Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda11g00106 ATGGCAGTGATGATACTGGAATTCGGGCTTGTGGCGATGGTATTCTTGACCTTCTTAGTTGTTGGGAAGGCTGAGGTTTACATAGTCACAGTTGAAGGAGAGCCAGTGACGAGTTACCAAGGTGGAGTGAATGGTTTTGAAGCGACAGCTGTGGAATCTGATGAAAGAATTGATACTACCAGTGAATTGGTGATATCTTATGCTCATCACTTAGAAAGGAAACATGATATGCTTCTTGGGATGTTGTTCGAGAGTGGGACCTATAAGAAACTATACAGTTATCGGCATCTCATCAATGGATTTGCTGTTCATATTACACCTGAACAGGCAGAAACCCTAAGACGCACACCAAGTGTTAAATCTGTGGAGAGAGACTGGAAGGTGAGGAGACTTACCACGCACACCCCTCAATTTTTGGGGCTTCCAACCGAGGTATGGCCTACAGGAGGTGGTTTTGACAGAGCTGGAGAGGACATTGTGATAGGATTTGTGGATTCGGGTATCTATCCACATCATCCAAGTTTTGCAACCTACAATACTGAACCATTCGGACCTGTTGGAAAGTATAGTGGTAAATGTGAAGTTGATCTTGACACTAAAAAAGATTTCTGTAATGGGAAAATTGTCGGAGCTCAACATTTTGCTGAAGCGGCTAAAGCAGTTGGCGCATTTAATCCTTCTGTTGATTTTGCATCTCCTTTGGATGGTGATGGACATGGAAGTCATACAGCAGCTATTGCAGCTGGAAATAATGGAATACCTGTGAGAATGCATGGTTATGAATTTGGAAAAGCTAGTGGCATGGCTCCCCGTGCCAGGATTGCTGTGTACAAAGCACTCTACAGGCTCTTTGGCGGATTTGTTGCGGATGTAGTGGCTGCTATTGATCAGGCTGTACACGATGGGGTCGATATACTCAGTCTCTCAGTGGGACCTAACAGTCCCCCAGCAACCACCAAAACCACATTTTTAAACCCTTTTGATGCTACCCTTCTTTCAGCAGTGAAGGCAGGGGTATTCGTTGCACAGGCAGCTGGAAATGGAGGTCCTTTCCCCAAATCTTTGGTTTCCTATAGCCCTTGGATGACATCCGTTGCTGCAGCAATTGATGACCGGAGATACAAAAATCATCTGACCCTTGGAAATGGAAAACTATTATCTGGGATTGGTTTATCACCTTCTACTCATTTAAATCAAACGTATACCTTGGTAGCAGCAAATGACGTGTTGCTAGATTCTTCAGTAGTGAAGTTCAGCCCATCCGACTGTCAGAGTCCTGAAGTTCTAAATAAGAACTTGGTTGAAGGAAACATCCTACTTTGTGGTTACTCCTTCAATTTTGCTGCTGGCACAGCATCTATTAAGAAAGTATCAGAAACAGCTAGGAGTCTTGGTGCAGTTGGCTTTGTCCTTGCTGTAGAAAATGTTTCTCCAGGAGCAAAATTTGATCCTGTTCCTAGCGGTCTTCCAGGAATACTAATCACAAATGTTAGCAAGTCAATGGATCTTATTGATTATTACAACACCTCTACGCCAAGAGATTGGACTGGAAGAGTGAAAAGCTTCAAAGCTGTAGGTAGAATTGGGGATGGTTTGATGCCTCTACTATACAAATCAGCCCCACAGGTGGCATTATTTTCAGCTCGAGGTCCTAACATAAGAGATTTTAACTTCCAAGATGCCGACCTTCTAAAACCAGATATTCTGGCTCCTGGTTCTCTCATTTGGGCTGCTTGGTCTCCAAATGGAACAGATGAGCCTAACTATGTCGGTGAGAGATTTGCGATGATTTCTGGAACTAGCATGGCGGCTCCACACATAGCTGGAATAGCAGCTCTTATAAAACAGAAGCACCCTGATTGGAGCCCTGCTGCTATTAAATCAGCTCTGATGACAACATCGACAAAAATTGACAGAGCTGGAAGACCCCTTAAAGCACAGCAATATTCTGAATCAGAGACAGTGAATTTGGTTATTGCTACACCTTTTGATTACGGAAGCGGTCATGTAAATCCGAGTGCTGCTTTGGATCCTGGTCTCATCTTCGATGCAGGTTACGAGGATTACCTGGGATTTCTATGCACAACGCCCGGAATTGATGTTCGTGAGATAATGAACTACACAAGCACACCCTGTAACTTCACCCTGAGCCACCCTTCAAACTTCAACAGTCCATCAATCACTATCTCCCATCTTGTGGGAACTCAGACCGTCACTCGGACTGTAACGAATGTCGACGAGGAAGAAACTTACGTAATCTCTGCAAGAATGGATCCTTCCATTGCAATCGAAACATATCCTCCAATCATGACTCTTACTCCTGGTTTCTCGCGAAAATTCTCCGTCACTCTCACGGTTAGATCTGTCACCGGTTCGTATTCTTTTGGGGAGGTTGTGCTCAAAGGCAGCAGAGGACACCAGGTGAGAATTCCTGTTGTAGTAATGGGATATCCAAGGTAA 2460 44.27 