Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda11g00103 | AAATTCTGCTCAGCTATGGCGGAAGAAAAGAAGAAGACAGGAAGCAAGTTACAGAAAAGCTACTTTGATGTGCTTGGAATTTGCTGTTCGTCAGAAGTTGGTCTGATAGAAAACATTTTGAAGCCACTGGATGGAATCAAAGAAATATCTGTCATAGTCCCAACAAGAACAGTAATTGTTCTTCACGATTCCATGGTTATATCCCAGATTCAAATAGCTAAAGCATTAAACCAAGCAAGGTTAGAAGCAAATGTGAGATTAAATGGAGAAGAAAACTACAAGAAGAAATGGCCAAGTCCTTATGCAATTGCAAGTGGTTCCTTGCTTTCACTTTCTCTTCTTAAATATGTATACCATCCACTCCAATGGCTTGCTCTTGGTGCCGTTGCCTTGGGGATCATCCCGATTGCCTTGAAAGCTACTGCTTCGATTCGTAATTTCCGGCTCGACATCAACATTCTCATTATTATTGCAGTGATTGGGACGATCGCCATGAACGACTATTTGGAAGCCGGAACCATTGTCTTCCTTTTCACCATAGCTGAATGGCTTGAGTCAAGGGCAAGCCACAAGGCCAAGGCCGTGATGTCTTCATTGATGAACATAGCTCCTCAGAATGCAGTCATAGCCGAGACTGGGGAGCTTGTCGACGCGGGGGAAGTGAAGATAAACACAATCATAGCCATTAAGGCCGGAGAAATCGTACCAATCGATGGCCTCGTAGTTGCTGGAAAATGTGACGTCGACGAGAAAAATTTAACCGGAGAGTCTTTCCCAGTTGCCAAACAGAAAGATTCATCAGTTTGGGCAGGAACCATCAATCTAAATGGGTATGTTAGTGTTAAAACCACTGCTCTAGCTGAAGATTGTGTGGTGGCTAAGATGGCGAAGCTTGTAGAAGAGGCACAGAACAACAAGTCTAGCACCCAGAAATTCATCGATAAGTGCACGAAATTTTACACGCCAGCTGTTATAGTCGTATCGGCAAGTTTAGCAGTGGTTCCAGCCGCATTACGAGTCGACAACACTAAGCATTGGTTTCATTTGGCACTAGTCGTGTTAGTAAGTGCATGTCCGTGTGCGCTTATTCTTTCGACACCTGTTGCGACATTTTGTGCTCTCACGAAGGCGGCTAAGTCCGGTCTCCTAATCAAGGGTGGAGATTTTCTAGAAACTCTGGCGAAAATCAAGGTCATCGCCTTCGATAAAACCGGAACCATCACACGAGGCGAATTCGTCGTTACGGATTGTCAAGTTCTTCAATTTGATATTGACATGAACATGTTTGTTTATTGGGTTACGAGCATCGAAAGCAAATCGAGCCATCCGTTGGCAGCTGCTATTATCGACTACGGACGCTTGCATTCCATCGATTGTAAACCTGAAAATGTCGAGAAGTTCGAAAACTTTCCGGGAGAAGGAGTGTATGGAAAAATAGATGGTAAAGAATTCTATGTTGGGAGTAGAAAAATTGCTACAAGAGCCGGATGTCCGGCAGCAAGAGAACATGTAACGGAAGGGAAGAGTATCGGATATGTATTTAGCGAAGGAGAACTACTCGGAAAATTCAGTCTGTCCGATAAATGTCGATCCGGTGTAGAGGAGGCGATCACGGAGATCAAATCTTTAGGTATTAAGACTGCCATGCTTACCGGGGATTCTATCGCAGCAGCCATGCATGTTCAACAACAGCTGAGAAGTGTTCTAGAGGAAGTACATGGAGAGCTTCTGCCAGAAGAAAAGGCCAAAATGATAAGGAGGTTCAAGAAAGAAGGTCCAACAGCCATGGTCGGAGATGGAATAAACGATGCGCCAGCTCTAGCGACGGCCGACATTGGAATTTCTATGGGGATTTCAGGATCAGCACTCGCAAACGAAACAGGAAACGTAATTTTGATGTCGAACGACGTACGAAAAGTGGGGAAGGTCATAAAAATAGCAAGAAAATGCATGAGAAAAGTAGTGGAAAATGTGGTTTTGTCTTTCATTACAAAAGCAGCCATTTTGGGGCTTGGATTTGCAGGTCATCCATTGATATGGGCTGCAGTTTTAGCAGATGTAGGAACTTGCTTAATGGTCACCTTGAACAGTATGTTGCTGCTCAAAGGTGTAGATGGGTCTTCTGATCATCATCACCACCATCACCATAAGGGAAATAGCCATTGTTGTTCCAAGAAAGCTTCTGTGATTGAGAAATGTGCAGAAAGTGATGAAGAAAATCATTGCCATGGGAAAGCTCAGAAAATGGACAACAATGGTGGTTTGGAGAGCGGTGGAGGTGGGTCTTCTGATCGGCATCATCACCATAAGGGAAACAGCCATTGTTGCTCCAAGAAAACCTCTGTGGTCCAGAAATGTGCAGGAAGTGGTAAAGAAAAGCACTGCCATGGAAAAGCTCATAAAATTGACAACAATGGCGGTTTGGAGTGTTGCAGAGAAGAAAATGGAGAAGACCCAGATGGTAAAAGAGGTTGTTGCGTTGAAAAAGATGAGTTGGAGAAAAATTCCCATAGCAATTGCTGTTCAAAGAGAGCTTCTCAACAATGTACCGAAAAAGGTCAGGTTGGGGAAAGAAAGCACTGTCGTGAAGCTCTGAAAATGGACAACAATGGCGGTTTGGAATTATTGAGAGAAACAAATGGAGAACACCCAGATGAAAAAATTAGTTGTTGCGTTCAAAAAGATGCGATTCAGACAAATCGCAGCCATTGTTGTTCAAAGAGAGCTTCTGGTCCTCAGAAATGTGGAGGAAATGGGAAAGGAAAGCACTGCAATGGAAGAGCTCAGGAAATGGAAAACAATGGCGGATTGAGATCATGCAAGCTTGAAAATGGCGAAAACTCAGATGAGACAAAAGGCTGCTGCGTTGAAAAAGAAGGATTCAATAGAAACTACGATAACCCTTCTGATTCAAGTTCAGAAGAAAGAAAAAGGTCGAGAAACTGCTGCCATGGCGAAACTCAAACGAGATTCTTCATACCGCCATTGATATGGAGAAGCTTGTAG | 3006 | 43.51 | KFCSAMAEEKKKTGSKLQKSYFDVLGICCSSEVGLIENILKPLDGIKEISVIVPTRTVIVLHDSMVISQIQIAKALNQARLEANVRLNGEENYKKKWPSPYAIASGSLLSLSLLKYVYHPLQWLALGAVALGIIPIALKATASIRNFRLDINILIIIAVIGTIAMNDYLEAGTIVFLFTIAEWLESRASHKAKAVMSSLMNIAPQNAVIAETGELVDAGEVKINTIIAIKAGEIVPIDGLVVAGKCDVDEKNLTGESFPVAKQKDSSVWAGTINLNGYVSVKTTALAEDCVVAKMAKLVEEAQNNKSSTQKFIDKCTKFYTPAVIVVSASLAVVPAALRVDNTKHWFHLALVVLVSACPCALILSTPVATFCALTKAAKSGLLIKGGDFLETLAKIKVIAFDKTGTITRGEFVVTDCQVLQFDIDMNMFVYWVTSIESKSSHPLAAAIIDYGRLHSIDCKPENVEKFENFPGEGVYGKIDGKEFYVGSRKIATRAGCPAAREHVTEGKSIGYVFSEGELLGKFSLSDKCRSGVEEAITEIKSLGIKTAMLTGDSIAAAMHVQQQLRSVLEEVHGELLPEEKAKMIRRFKKEGPTAMVGDGINDAPALATADIGISMGISGSALANETGNVILMSNDVRKVGKVIKIARKCMRKVVENVVLSFITKAAILGLGFAGHPLIWAAVLADVGTCLMVTLNSMLLLKGVDGSSDHHHHHHHKGNSHCCSKKASVIEKCAESDEENHCHGKAQKMDNNGGLESGGGGSSDRHHHHKGNSHCCSKKTSVVQKCAGSGKEKHCHGKAHKIDNNGGLECCREENGEDPDGKRGCCVEKDELEKNSHSNCCSKRASQQCTEKGQVGERKHCREALKMDNNGGLELLRETNGEHPDEKISCCVQKDAIQTNRSHCCSKRASGPQKCGGNGKGKHCNGRAQEMENNGGLRSCKLENGENSDETKGCCVEKEGFNRNYDNPSDSSSEERKRSRNCCHGETQTRFFIPPLIWRSL | 1001 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 1242806 | 1250287 | + | Bda004806.1 | Bda11g00103 | 15211 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda11g00103 | 1001 | MobiDBLite | consensus disorder prediction | 744 | 775 | - | - | |
Bda11g00103 | 1001 | SUPERFAMILY | Calcium ATPase, transduction domain A | 214 | 299 | IPR008250 | - | |
Bda11g00103 | 1001 | SUPERFAMILY | HMA, heavy metal-associated domain | 15 | 84 | IPR036163 | GO:0046872 | |
Bda11g00103 | 1001 | PRINTS | P-type cation-transporting ATPase superfamily signature | 400 | 414 | - | - | |
Bda11g00103 | 1001 | PRINTS | P-type cation-transporting ATPase superfamily signature | 597 | 616 | - | - | |
Bda11g00103 | 1001 | PRINTS | P-type cation-transporting ATPase superfamily signature | 621 | 633 | - | - | |
Bda11g00103 | 1001 | PRINTS | P-type cation-transporting ATPase superfamily signature | 249 | 263 | - | - | |
Bda11g00103 | 1001 | PRINTS | P-type cation-transporting ATPase superfamily signature | 543 | 553 | - | - | |
Bda11g00103 | 1001 | SFLD | p-type atpase | 383 | 649 | IPR044492 | - | |
