45942382 0 dispersed
Bda10g00103 Bda-Chr10:2537503 Bda10g01195 Bda-Chr10:45942382 2.58E-114 dispersed
Bda10g00803 Bda-Chr10:42423540 Bda10g01195 Bda-Chr10:45942382 4.39E-166 dispersed
Bda10g01195 Bda-Chr10:45942382 Bda12g00009 Bda-Chr12:68625 0 dispersed
Bda10g01195 Bda-Chr10:45942382 Bda04g00854 Bda-Chr4:58397111 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda10g01195 K17471 - csv:101219163 1014.6