MAVMILEFGLVAMVFLTFLVVGKAEVYIVTVEGEPVTSYQGGVNGFEATAVESDERIDTTSELVISYAHHLERKHDMLLGMLFESGTYKKLYSYRHLINGFAVHITPEQAETLRRTPSVKSVERDWKVRRLTTHTPQFLGLPTEVWPTGGGFDRAGEDIVIGFVDSGIYPHHPSFATYNTEPFGPVGKYSGKCEVDLDTKKDFCNGKIVGAQHFAEAAKAVGAFNPSVDFASPLDGDGHGSHTAAIAAGNNGIPVRMHGYEFGKASGMAPRARIAVYKALYRLFGGFVADVVAAIDQAVHDGVDILSLSVGPNSPPATTKTTFLNPFDATLLSAVKAGVFVAQAAGNGGPFPKSLVSYSPWMTSVAAAIDDRRYKNHLTLGNGKLLSGIGLSPSTHLNQTYTLVAANDVLLDSSVVKFSPSDCQSPEVLNKNLVEGNILLCGYSFNFAAGTASIKKVSETARSLGAVGFVLAVENVSPGAKFDPVPSGLPGILITNVSKSMDLIDYYNTSTPRDWTGRVKSFKAVGRIGDGLMPLLYKSAPQVALFSARGPNIRDFNFQDADLLKPDILAPGSLIWAAWSPNGTDEPNYVGERFAMISGTSMAAPHIAGIAALIKQKHPDWSPAAIKSALMTTSTKIDRAGRPLKAQQYSESETVNLVIATPFDYGSGHVNPSAALDPGLIFDAGYEDYLGFLCTTPGIDVREIMNYTSTPCNFTLSHPSNFNSPSITISHLVGTQTVTRTVTNVDEEETYVISARMDPSIAIETYPPIMTLTPGFSRKFSVTLTVRSVTGSYSFGEVVLKGSRGHQVRIPVVVMGYPR 819
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 1352641 1364850 + Bda004813.1 Bda11g00106 15214

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bda11g00106 819 ProSitePatterns Serine proteases, subtilase family, serine active site. 599 609 IPR023828 -
Bda11g00106 819 Gene3D - 694 816 - -
Bda11g00106 819 CDD Peptidases_S8_3 132 635 IPR034197 -
Bda11g00106 819 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 16 818 IPR045051 -
Bda11g00106 819 Pfam Subtilase family 156 637 IPR000209 GO:0006508|GO:0008236
Bda11g00106 819 Pfam Peptidase inhibitor I9 26 129 IPR010259 -
Bda11g00106 819 SUPERFAMILY Subtilisin-like 131 680 IPR036852 GO:0004252|GO:0006508
Bda11g00106 819 ProSiteProfiles Serine proteases, subtilase domain profile. 125 676 - -
Bda11g00106 819 SUPERFAMILY Protease propeptides/inhibitors 88 129 - -
Bda11g00106 819 Pfam Fibronectin type-III domain 721 814 IPR041469 -
Bda11g00106 819 Gene3D - 371 536 - -
Bda11g00106 819 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 22 130 IPR037045 -
Bda11g00106 819 PANTHER CUCUMISIN-RELATED 16 818 - -
Bda11g00106 819 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 161 172 IPR023827 -
Bda11g00106 819 CDD PA_subtilisin_like 378 516 - -
Bda11g00106 819 PRINTS Subtilisin serine protease family (S8) signature 156 175 IPR015500 -
Bda11g00106 819 PRINTS Subtilisin serine protease family (S8) signature 235 248 IPR015500 -
Bda11g00106 819 PRINTS Subtilisin serine protease family (S8) signature 598 614 IPR015500 -
Bda11g00106 819 Gene3D Peptidase S8/S53 domain 158 689 IPR036852 GO:0004252|GO:0006508
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda11g00106 - - - tcc:18589386 1423.3
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda07g00866 Bda-Chr7:10078799 Bda11g00106 Bda-Chr11:1352641 0 dispersed
Bda11g00106 Bda-Chr11:1352641 Bda02g00365 Bda-Chr2:44053097 2.18E-112 dispersed
Bda08g00471 Bda-Chr8:4904202 Bda11g00106 Bda-Chr11:1352641 1.34E-09 transposed
