Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda11g00074 ATGACATTCGAGGACACAGCGAATAGATTTTCCGGTGATAATGACCGGTTTCCGGTGGGCCTGCGTGTCCTTGCGGTGGACGACGACGCTTCTTGTCTGAAATTGGTAGAGAATCTTCTTCGAAACTGCCAGTATAATGTAACAACTACCAATCAGCCAATGGAGGCATTGGAAATGTTGAGGGGAAATAAAGACCAGTTTGACATTGTAATCACTGATGTAAACATGCCCGGAATGGATGGTTATAAGCTTCTCGAGCTGATCGGGCTAGAGATGGATCTCCCCGTCATAATGTTGTCGGCTCATAGCGATACGGAGTTTGTAATGAAGGGAATCTATCACGGGGCTTGTGATTATCTCGTGAAACCGTGTCGAATGACCGAGATCAAGAACATATGGCAACATGTTGTCCGGAAAAAGCGTATGGAACAAAAGGGCAAGAACGATAATTCGAATCCAGATGAACGAGGATTCGTATTGGCTGAAAATTCAGATAATTTGAAAGTGGGTCGAAAGCGAAAGGAACAAATTGAAGGGGTGGAAGATGAGGGGGACGAAAACGAAAATGAAGATCCTTCGACTCAAAAGAAGCCTAGAGTGGTTTGGTCTGTAGAGCTGCACAGAAAGTTTGTTGCAGCTGTTACTCAATTGACTCTTAAAAAAGCCGTTCCGAAGAAGATTCTTGATCTGATGAACGTGGAAGGACTCACACGAGAAAATGTGGCGAGCCATCTTCAGAAATATAGGCTCTACCTGAAAAGAATTAGTACTGCAGGAACCCAACAGGAAAATCCGATGCATATAAGTTTGACTGAGGGATTTGGATTGTCGGGATCTCGAATATTTTCGAGCAATGCGCTCTCATCGTATCCACTGGTTGAAGTTCTTGGTAAATTCCACTCTCCTTCAGGATTGAACTTGCGAATCCGACACAGCACTTCTCATAACTTGAACGATTCTTTGGATTCGCTCGGAAAATTCCCTCAAACCCAATCTCCTGATTTATTTAACGAAATTCCGACGTCGTTAGACCTCACTGACTTGCATCAAGGAAAGTCGGTATATAGAGAGTTTAATCCGATCAGCACTGCCACTGGCTTTTGTAATGCCCCGAATTTTCCGGCACAATAA 1131 43.94 MTFEDTANRFSGDNDRFPVGLRVLAVDDDASCLKLVENLLRNCQYNVTTTNQPMEALEMLRGNKDQFDIVITDVNMPGMDGYKLLELIGLEMDLPVIMLSAHSDTEFVMKGIYHGACDYLVKPCRMTEIKNIWQHVVRKKRMEQKGKNDNSNPDERGFVLAENSDNLKVGRKRKEQIEGVEDEGDENENEDPSTQKKPRVVWSVELHRKFVAAVTQLTLKKAVPKKILDLMNVEGLTRENVASHLQKYRLYLKRISTAGTQQENPMHISLTEGFGLSGSRIFSSNALSSYPLVEVLGKFHSPSGLNLRIRHSTSHNLNDSLDSLGKFPQTQSPDLFNEIPTSLDLTDLHQGKSVYREFNPISTATGFCNAPNFPAQ 376
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 917530 919661 - Bda004775.1 Bda11g00074 15182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda11g00074 376 CDD REC_typeB_ARR-like 23 137 - -
Bda11g00074 376 ProSiteProfiles Response regulatory domain profile. 22 137 IPR001789 GO:0000160
Bda11g00074 376 Gene3D - 21 156 - -
Bda11g00074 376 MobiDBLite consensus disorder prediction 142 196 - -
Bda11g00074 376 PANTHER TWO-COMPONENT RESPONSE REGULATOR 2 373 - -
Bda11g00074 376 Pfam Response regulator receiver domain 23 131 IPR001789 GO:0000160
Bda11g00074 376 PIRSF RR_ARR_type-B 1 365 IPR017053 GO:0003677|GO:0003700|GO:0009736
Bda11g00074 376 SUPERFAMILY Homeodomain-like 194 254 IPR009057 -
Bda11g00074 376 Gene3D - 193 256 - -
Bda11g00074 376 PANTHER TWO-COMPONENT RESPONSE REGULATOR 2 373 IPR045279 GO:0009736
Bda11g00074 376 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 194 253 IPR017930 -
Bda11g00074 376 MobiDBLite consensus disorder prediction 166 180 - -
Bda11g00074 376 SMART REC_2 21 133 IPR001789 GO:0000160
Bda11g00074 376 SUPERFAMILY CheY-like 20 145 IPR011006 -
Bda11g00074 376 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 197 250 IPR006447 GO:0003677
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda02g00326 Bda11g00074 CCT
Bda09g00841 Bda11g00074 CCT
Bda02g00326 Bda11g00074 ECH
Bda09g00841 Bda11g00074 ECH
Bda01g01967 Bda11g00074 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda02g00326 Bda-Chr2:43285358 Bda11g00074 Bda-Chr11:917530 9.95E-10 dispersed
Bda09g00841 Bda-Chr9:19284393 Bda11g00074 Bda-Chr11:917530 4.44E-141 dispersed
Bda11g00074 Bda-Chr11:917530 Bda11g00187 Bda-Chr11:2406265 6.41E-94 dispersed
Bda14g00095 Bda-Chr14:684443 Bda11g00074 Bda-Chr11:917530 4.37E-22 dispersed
Bda15g00091 Bda-Chr15:3136179 Bda11g00074 Bda-Chr11:917530 4.59E-15 dispersed
Bda01g01967 Bda-Chr1:56059137 Bda11g00074 Bda-Chr11:917530 7.14E-150 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
16560 PF00072 Response_reg 1.30E-25 CL0304 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda11g00074 K14491 - jre:109012904 414.846