Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda11g00103 AAATTCTGCTCAGCTATGGCGGAAGAAAAGAAGAAGACAGGAAGCAAGTTACAGAAAAGCTACTTTGATGTGCTTGGAATTTGCTGTTCGTCAGAAGTTGGTCTGATAGAAAACATTTTGAAGCCACTGGATGGAATCAAAGAAATATCTGTCATAGTCCCAACAAGAACAGTAATTGTTCTTCACGATTCCATGGTTATATCCCAGATTCAAATAGCTAAAGCATTAAACCAAGCAAGGTTAGAAGCAAATGTGAGATTAAATGGAGAAGAAAACTACAAGAAGAAATGGCCAAGTCCTTATGCAATTGCAAGTGGTTCCTTGCTTTCACTTTCTCTTCTTAAATATGTATACCATCCACTCCAATGGCTTGCTCTTGGTGCCGTTGCCTTGGGGATCATCCCGATTGCCTTGAAAGCTACTGCTTCGATTCGTAATTTCCGGCTCGACATCAACATTCTCATTATTATTGCAGTGATTGGGACGATCGCCATGAACGACTATTTGGAAGCCGGAACCATTGTCTTCCTTTTCACCATAGCTGAATGGCTTGAGTCAAGGGCAAGCCACAAGGCCAAGGCCGTGATGTCTTCATTGATGAACATAGCTCCTCAGAATGCAGTCATAGCCGAGACTGGGGAGCTTGTCGACGCGGGGGAAGTGAAGATAAACACAATCATAGCCATTAAGGCCGGAGAAATCGTACCAATCGATGGCCTCGTAGTTGCTGGAAAATGTGACGTCGACGAGAAAAATTTAACCGGAGAGTCTTTCCCAGTTGCCAAACAGAAAGATTCATCAGTTTGGGCAGGAACCATCAATCTAAATGGGTATGTTAGTGTTAAAACCACTGCTCTAGCTGAAGATTGTGTGGTGGCTAAGATGGCGAAGCTTGTAGAAGAGGCACAGAACAACAAGTCTAGCACCCAGAAATTCATCGATAAGTGCACGAAATTTTACACGCCAGCTGTTATAGTCGTATCGGCAAGTTTAGCAGTGGTTCCAGCCGCATTACGAGTCGACAACACTAAGCATTGGTTTCATTTGGCACTAGTCGTGTTAGTAAGTGCATGTCCGTGTGCGCTTATTCTTTCGACACCTGTTGCGACATTTTGTGCTCTCACGAAGGCGGCTAAGTCCGGTCTCCTAATCAAGGGTGGAGATTTTCTAGAAACTCTGGCGAAAATCAAGGTCATCGCCTTCGATAAAACCGGAACCATCACACGAGGCGAATTCGTCGTTACGGATTGTCAAGTTCTTCAATTTGATATTGACATGAACATGTTTGTTTATTGGGTTACGAGCATCGAAAGCAAATCGAGCCATCCGTTGGCAGCTGCTATTATCGACTACGGACGCTTGCATTCCATCGATTGTAAACCTGAAAATGTCGAGAAGTTCGAAAACTTTCCGGGAGAAGGAGTGTATGGAAAAATAGATGGTAAAGAATTCTATGTTGGGAGTAGAAAAATTGCTACAAGAGCCGGATGTCCGGCAGCAAGAGAACATGTAACGGAAGGGAAGAGTATCGGATATGTATTTAGCGAAGGAGAACTACTCGGAAAATTCAGTCTGTCCGATAAATGTCGATCCGGTGTAGAGGAGGCGATCACGGAGATCAAATCTTTAGGTATTAAGACTGCCATGCTTACCGGGGATTCTATCGCAGCAGCCATGCATGTTCAACAACAGCTGAGAAGTGTTCTAGAGGAAGTACATGGAGAGCTTCTGCCAGAAGAAAAGGCCAAAATGATAAGGAGGTTCAAGAAAGAAGGTCCAACAGCCATGGTCGGAGATGGAATAAACGATGCGCCAGCTCTAGCGACGGCCGACATTGGAATTTCTATGGGGATTTCAGGATCAGCACTCGCAAACGAAACAGGAAACGTAATTTTGATGTCGAACGACGTACGAAAAGTGGGGAAGGTCATAAAAATAGCAAGAAAATGCATGAGAAAAGTAGTGGAAAATGTGGTTTTGTCTTTCATTACAAAAGCAGCCATTTTGGGGCTTGGATTTGCAGGTCATCCATTGATATGGGCTGCAGTTTTAGCAGATGTAGGAACTTGCTTAATGGTCACCTTGAACAGTATGTTGCTGCTCAAAGGTGTAGATGGGTCTTCTGATCATCATCACCACCATCACCATAAGGGAAATAGCCATTGTTGTTCCAAGAAAGCTTCTGTGATTGAGAAATGTGCAGAAAGTGATGAAGAAAATCATTGCCATGGGAAAGCTCAGAAAATGGACAACAATGGTGGTTTGGAGAGCGGTGGAGGTGGGTCTTCTGATCGGCATCATCACCATAAGGGAAACAGCCATTGTTGCTCCAAGAAAACCTCTGTGGTCCAGAAATGTGCAGGAAGTGGTAAAGAAAAGCACTGCCATGGAAAAGCTCATAAAATTGACAACAATGGCGGTTTGGAGTGTTGCAGAGAAGAAAATGGAGAAGACCCAGATGGTAAAAGAGGTTGTTGCGTTGAAAAAGATGAGTTGGAGAAAAATTCCCATAGCAATTGCTGTTCAAAGAGAGCTTCTCAACAATGTACCGAAAAAGGTCAGGTTGGGGAAAGAAAGCACTGTCGTGAAGCTCTGAAAATGGACAACAATGGCGGTTTGGAATTATTGAGAGAAACAAATGGAGAACACCCAGATGAAAAAATTAGTTGTTGCGTTCAAAAAGATGCGATTCAGACAAATCGCAGCCATTGTTGTTCAAAGAGAGCTTCTGGTCCTCAGAAATGTGGAGGAAATGGGAAAGGAAAGCACTGCAATGGAAGAGCTCAGGAAATGGAAAACAATGGCGGATTGAGATCATGCAAGCTTGAAAATGGCGAAAACTCAGATGAGACAAAAGGCTGCTGCGTTGAAAAAGAAGGATTCAATAGAAACTACGATAACCCTTCTGATTCAAGTTCAGAAGAAAGAAAAAGGTCGAGAAACTGCTGCCATGGCGAAACTCAAACGAGATTCTTCATACCGCCATTGATATGGAGAAGCTTGTAG 3006 43.51 KFCSAMAEEKKKTGSKLQKSYFDVLGICCSSEVGLIENILKPLDGIKEISVIVPTRTVIVLHDSMVISQIQIAKALNQARLEANVRLNGEENYKKKWPSPYAIASGSLLSLSLLKYVYHPLQWLALGAVALGIIPIALKATASIRNFRLDINILIIIAVIGTIAMNDYLEAGTIVFLFTIAEWLESRASHKAKAVMSSLMNIAPQNAVIAETGELVDAGEVKINTIIAIKAGEIVPIDGLVVAGKCDVDEKNLTGESFPVAKQKDSSVWAGTINLNGYVSVKTTALAEDCVVAKMAKLVEEAQNNKSSTQKFIDKCTKFYTPAVIVVSASLAVVPAALRVDNTKHWFHLALVVLVSACPCALILSTPVATFCALTKAAKSGLLIKGGDFLETLAKIKVIAFDKTGTITRGEFVVTDCQVLQFDIDMNMFVYWVTSIESKSSHPLAAAIIDYGRLHSIDCKPENVEKFENFPGEGVYGKIDGKEFYVGSRKIATRAGCPAAREHVTEGKSIGYVFSEGELLGKFSLSDKCRSGVEEAITEIKSLGIKTAMLTGDSIAAAMHVQQQLRSVLEEVHGELLPEEKAKMIRRFKKEGPTAMVGDGINDAPALATADIGISMGISGSALANETGNVILMSNDVRKVGKVIKIARKCMRKVVENVVLSFITKAAILGLGFAGHPLIWAAVLADVGTCLMVTLNSMLLLKGVDGSSDHHHHHHHKGNSHCCSKKASVIEKCAESDEENHCHGKAQKMDNNGGLESGGGGSSDRHHHHKGNSHCCSKKTSVVQKCAGSGKEKHCHGKAHKIDNNGGLECCREENGEDPDGKRGCCVEKDELEKNSHSNCCSKRASQQCTEKGQVGERKHCREALKMDNNGGLELLRETNGEHPDEKISCCVQKDAIQTNRSHCCSKRASGPQKCGGNGKGKHCNGRAQEMENNGGLRSCKLENGENSDETKGCCVEKEGFNRNYDNPSDSSSEERKRSRNCCHGETQTRFFIPPLIWRSL 1001
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 1242806 1250287 + Bda004806.1 Bda11g00103 15211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda11g00103 1001 MobiDBLite consensus disorder prediction 744 775 - -
Bda11g00103 1001 SUPERFAMILY Calcium ATPase, transduction domain A 214 299 IPR008250 -
Bda11g00103 1001 SUPERFAMILY HMA, heavy metal-associated domain 15 84 IPR036163 GO:0046872
Bda11g00103 1001 PRINTS P-type cation-transporting ATPase superfamily signature 400 414 - -
Bda11g00103 1001 PRINTS P-type cation-transporting ATPase superfamily signature 597 616 - -
Bda11g00103 1001 PRINTS P-type cation-transporting ATPase superfamily signature 621 633 - -