Bda01g01898 Bda-Chr1:55130119 Bda11g00106 Bda-Chr11:1352641 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi11g907 . . . Bda11g00106 . . . . . . Cma05g00712 Cma12g00908 Car05g00664 Car12g00864 . . . . . . . . . . Cla11g01151 Cam11g1205 Cec11g1222 Cco11g1214 Clacu11g1370 Cmu11g1195 Cre11g1608 Cone2ag0673 Cone16ag0316 . . Lsi06g01226 Csa02g00662 Chy05g00874 Cme02g01629 . . . . . . . Bma06g01023 . Cmo05g00748 Cmo12g00913 . . . . Cpe11g00619 Cpe07g00753 Bhi06g01223 . . . Hepe08g2099 . . . . . . . . . Lsi11g00788 Csa01g02197 Chy02g02268 Cme05g01295
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Bda12g00712 . 1 767 Subtilisin-like Serine Gene Family AT1G04110 67.4 3.7e-311 1063.9
Bda01g00472 . 5 729 Subtilisin-like Serine Gene Family AT1G20150 52.8 3.8e-207 718.4
Bda01g00472 . 2 475 Subtilisin-like Serine Gene Family AT1G20160 56.6 4.8e-140 495.0
Bda07g00866 . 15 765 Subtilisin-like Serine Gene Family AT1G30600 67.8 6.1e-304 1040.0
Bda06g01090 . 52 769 Subtilisin-like Serine Gene Family AT1G32940 55.3 1.2e-226 783.1
Bda06g01090 . 52 769 Subtilisin-like Serine Gene Family AT1G32950 54.3 9.5e-221 763.5
Bda06g01090 . 25 769 Subtilisin-like Serine Gene Family AT1G32960 55.6 1.6e-237 819.3
Bda06g01090 . 24 769 Subtilisin-like Serine Gene Family AT1G32970 50.5 2.9e-201 698.7
Bda01g01763 . 36 771 Subtilisin-like Serine Gene Family AT2G04160 56.3 3.3e-243 838.2
Bda07g00820 . 3 644 Subtilisin-like Serine Gene Family AT2G04160 59.5 2.3e-225 778.9
Bda02g00365 . 23 761 Subtilisin-like Serine Gene Family AT2G05920 69.9 1.2e-306 1048.9
Bda02g00348 . 23 761 Subtilisin-like Serine Gene Family AT2G05920 69.9 1.6e-306 1048.5
Bda01g01993 . 19 757 Subtilisin-like Serine Gene Family AT2G05920 68.2 1.1e-288 989.2
Bda11g01464 . 26 761 Subtilisin-like Serine Gene Family AT2G05920 56.6 1.6e-231 799.3
Bda08g01361 . 25 760 Subtilisin-like Serine Gene Family AT2G05920 54.5 6.5e-220 760.8
Bda07g01841 . 27 778 Subtilisin-like Serine Gene Family AT2G05920 50.4 1.3e-212 736.5
Bda05g00622 . 27 777 Subtilisin-like Serine Gene Family AT2G05920 51.5 7.2e-203 704.1
Bda01g01594 . 35 764 Subtilisin-like Serine Gene Family AT2G05920 52.4 2.1e-202 702.6
Bda10g00887 . 25 776 Subtilisin-like Serine Gene Family AT2G05920 51.0 8.2e-199 690.6
Bda13g00001 . 6 618 Subtilisin-like Serine Gene Family AT2G05920 51.3 1.3e-175 613.6
Bda10g00876 . 1 522 Subtilisin-like Serine Gene Family AT2G05920 55.9 5.8e-160 561.6
Bda01g01898 . 20 819 Subtilisin-like Serine Gene Family AT2G19170 82.3 0.0e+00 1349.7
Bda11g00106 . 6 819 Subtilisin-like Serine Gene Family AT2G19170 81.5 0.0e+00 1349.0
Bda11g01464 . 7 761 Subtilisin-like Serine Gene Family AT3G14067 53.0 1.4e-222 769.6
Bda02g00348 . 27 761 Subtilisin-like Serine Gene Family AT3G14067 53.6 1.6e-218 756.1
Bda02g00365 . 27 761 Subtilisin-like Serine Gene Family AT3G14067 53.6 2.1e-218 755.7
Bda10g00876 . 1 529 Subtilisin-like Serine Gene Family AT3G14067 69.0 6.0e-213 737.6
Bda01g01993 . 21 755 Subtilisin-like Serine Gene Family AT3G14067 54.0 6.7e-212 734.2
