Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda11g00014 ATGCTCTCAAGATCCTCTTTAACCTCATTTAATCTAACGTCATTTGATGATTTTCCGGCTCTGAATCGGATTCCAAGAGTAATGACGGTTTCCGGTGTTTTATCCCGATTCGAAGCCGAAGAAGACGACGATTCCAGCGAGAGATTATCGTCGCCGGAGCGGCGGATCGTCGTTTCGAACCAGTTGCCGATTCGAGCTCGTCGGGATGTGGAAACTGGAAAATGGGAGTTTGAGTTTGATTCCGATAGCCTGGTTTTGCAGCTAAAAGATGGGTTTTCTTCGCAGGTAGAGGTGATGTACGTCGGCTCTCTCACCGCCGATATCGACGTTTCCGACCAAGATCGGGTTTCTCAACTTCTCCTTGCGAAATTCCGCTGTGTTCCGACGTTCTTACCATCGGAAATTCAAAATATGTTCTATCATGGGTTTTGCAAGCATTATCTATGGCCTCTGTTTCACTACATGTTACCTTTATCTCCGGGGAACGGCGACCAATTCAACAGGGAAAATTGGCAAGCTTACGTATCGGCGAACAAGGTTTTCGCCGACAAAATCATGGAGGTGATTAACCCGGAAGATGATTACGTCTGGATTCATGACTATCATCTAATGATTTTGCCAACCTTTTTGAGGAGAAGGTTTCACCGGATTAAGCTCGGATTCTTCTTGCACAGTCCGTTTCCATCGTCGGAAATTTACCGATCTCTTCCGGTCCGAGAGGAGATCTTGCGGGGCCTTTTGAACTCCGATCTGATAGGGTTTCACACTTTCGATTACGCCAGGCATTTTCTCTCTTGTTGCAGTAGAATGTTGGGTCTTGATTATGAATCGAAACGGGGCTACATCGGACTAGATTATTACGGCAGAACCGTCAGCGTCAAGATCCTTCCCGTCGGAATTCATATGGGACAGCTTGAATCTATTCTTTCTCTCTCCTCCACTGCTGACAAGGTCAAGGAACTTAGAGAGAGATTCAGAGGGAAAATCGTCATGTTGGGGGTCGACGATATGGATTTGTTCAAAGGAATTAGCTTGAAATTTCTTGCAATGAAACAATTACTAGAACAGAGGACCGATTTAAGAGGAAAAGTTGTGTTGATTCAGATTACAAACCCGGCAAGAAGTCGAGGAAGAGATGTTCAAGACTTCGAAAATGAGATCAAATCCGAAGCTGATGAAATCAATCAGAAATTCGGCCAAGGACAATACGAGCCAATTATTCTCATCAACGGCCCCGTCGCAACCTTAGAAAAAGCCGCCTACTACGCCATTGCCGAATGCTGTGTAGTAAACGCTGTTAGAGACGGAATGAACTTAGTGCCATACAGATACACCGTATGCCGACAAGGCAATCCGGTCTTAGACAAAGCGTTATCGATCGACGAATCGTCGCAGCCTCGGAAAAGCATTCTGATCGTCTCGGAGTTCATCGGATGCTCCCCATCATTAAGCGGAGCAATTCGTGTCAATCCGTGGAATATCGAGGCCGTCTCTGATGCGATGAATTCGGCGATTACAATGGGGGAGACCGAGAAAGGATTGAGACATGAAAAACATTACAAGTACATAAGTTCTCATGATATATCGTATTGGGCGAGGAGTTTCGACCAAGATCTCGAAAGGGTTTGTAGGGATCATTACACAAAGAGGTGTTGGGGGATCGGATTTGGCTTGGGGTTTAGAGTCGTCGCGTTGGGACCTCATTTTCGGAAACTTACAGTCGATCATATCGTTTCGGCTTATAAGAAGACTAAAAATAGGTTGATTTTGTTGGATTATGATGGAACTATGACCCCAAATGGATCTGTGGATAAAGCTCCTAGCAGTGAAGTTATTTCTGTGTTGAATTGTCTCTGTAGTGACCCTACAAATGTGGTTTTTATTGTGAGTGGCAGAGGGAAAGATTGTCTGAGCAAATGGTTCTCCCCTGTTGAGAAACTGGGTATTTCAGCTGAACATGGCTACTTCACAAGATGGTCTTCTGGGCTTAAATGGGAGACTTGCTCTTTGCCCATGGACTTTGACTGGAAAAGAATGGCAGAGCCAGTAATGGCTCTTTACACAGAAGCCACAGATGGTTCATTCATTGAACAGAAGGAAAGTGCATTGGTTTGGCACCATCAAGAAGCCGACCCTCATTTCGGCCTATCACAAGCAAAAGAGCTTCTTGATCATTTAGAAAATGTGCTCGCTAACGAGCCCGTCGTCGTGAAACGAGGGCAACACATCGTCGAAGTCAAACCGCAGGGAGTGAGCAAAGGGGTAGTGGTAAAGAGCCTAATCTCTTCATTGGAGAAACAGGGAATATGTCCGGACTTCGTTCTGTGCGTAGGAGACGATCGATCGGATGAAGATATGTTCGAGAGCATATCAAATTCAGCTAGGGACCCGCCATTGCCAGCCACATCCGAGGTTTTTGCCTGCACTGTTGGTCAGAAACCAAGTATGGCAAAATACTATCTTGATGATACTTCTGAGGTCATTAGGTTGCTTCAAGGCCTTGCCATTTCTTCACAACCCAAGCTACAGCTACAGCCATTTCAATGA 2547 45.54 