Bda11g00103 1001 PRINTS P-type cation-transporting ATPase superfamily signature 249 263 - -
Bda11g00103 1001 PRINTS P-type cation-transporting ATPase superfamily signature 543 553 - -
Bda11g00103 1001 SFLD p-type atpase 383 649 IPR044492 -
Bda11g00103 1001 Gene3D - 14 87 - -
Bda11g00103 1001 Pfam haloacid dehalogenase-like hydrolase 396 611 - -
Bda11g00103 1001 TIGRFAM ATPase-IB2_Cd: cadmium-translocating P-type ATPase 151 701 - -
Bda11g00103 1001 CDD HMA 22 83 IPR006121 GO:0046872
Bda11g00103 1001 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 151 700 IPR027256 GO:0006812|GO:0016021|GO:0019829
Bda11g00103 1001 Gene3D - 391 648 IPR023214 -
Bda11g00103 1001 PRINTS Cadmium-transporting ATPase signature 33 54 IPR027256 GO:0006812|GO:0016021|GO:0019829
Bda11g00103 1001 PRINTS Cadmium-transporting ATPase signature 186 206 IPR027256 GO:0006812|GO:0016021|GO:0019829
Bda11g00103 1001 PRINTS Cadmium-transporting ATPase signature 265 281 IPR027256 GO:0006812|GO:0016021|GO:0019829
Bda11g00103 1001 PRINTS Cadmium-transporting ATPase signature 284 298 IPR027256 GO:0006812|GO:0016021|GO:0019829
Bda11g00103 1001 CDD P-type_ATPase_HM 101 699 - -
Bda11g00103 1001 SFLD C1.7: P-type atpase like 383 649 - -
Bda11g00103 1001 ProSiteProfiles Heavy-metal-associated domain profile. 19 85 IPR006121 GO:0046872
Bda11g00103 1001 SUPERFAMILY HAD-like 398 698 IPR036412 -
Bda11g00103 1001 Pfam E1-E2 ATPase 211 379 - -
Bda11g00103 1001 PANTHER CADMIUM/ZINC-TRANSPORTING ATPASE HMA2-RELATED 6 965 - -
Bda11g00103 1001 Gene3D - 188 303 - -
Bda11g00103 1001 SUPERFAMILY Calcium ATPase, transmembrane domain M 151 670 IPR023298 -
Bda11g00103 1001 Gene3D - 411 529 IPR023299 GO:0000166
Bda11g00103 1001 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 174 672 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bda11g00103 1001 ProSitePatterns E1-E2 ATPases phosphorylation site. 402 408 IPR018303 -
Bda11g00103 1001 PANTHER CADMIUM/ZINC-TRANSPORTING ATPASE HMA4-RELATED 6 965 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda04g00191 Bda-Chr4:6168047 Bda11g00103 Bda-Chr11:1242806 9.97E-58 dispersed
Bda04g00194 Bda-Chr4:6420544 Bda11g00103 Bda-Chr11:1242806 1.67E-57 dispersed
Bda09g00041 Bda-Chr9:615048 Bda11g00103 Bda-Chr11:1242806 1.94E-68 dispersed
Bda11g00103 Bda-Chr11:1242806 Bda09g00789 Bda-Chr9:14748283 1.36E-75 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda11g00103 K01534 - jre:109019139 1033.86