Bda08g01361 . 27 760 Subtilisin-like Serine Gene Family AT3G14067 51.8 6.9e-209 724.2
Bda10g00887 . 1 782 Subtilisin-like Serine Gene Family AT3G14067 51.3 4.5e-200 694.9
Bda05g00622 . 24 783 Subtilisin-like Serine Gene Family AT3G14067 50.7 3.6e-197 685.3
Bda13g00001 . 3 617 Subtilisin-like Serine Gene Family AT3G14067 51.3 1.0e-164 577.4
Bda10g00887 . 24 784 Subtilisin-like Serine Gene Family AT3G14240 76.2 0.0e+00 1180.2
Bda05g00622 . 33 785 Subtilisin-like Serine Gene Family AT3G14240 74.3 0.0e+00 1147.1
Bda11g01464 . 28 757 Subtilisin-like Serine Gene Family AT3G14240 53.2 6.6e-220 760.8
Bda02g00365 . 27 757 Subtilisin-like Serine Gene Family AT3G14240 50.9 2.8e-210 728.8
Bda02g00348 . 27 757 Subtilisin-like Serine Gene Family AT3G14240 50.7 1.4e-209 726.5
Bda01g01993 . 22 751 Subtilisin-like Serine Gene Family AT3G14240 51.7 1.5e-208 723.0
Bda08g01361 . 28 756 Subtilisin-like Serine Gene Family AT3G14240 51.1 2.2e-207 719.2
Bda07g01841 . 31 782 Subtilisin-like Serine Gene Family AT3G14240 50.2 2.9e-207 718.8
Bda01g01594 . 38 760 Subtilisin-like Serine Gene Family AT3G14240 50.5 1.1e-203 706.8
Bda13g00001 . 3 618 Subtilisin-like Serine Gene Family AT3G14240 59.2 1.3e-202 703.4
Bda10g00876 . 1 520 Subtilisin-like Serine Gene Family AT3G14240 51.9 3.7e-146 515.8
Bda06g00103 . 2 444 Subtilisin-like Serine Gene Family AT4G00230 50.7 1.7e-138 490.0
Bda09g00063 . 11 391 Subtilisin-like Serine Gene Family AT4G00230 50.3 1.5e-94 344.0
Bda06g01090 . 52 769 Subtilisin-like Serine Gene Family AT4G10510 54.3 2.7e-223 771.9
Bda06g01090 . 22 769 Subtilisin-like Serine Gene Family AT4G10520 54.9 4.8e-231 797.7
Bda06g01090 . 22 769 Subtilisin-like Serine Gene Family AT4G10530 52.9 3.2e-219 758.4
Bda06g01090 . 24 769 Subtilisin-like Serine Gene Family AT4G10540 54.1 2.8e-234 808.5
Bda06g01090 . 52 769 Subtilisin-like Serine Gene Family AT4G10550 53.3 6.6e-222 767.3
Bda07g00866 . 13 765 Subtilisin-like Serine Gene Family AT4G20430 71.8 0.0e+00 1102.0
Bda01g01751 . 1 285 Subtilisin-like Serine Gene Family AT4G21320 75.9 9.6e-132 466.5
Bda06g01090 . 26 764 Subtilisin-like Serine Gene Family AT4G21630 52.1 1.2e-205 713.4
Bda06g01090 . 26 764 Subtilisin-like Serine Gene Family AT4G21650 52.1 9.5e-211 730.3
Bda01g01898 . 7 819 Subtilisin-like Serine Gene Family AT4G30020 81.2 0.0e+00 1352.4
Bda11g00106 . 6 819 Subtilisin-like Serine Gene Family AT4G30020 80.9 0.0e+00 1345.9
Bda13g00001 . 1 623 Subtilisin-like Serine Gene Family AT4G34980 74.4 1.3e-276 949.1
Bda05g00622 . 28 785 Subtilisin-like Serine Gene Family AT4G34980 54.3 4.2e-227 784.6
Bda10g00887 . 14 784 Subtilisin-like Serine Gene Family AT4G34980 52.8 9.4e-227 783.5
Bda11g01464 . 22 757 Subtilisin-like Serine Gene Family AT4G34980 51.1 3.7e-207 718.4