MLSRSSLTSFNLTSFDDFPALNRIPRVMTVSGVLSRFEAEEDDDSSERLSSPERRIVVSNQLPIRARRDVETGKWEFEFDSDSLVLQLKDGFSSQVEVMYVGSLTADIDVSDQDRVSQLLLAKFRCVPTFLPSEIQNMFYHGFCKHYLWPLFHYMLPLSPGNGDQFNRENWQAYVSANKVFADKIMEVINPEDDYVWIHDYHLMILPTFLRRRFHRIKLGFFLHSPFPSSEIYRSLPVREEILRGLLNSDLIGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLDYYGRTVSVKILPVGIHMGQLESILSLSSTADKVKELRERFRGKIVMLGVDDMDLFKGISLKFLAMKQLLEQRTDLRGKVVLIQITNPARSRGRDVQDFENEIKSEADEINQKFGQGQYEPIILINGPVATLEKAAYYAIAECCVVNAVRDGMNLVPYRYTVCRQGNPVLDKALSIDESSQPRKSILIVSEFIGCSPSLSGAIRVNPWNIEAVSDAMNSAITMGETEKGLRHEKHYKYISSHDISYWARSFDQDLERVCRDHYTKRCWGIGFGLGFRVVALGPHFRKLTVDHIVSAYKKTKNRLILLDYDGTMTPNGSVDKAPSSEVISVLNCLCSDPTNVVFIVSGRGKDCLSKWFSPVEKLGISAEHGYFTRWSSGLKWETCSLPMDFDWKRMAEPVMALYTEATDGSFIEQKESALVWHHQEADPHFGLSQAKELLDHLENVLANEPVVVKRGQHIVEVKPQGVSKGVVVKSLISSLEKQGICPDFVLCVGDDRSDEDMFESISNSARDPPLPATSEVFACTVGQKPSMAKYYLDDTSEVIRLLQGLAISSQPKLQLQPFQ 848
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 210111 213357 - Bda004706.1 Bda11g00014 15122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda11g00014 848 SUPERFAMILY HAD-like 587 834 IPR036412 -
Bda11g00014 848 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 1 840 IPR001830 GO:0003824|GO:0005992
Bda11g00014 848 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 54 544 - -
Bda11g00014 848 Gene3D Glycogen Phosphorylase B; 307 524 - -
Bda11g00014 848 Pfam Trehalose-phosphatase 590 825 IPR003337 GO:0003824|GO:0005992
Bda11g00014 848 CDD HAD_TPP 588 829 - -
Bda11g00014 848 CDD GT20_TPS 54 540 IPR001830 GO:0003824|GO:0005992
Bda11g00014 848 Gene3D Glycogen Phosphorylase B; 46 306 - -
Bda11g00014 848 Pfam Glycosyltransferase family 20 54 540 IPR001830 GO:0003824|GO:0005992
Bda11g00014 848 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE [UDP-FORMING] 11-RELATED 1 840 - -
Bda11g00014 848 Gene3D - 715 844 IPR023214 -
Bda11g00014 848 Gene3D - 586 704 IPR023214 -
Bda11g00014 848 TIGRFAM T6PP: trehalose-phosphatase 585 834 IPR003337 GO:0003824|GO:0005992
Bda11g00014 848 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 588 789 IPR006379 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda06g00586 Bda-Chr6:8106162 Bda11g00014 Bda-Chr11:210111 0 dispersed
Bda08g00635 Bda-Chr8:6534025 Bda11g00014 Bda-Chr11:210111 0 dispersed
Bda09g00542 Bda-Chr9:7106034 Bda11g00014 Bda-Chr11:210111 3.50E-128 dispersed
Bda10g01016 Bda-Chr10:44329733 Bda11g00014 Bda-Chr11:210111 1.86E-06 dispersed
Bda11g00014 Bda-Chr11:210111 Bda10g00095 Bda-Chr10:2266436 2.07E-09 dispersed
Bda11g00014 Bda-Chr11:210111 Bda07g01593 Bda-Chr7:29562641 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda11g00014 K16055 - pvy:116113190 1310.82