Bda11g00103 | 1001 | Gene3D | - | 14 | 87 | - | - | |
Bda11g00103 | 1001 | Pfam | haloacid dehalogenase-like hydrolase | 396 | 611 | - | - | |
Bda11g00103 | 1001 | TIGRFAM | ATPase-IB2_Cd: cadmium-translocating P-type ATPase | 151 | 701 | - | - | |
Bda11g00103 | 1001 | CDD | HMA | 22 | 83 | IPR006121 | GO:0046872 | |
Bda11g00103 | 1001 | TIGRFAM | ATPase-IB_hvy: heavy metal translocating P-type ATPase | 151 | 700 | IPR027256 | GO:0006812|GO:0016021|GO:0019829 | |
Bda11g00103 | 1001 | Gene3D | - | 391 | 648 | IPR023214 | - | |
Bda11g00103 | 1001 | PRINTS | Cadmium-transporting ATPase signature | 33 | 54 | IPR027256 | GO:0006812|GO:0016021|GO:0019829 | |
Bda11g00103 | 1001 | PRINTS | Cadmium-transporting ATPase signature | 186 | 206 | IPR027256 | GO:0006812|GO:0016021|GO:0019829 | |
Bda11g00103 | 1001 | PRINTS | Cadmium-transporting ATPase signature | 265 | 281 | IPR027256 | GO:0006812|GO:0016021|GO:0019829 | |
Bda11g00103 | 1001 | PRINTS | Cadmium-transporting ATPase signature | 284 | 298 | IPR027256 | GO:0006812|GO:0016021|GO:0019829 | |
Bda11g00103 | 1001 | CDD | P-type_ATPase_HM | 101 | 699 | - | - | |
Bda11g00103 | 1001 | SFLD | C1.7: P-type atpase like | 383 | 649 | - | - | |
Bda11g00103 | 1001 | ProSiteProfiles | Heavy-metal-associated domain profile. | 19 | 85 | IPR006121 | GO:0046872 | |
Bda11g00103 | 1001 | SUPERFAMILY | HAD-like | 398 | 698 | IPR036412 | - | |
Bda11g00103 | 1001 | Pfam | E1-E2 ATPase | 211 | 379 | - | - | |
Bda11g00103 | 1001 | PANTHER | CADMIUM/ZINC-TRANSPORTING ATPASE HMA2-RELATED | 6 | 965 | - | - | |
Bda11g00103 | 1001 | Gene3D | - | 188 | 303 | - | - | |
Bda11g00103 | 1001 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 151 | 670 | IPR023298 | - | |
Bda11g00103 | 1001 | Gene3D | - | 411 | 529 | IPR023299 | GO:0000166 | |
Bda11g00103 | 1001 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 174 | 672 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Bda11g00103 | 1001 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 402 | 408 | IPR018303 | - | |
Bda11g00103 | 1001 | PANTHER | CADMIUM/ZINC-TRANSPORTING ATPASE HMA4-RELATED | 6 | 965 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda04g00191 | Bda-Chr4:6168047 | Bda11g00103 | Bda-Chr11:1242806 | 9.97E-58 | dispersed | |
Bda04g00194 | Bda-Chr4:6420544 | Bda11g00103 | Bda-Chr11:1242806 | 1.67E-57 | dispersed | |
Bda09g00041 | Bda-Chr9:615048 | Bda11g00103 | Bda-Chr11:1242806 | 1.94E-68 | dispersed | |
Bda11g00103 | Bda-Chr11:1242806 | Bda09g00789 | Bda-Chr9:14748283 | 1.36E-75 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda11g00103 | K01534 | - | jre:109019139 | 1033.86 |