Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda11g00056 | ATGACAAGCTGCGTCAATGTTCTACCTGAGAAACTTTGCTACATACCCTGCAATTTTTGCAATATTGTTCTTGCGGTGAATGTTCCATGCAGCAATATGTTTGACAATGTTACCGTCCTATGTGGTCACTGCAAAAATCTCTGGTCTGTGAACATGGCATCTGCATTTCAGTCGCGTTCATGGCAAGATCCCCAGGCTCAAATTTACTCCGACAATCCACCCGACCATTATCGAATCGACTTGGGTTCCTCGTCCAAATGCAACAACAAGATGACACTTCGTCCTCGGACCAAAAACTCGAATTCAGCTGAGAGGCTTGCGAATCAAACTCCCAAGAAGAGGCAAAGGGTTCCTTCTGCATATAATCAGTTCATAAAGGAAGAAATTCAGAGGATCAAGGCCAATAAGCCAGGTATTTCCCACAGGGAAGCATTTAGCACTGCTGCAAAAAATTGGGCACACTTCCCTCATATTCATTATTCACTTTGGTCTGATGCTAGAAACAAACAATCAGGCCAAGGCTGA | 525 | 44.0 | MTSCVNVLPEKLCYIPCNFCNIVLAVNVPCSNMFDNVTVLCGHCKNLWSVNMASAFQSRSWQDPQAQIYSDNPPDHYRIDLGSSSKCNNKMTLRPRTKNSNSAERLANQTPKKRQRVPSAYNQFIKEEIQRIKANKPGISHREAFSTAAKNWAHFPHIHYSLWSDARNKQSGQG | 174 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 675973 | 678125 | - | Bda004756.1 | Bda11g00056 | 15164 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda11g00056 | 174 | SUPERFAMILY | HMG-box | 106 | 156 | IPR036910 | - | |
Bda11g00056 | 174 | PANTHER | PROTEIN YABBY 6-RELATED | 1 | 170 | IPR006780 | GO:0007275 | |
Bda11g00056 | 174 | Pfam | YABBY protein | 9 | 162 | IPR006780 | GO:0007275 | |
Bda11g00056 | 174 | MobiDBLite | consensus disorder prediction | 91 | 118 | - | - | |
Bda11g00056 | 174 | PANTHER | AXIAL REGULATOR YABBY 5 | 1 | 170 | - | - | |
Bda11g00056 | 174 | Gene3D | High mobility group box domain | 106 | 170 | IPR036910 | - | |
Bda11g00056 | 174 | MobiDBLite | consensus disorder prediction | 91 | 117 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bda01g01948 | Bda11g00056 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda09g01385 | Bda-Chr9:45711455 | Bda11g00056 | Bda-Chr11:675973 | 6.67E-48 | dispersed | |
Bda11g00056 | Bda-Chr11:675973 | Bda11g01167 | Bda-Chr11:11996252 | 9.48E-33 | dispersed | |
Bda01g01948 | Bda-Chr1:55878994 | Bda11g00056 | Bda-Chr11:675973 | 7.13E-94 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
16559 | PF04690 | YABBY | 1.60E-61 | CL0114 | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda11g00056 | K25796 | - | csin:114301967 | 256.144 |