Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda11g00056 ATGACAAGCTGCGTCAATGTTCTACCTGAGAAACTTTGCTACATACCCTGCAATTTTTGCAATATTGTTCTTGCGGTGAATGTTCCATGCAGCAATATGTTTGACAATGTTACCGTCCTATGTGGTCACTGCAAAAATCTCTGGTCTGTGAACATGGCATCTGCATTTCAGTCGCGTTCATGGCAAGATCCCCAGGCTCAAATTTACTCCGACAATCCACCCGACCATTATCGAATCGACTTGGGTTCCTCGTCCAAATGCAACAACAAGATGACACTTCGTCCTCGGACCAAAAACTCGAATTCAGCTGAGAGGCTTGCGAATCAAACTCCCAAGAAGAGGCAAAGGGTTCCTTCTGCATATAATCAGTTCATAAAGGAAGAAATTCAGAGGATCAAGGCCAATAAGCCAGGTATTTCCCACAGGGAAGCATTTAGCACTGCTGCAAAAAATTGGGCACACTTCCCTCATATTCATTATTCACTTTGGTCTGATGCTAGAAACAAACAATCAGGCCAAGGCTGA 525 44.0 MTSCVNVLPEKLCYIPCNFCNIVLAVNVPCSNMFDNVTVLCGHCKNLWSVNMASAFQSRSWQDPQAQIYSDNPPDHYRIDLGSSSKCNNKMTLRPRTKNSNSAERLANQTPKKRQRVPSAYNQFIKEEIQRIKANKPGISHREAFSTAAKNWAHFPHIHYSLWSDARNKQSGQG 174
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 675973 678125 - Bda004756.1 Bda11g00056 15164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda11g00056 174 SUPERFAMILY HMG-box 106 156 IPR036910 -
Bda11g00056 174 PANTHER PROTEIN YABBY 6-RELATED 1 170 IPR006780 GO:0007275
Bda11g00056 174 Pfam YABBY protein 9 162 IPR006780 GO:0007275
Bda11g00056 174 MobiDBLite consensus disorder prediction 91 118 - -
Bda11g00056 174 PANTHER AXIAL REGULATOR YABBY 5 1 170 - -
Bda11g00056 174 Gene3D High mobility group box domain 106 170 IPR036910 -
Bda11g00056 174 MobiDBLite consensus disorder prediction 91 117 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda01g01948 Bda11g00056 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda09g01385 Bda-Chr9:45711455 Bda11g00056 Bda-Chr11:675973 6.67E-48 dispersed
Bda11g00056 Bda-Chr11:675973 Bda11g01167 Bda-Chr11:11996252 9.48E-33 dispersed
Bda01g01948 Bda-Chr1:55878994 Bda11g00056 Bda-Chr11:675973 7.13E-94 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
16559 PF04690 YABBY 1.60E-61 CL0114 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda11g00056 K25796 - csin:114301967 256.144