Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bda10g01198 ATGGAAGCCTCGCCGACGTCCACGACGGCGCCGGAACCGCATGCCCCGCTTTTACGGCCTCGCCAGCCCTCCACCTCTGAAGGTACCAGCTCCCCCGCCCGACCATCCACTCTCGCTTTTCTACTTGGTCGAGCCACCGGCCATCGCGGTCCCTCCATGTTGGTCCGGGAGACTGCGGCTCGGCAGCTCGACGAGCGACGGGTCGACTGGGGCTATTCCAAACCGGTGGTGGTGCTCGATATCATGTGGAACGCGGCTTTTGTTGTTGTGACTGTGGTTATGTTGATTTGCACAACCAAAGAGCACGCTGACACGCCGCTTCGGCTATGGATCTGTGGGTACGCTTTGCAGTGTGTGATTCACGTTGTCCTGGTGTGGTTAGAGTATAGGAGGAGGAGTGTGAGGCGAGTTAGGGATTTGGAGCGGGAGCAGCAGGGAGGAGATGCTACGAATGAAAGCGAGGATGAGGATTCTGGACAGAGGGGTTTGGCTAGTTTGAACCATGTCAACAAACGATGTGAATCAGTAAACACGATGGCATCATTTCTCTGGTGGATAGTTGGCTTCTATTGGGTTGTCTCCGGCGGTGATGCTCTTCTGCGAAAAGCTCCTTATTTGTATTGGTTGGCTGTTGTCTTTCTGGCATTTGATGTGTTTTTTGCCATCTTTTGTGTTGTTTTGGCATGTTTGATTGGGATTGCTCTTTGTTGCTGCTTGCCTTGCATCATTGCCATTCTCTACACCGTTGCAGGACAGGAAGGTGCATCGGAAGCAGATCTTAGTATCCTCCCAAAATACAGATTTCAAGCGTTCAATGACGAAGAGAAGGCCAATGTGGGGGTTGGTTTGATGGTTCCTGGAGAAACAAGCAGTGGATACTTGGCGACCGAGAAAACACTTTTATCTGAAGATGCAGAGTGTTGTATATGTTTGAGTTCATATGAGGATGGAGCAGAGCTCAATGCTCTTCCCTGTAGCCACCATTTCCACTCTGCATGTATCATAAAATGGCTGAAGATGAATGCTACATGTCCTCTTTGCAAATACAACATTCTCAAAGGCTGTGAGCAAGTGTAA 1077 50.51 MEASPTSTTAPEPHAPLLRPRQPSTSEGTSSPARPSTLAFLLGRATGHRGPSMLVRETAARQLDERRVDWGYSKPVVVLDIMWNAAFVVVTVVMLICTTKEHADTPLRLWICGYALQCVIHVVLVWLEYRRRSVRRVRDLEREQQGGDATNESEDEDSGQRGLASLNHVNKRCESVNTMASFLWWIVGFYWVVSGGDALLRKAPYLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYTVAGQEGASEADLSILPKYRFQAFNDEEKANVGVGLMVPGETSSGYLATEKTLLSEDAECCICLSSYEDGAELNALPCSHHFHSACIIKWLKMNATCPLCKYNILKGCEQV 358
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
10 45980959 45984066 - Bda015906.1 Bda10g01198 15086
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bda10g01198 358 PANTHER TARGET OF ERK KINASE MPK-1 12 355 - -
Bda10g01198 358 SUPERFAMILY RING/U-box 295 352 - -
Bda10g01198 358 MobiDBLite consensus disorder prediction 1 35 - -
Bda10g01198 358 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 290 354 IPR013083 -
Bda10g01198 358 SMART ring_2 307 347 IPR001841 -
Bda10g01198 358 PANTHER E3 UBIQUITIN PROTEIN LIGASE RIE1-LIKE 12 355 - -
Bda10g01198 358 Pfam Ring finger domain 306 348 IPR001841 -
Bda10g01198 358 ProSiteProfiles Zinc finger RING-type profile. 307 348 IPR001841 -
Bda10g01198 358 CDD RING-H2_PA-TM-RING 306 348 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda07g01752 Bda-Chr7:32975913 Bda10g01198 Bda-Chr10:45980959 0 dispersed
Bda10g01198 Bda-Chr10:45980959 Bda13g00332 Bda-Chr13:4176181 8.37E-112 dispersed
Bda11g01823 Bda-Chr11:53472840 Bda10g01198 Bda-Chr10:45980959 1.87E-10 dispersed
Bda10g01198 Bda-Chr10:45980959 Bda08g00529 Bda-Chr8:5286865 1.26E-106 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda10g01198 - K13148 tcc:18609876 518.85