Bda02g00348 . 25 757 Subtilisin-like Serine Gene Family AT4G34980 50.1 2.1e-202 702.6
Bda02g00365 . 25 757 Subtilisin-like Serine Gene Family AT4G34980 50.1 2.8e-202 702.2
Bda10g00876 . 1 520 Subtilisin-like Serine Gene Family AT4G34980 53.2 6.0e-149 525.0
Bda09g00063 . 28 390 Subtilisin-like Serine Gene Family AT5G03620 53.5 4.5e-104 375.6
Bda09g01152 . 274 1005 Subtilisin-like Serine Gene Family AT5G19660 79.6 0.0e+00 1223.4
Bda07g00866 . 12 541 Subtilisin-like Serine Gene Family AT5G44530 72.3 9.1e-236 813.1
Bda09g00832 . 1 627 Subtilisin-like Serine Gene Family AT5G45640 51.9 1.6e-173 606.7
Bda09g00832 . 1 629 Subtilisin-like Serine Gene Family AT5G45650 57.7 8.9e-204 707.2
Bda07g01841 . 23 782 Subtilisin-like Serine Gene Family AT5G51750 69.9 0.0e+00 1105.1
Bda11g01464 . 26 761 Subtilisin-like Serine Gene Family AT5G51750 52.7 7.6e-224 773.9
Bda08g01361 . 9 760 Subtilisin-like Serine Gene Family AT5G51750 51.3 2.7e-221 765.4
Bda02g00348 . 23 761 Subtilisin-like Serine Gene Family AT5G51750 50.3 2.4e-217 752.3
Bda02g00365 . 23 761 Subtilisin-like Serine Gene Family AT5G51750 50.3 3.1e-217 751.9
Bda13g00001 . 3 623 Subtilisin-like Serine Gene Family AT5G51750 50.9 5.0e-175 611.7
Bda09g00063 . 25 562 Subtilisin-like Serine Gene Family AT5G59190 50.2 6.5e-142 501.5
Bda01g01763 . 23 774 Subtilisin-like Serine Gene Family AT5G59810 63.6 1.8e-281 965.3
Bda07g00820 . 1 647 Subtilisin-like Serine Gene Family AT5G59810 68.0 8.3e-263 903.3
Bda11g01464 . 7 762 Subtilisin-like Serine Gene Family AT5G67360 71.9 0.0e+00 1097.0
Bda08g01361 . 10 761 Subtilisin-like Serine Gene Family AT5G67360 66.7 9.8e-293 1002.7
Bda01g01594 . 17 765 Subtilisin-like Serine Gene Family AT5G67360 61.8 5.4e-267 917.1
Bda02g00365 . 15 762 Subtilisin-like Serine Gene Family AT5G67360 56.2 1.7e-228 789.3
Bda02g00348 . 15 762 Subtilisin-like Serine Gene Family AT5G67360 56.2 2.2e-228 788.9
Bda07g01841 . 25 778 Subtilisin-like Serine Gene Family AT5G67360 54.7 2.9e-228 788.5
Bda01g01993 . 22 755 Subtilisin-like Serine Gene Family AT5G67360 56.8 7.9e-226 780.4
Bda10g00887 . 18 779 Subtilisin-like Serine Gene Family AT5G67360 51.4 4.4e-208 721.5
Bda05g00622 . 25 780 Subtilisin-like Serine Gene Family AT5G67360 50.3 1.1e-203 706.8
Bda14g01267 . 1 527 Subtilisin-like Serine Gene Family AT5G67360 53.4 1.3e-199 693.3
Bda13g00001 . 4 618 Subtilisin-like Serine Gene Family AT5G67360 54.7 7.0e-182 634.4
Bda10g00876 . 1 522 Subtilisin-like Serine Gene Family AT5G67360 53.7 1.2e-149 527.3
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0003250 2 4 2 3 2 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 1 4 1 1 46
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bda11g00106 Bda_Chr11 FPKM 1.532745 1.303307 3.145975 3.186581 2.860203 1.921358 2.301013 3.469782 2.944168